BLASTX nr result

ID: Cephaelis21_contig00012334 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00012334
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312730.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
gb|AAT39293.1| Putative F-box-like protein, identical [Solanum d...    61   8e-08
gb|AAU93581.1| Putative F-box protein, identical [Solanum demiss...    61   1e-07
gb|ABI34319.1| Putative F-box protein, identical [Solanum demissum]    60   2e-07
ref|XP_003528639.1| PREDICTED: F-box/kelch-repeat protein At3g06...    59   4e-07

>ref|XP_002312730.1| predicted protein [Populus trichocarpa] gi|222852550|gb|EEE90097.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 36/78 (46%), Positives = 47/78 (60%)
 Frame = -1

Query: 235 SNLHPNQPKRNRIDPHXXXXXXXXXXXXELDPLLIANLPKELIIEILSRLPAKSLGKFKC 56
           S+  P   ++ + + H            +  P  + NLP ELIIEILSRLPAKSL KF+C
Sbjct: 42  SSTSPGPSQKRQNNDHNLSPPQTNKKRTKKTPPPLPNLPHELIIEILSRLPAKSLIKFRC 101

Query: 55  VSRSWLSLISSRGFIKAH 2
           VS+S+ SLIS+  FIK H
Sbjct: 102 VSKSFKSLISNPQFIKTH 119


>gb|AAT39293.1| Putative F-box-like protein, identical [Solanum demissum]
          Length = 384

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 32/47 (68%), Positives = 35/47 (74%)
 Frame = -1

Query: 142 PLLIANLPKELIIEILSRLPAKSLGKFKCVSRSWLSLISSRGFIKAH 2
           PLL+  LP ELI EIL RLP KSL KF CVS+SWL LISS  F+K H
Sbjct: 8   PLLL--LPDELITEILLRLPIKSLSKFMCVSKSWLQLISSPAFVKNH 52


>gb|AAU93581.1| Putative F-box protein, identical [Solanum demissum]
           gi|142942419|gb|ABO92994.1| F-box domain-containing
           protein [Solanum tuberosum]
          Length = 383

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/48 (62%), Positives = 34/48 (70%)
 Frame = -1

Query: 145 DPLLIANLPKELIIEILSRLPAKSLGKFKCVSRSWLSLISSRGFIKAH 2
           D ++   LP ELI EIL RLP KSL KF CVS+SWL LISS  F+K H
Sbjct: 4   DSIIPLLLPDELITEILLRLPIKSLSKFMCVSKSWLQLISSPAFVKKH 51


>gb|ABI34319.1| Putative F-box protein, identical [Solanum demissum]
          Length = 386

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/47 (65%), Positives = 35/47 (74%)
 Frame = -1

Query: 142 PLLIANLPKELIIEILSRLPAKSLGKFKCVSRSWLSLISSRGFIKAH 2
           PLL+  LP ELI EIL +LP KSL KF CVS+SWL LISS  F+K H
Sbjct: 8   PLLL--LPDELITEILLKLPVKSLSKFMCVSKSWLQLISSPTFVKNH 52


>ref|XP_003528639.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Glycine max]
          Length = 375

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/41 (68%), Positives = 34/41 (82%)
 Frame = -1

Query: 124 LPKELIIEILSRLPAKSLGKFKCVSRSWLSLISSRGFIKAH 2
           LP+ELII+IL RLP KSL +FKCVS+SWLSLI+   F K+H
Sbjct: 18  LPQELIIQILLRLPVKSLLRFKCVSKSWLSLITDPHFAKSH 58


Top