BLASTX nr result

ID: Cephaelis21_contig00012283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00012283
         (1337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266319.2| PREDICTED: RING-H2 finger protein ATL7-like ...   175   3e-41
ref|XP_002521749.1| protein with unknown function [Ricinus commu...   170   9e-40
ref|XP_002872495.1| zinc finger family protein [Arabidopsis lyra...   157   8e-36
ref|NP_192753.1| RING-H2 finger protein ATL7 [Arabidopsis thalia...   157   8e-36
ref|XP_003605368.1| RING finger family protein [Medicago truncat...   156   1e-35

>ref|XP_002266319.2| PREDICTED: RING-H2 finger protein ATL7-like [Vitis vinifera]
           gi|297734760|emb|CBI16994.3| unnamed protein product
           [Vitis vinifera]
          Length = 221

 Score =  175 bits (443), Expect = 3e-41
 Identities = 98/174 (56%), Positives = 111/174 (63%)
 Frame = -3

Query: 942 SYSDPQETATSPTPPKESAELKLYQAFIXXXXXXXXXXXXXXXXXXXLRRRGVDWDSLRM 763
           SYSDP      P+    SAELKLYQAFI                   LRRR VDW SLRM
Sbjct: 4   SYSDP------PSCCSASAELKLYQAFIFSVPIFFTFILLLLFYLFYLRRRRVDWASLRM 57

Query: 762 RNXXXXXXXXXXXXSRAEMGLKKEVREMLPIIVFKESFSVNDTRCSVCLGDYQAEERLQQ 583
           R+              +E+GLKKEVREMLPIIVFKESFSV+DT+CSVCL DYQAE+RLQQ
Sbjct: 58  RSSMQNDADHASGV--SELGLKKEVREMLPIIVFKESFSVSDTQCSVCLADYQAEDRLQQ 115

Query: 582 IPACGHTFHMDCIDSWLSSHSTCPLCRQSLLVSAVKASRTEEVLVVQIENNHTT 421
           IPACGHTFHMDCID WL++H+TCPLCR SL  +   A    E L + +E  H T
Sbjct: 116 IPACGHTFHMDCIDHWLATHTTCPLCRLSLTAA---ARTPAEPLTILVETPHGT 166


>ref|XP_002521749.1| protein with unknown function [Ricinus communis]
           gi|223538962|gb|EEF40559.1| protein with unknown
           function [Ricinus communis]
          Length = 337

 Score =  170 bits (430), Expect = 9e-40
 Identities = 101/210 (48%), Positives = 120/210 (57%), Gaps = 3/210 (1%)
 Frame = -3

Query: 936 SDPQETATSPTPPKE--SAELKLYQAFIXXXXXXXXXXXXXXXXXXXLRRRGVDWDSLRM 763
           S P    + P+      S ELKLYQAFI                   LRRR VDW SLRM
Sbjct: 6   SQPPSCCSEPSSSSSVASTELKLYQAFIFSVPIFFTFVLLFLFYLFYLRRRRVDWASLRM 65

Query: 762 RNXXXXXXXXXXXXSRAEMGLKKEVREMLPIIVFKESFSVNDTRCSVCLGDYQAEERLQQ 583
           R              RAE+GLKKEVREMLPIIV+KESFSV DT+C VCLGDYQAE+RLQQ
Sbjct: 66  R----ANLQGSDNIFRAELGLKKEVREMLPIIVYKESFSVKDTQCPVCLGDYQAEDRLQQ 121

Query: 582 IPACGHTFHMDCIDSWLSSHSTCPLCRQSLLVSAVKASRTEEVLVVQIENNHTTLYA-DA 406
           IPACGHTFHM CID WL++H+TCPLCR SL+  A   + +      Q+E    +  A   
Sbjct: 122 IPACGHTFHMVCIDHWLANHTTCPLCRLSLVAPAKVPTESPN---NQVEAGQESFVAVSG 178

Query: 405 GETSPGNGPPXXXXXRSTIRGVLQYSRKNS 316
           GETS  +G        S  RG+ +   ++S
Sbjct: 179 GETSAQSGSGPGSCGESNSRGLSEPRNEDS 208


>ref|XP_002872495.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297318332|gb|EFH48754.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 237

 Score =  157 bits (396), Expect = 8e-36
 Identities = 87/179 (48%), Positives = 110/179 (61%), Gaps = 8/179 (4%)
 Frame = -3

Query: 945 ISYSDPQETAT----SPTPPKESAELKLYQAFIXXXXXXXXXXXXXXXXXXXLRRRG--- 787
           +SYSDP +       +P+   ES +LKLYQAFI                   LRR     
Sbjct: 1   MSYSDPNQNPIPETYAPSNSTESEKLKLYQAFIFSVPICFTFIVLFVLYVIYLRRNSTTN 60

Query: 786 VDWDSLRMRNXXXXXXXXXXXXSRAEMGLKKEVREMLPIIVFKESFSVNDTRCSVCLGDY 607
           VDW SL MR               AE+GL K+VREMLPI+++KESF+V D++CSVCL DY
Sbjct: 61  VDWSSLGMRGGIFVPTNNNLST--AELGLSKDVREMLPIVIYKESFTVKDSQCSVCLADY 118

Query: 606 QAEERLQQIPACGHTFHMDCIDSWLSSHSTCPLCRQSLLVS-AVKASRTEEVLVVQIEN 433
           QAEE+LQQ+PACGHTFHM+CID WL+SH+TCPLCR SL+   ++  S+    +V  IEN
Sbjct: 119 QAEEKLQQMPACGHTFHMECIDRWLTSHTTCPLCRLSLIPKPSLDLSQQTPEIVSPIEN 177


>ref|NP_192753.1| RING-H2 finger protein ATL7 [Arabidopsis thaliana]
           gi|68565338|sp|Q9SN28.1|ATL7_ARATH RecName: Full=RING-H2
           finger protein ATL7 gi|4538979|emb|CAB39767.1| putative
           protein [Arabidopsis thaliana]
           gi|7267711|emb|CAB78138.1| putative protein [Arabidopsis
           thaliana] gi|21689651|gb|AAM67447.1| unknown protein
           [Arabidopsis thaliana] gi|332657448|gb|AEE82848.1|
           RING-H2 finger protein ATL7 [Arabidopsis thaliana]
          Length = 236

 Score =  157 bits (396), Expect = 8e-36
 Identities = 85/181 (46%), Positives = 111/181 (61%), Gaps = 8/181 (4%)
 Frame = -3

Query: 945 ISYSDPQETAT----SPTPPKESAELKLYQAFIXXXXXXXXXXXXXXXXXXXLRRRG--- 787
           +SYSDP +       +P+   ES +LKLYQAFI                   LRR     
Sbjct: 1   MSYSDPNQNPIPETYAPSNSTESEKLKLYQAFIFSVPICFTFIVLFVLYVIYLRRNSTTN 60

Query: 786 VDWDSLRMRNXXXXXXXXXXXXSRAEMGLKKEVREMLPIIVFKESFSVNDTRCSVCLGDY 607
           VDW SL MR               AE+GL K++REMLP++++KESF V D++CSVCLGDY
Sbjct: 61  VDWSSLGMRGGTFVPTNNNLST--AELGLSKDIREMLPVVIYKESFIVKDSQCSVCLGDY 118

Query: 606 QAEERLQQIPACGHTFHMDCIDSWLSSHSTCPLCRQSLLVS-AVKASRTEEVLVVQIENN 430
           QAEE+LQQ+P+CGHTFHM+CID WL+SH+TCPLCR SL+   ++  S     +V  IEN+
Sbjct: 119 QAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCRLSLIPKPSLDLSHQSTEIVSSIENS 178

Query: 429 H 427
           +
Sbjct: 179 N 179


>ref|XP_003605368.1| RING finger family protein [Medicago truncatula]
           gi|355506423|gb|AES87565.1| RING finger family protein
           [Medicago truncatula]
          Length = 226

 Score =  156 bits (394), Expect = 1e-35
 Identities = 82/146 (56%), Positives = 97/146 (66%), Gaps = 1/146 (0%)
 Frame = -3

Query: 888 AELKLYQAFIXXXXXXXXXXXXXXXXXXXLRRRGVDWDSLRMRNXXXXXXXXXXXXSR-A 712
           AELKLY+AFI                   LR R VDW S+RMR+            +  +
Sbjct: 23  AELKLYRAFIFSVPIFFTLILLFLFYVFYLRPRRVDWSSIRMRSVSVLQHHHNNNATSTS 82

Query: 711 EMGLKKEVREMLPIIVFKESFSVNDTRCSVCLGDYQAEERLQQIPACGHTFHMDCIDSWL 532
           ++GLKKE+REMLPIIV+ ESFSV DT+CSVCL DYQ E+RLQQIPACGHTFHM CID WL
Sbjct: 83  DLGLKKELREMLPIIVYNESFSVKDTQCSVCLLDYQPEDRLQQIPACGHTFHMSCIDLWL 142

Query: 531 SSHSTCPLCRQSLLVSAVKASRTEEV 454
           SSHSTCPLCR SLL +A  ++   E+
Sbjct: 143 SSHSTCPLCRLSLLPTAKSSTEISEM 168


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