BLASTX nr result

ID: Cephaelis21_contig00012075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00012075
         (1064 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234047.1| COP1 homolog [Solanum lycopersicum] gi|40909...   314   e-106
ref|XP_002271415.1| PREDICTED: E3 ubiquitin-protein ligase COP1 ...   313   e-104
emb|CAN71084.1| hypothetical protein VITISV_028588 [Vitis vinifera]   313   e-104
ref|XP_002534127.1| ubiquitin ligase protein cop1, putative [Ric...   306   e-103
ref|XP_002270330.2| PREDICTED: E3 ubiquitin-protein ligase COP1-...   310   e-103

>ref|NP_001234047.1| COP1 homolog [Solanum lycopersicum] gi|4090943|gb|AAC98912.1| COP1
            homolog [Solanum lycopersicum]
          Length = 677

 Score =  314 bits (805), Expect(2) = e-106
 Identities = 150/163 (92%), Positives = 159/163 (97%)
 Frame = -1

Query: 1064 QSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTKQEASVLNIDMKANICCVKY 885
            QSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTKQEASVLNIDMKANICCVKY
Sbjct: 456  QSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTKQEASVLNIDMKANICCVKY 515

Query: 884  NPGSSIYIAVGSADHHIHYYDLRNTSSPFHIFSGHKKAVSYVKFLSNNELASASTDSTLR 705
            NPGSS++IAVGSADHHIHYYDLRNTS P HIFSGH+KAVSYVKFLSNNELASASTDSTLR
Sbjct: 516  NPGSSVHIAVGSADHHIHYYDLRNTSQPVHIFSGHRKAVSYVKFLSNNELASASTDSTLR 575

Query: 704  LWDVEESLPVRTYRGGHTNEKNFVGLTVNNEFIACGSETNEVF 576
            LWDV+++LPVRT R GHTNEKNFVGL+VNNEF++CGSETNEVF
Sbjct: 576  LWDVKDNLPVRTLR-GHTNEKNFVGLSVNNEFLSCGSETNEVF 617



 Score = 98.2 bits (243), Expect(2) = e-106
 Identities = 44/56 (78%), Positives = 51/56 (91%)
 Frame = -3

Query: 489 AIARPVTWHKFGSPAVDDTDEDPGSSFISAVCWKSDAPTMLAANSQGTIKVLLLGA 322
           AI++PVTWH+FGSP +D+ DED GS FISAVCWKSD+PTMLAANSQGTIKVL+L A
Sbjct: 622 AISKPVTWHRFGSPDIDEADEDAGSYFISAVCWKSDSPTMLAANSQGTIKVLVLAA 677


>ref|XP_002271415.1| PREDICTED: E3 ubiquitin-protein ligase COP1 [Vitis vinifera]
            gi|297739218|emb|CBI28869.3| unnamed protein product
            [Vitis vinifera]
          Length = 676

 Score =  313 bits (801), Expect(2) = e-104
 Identities = 150/163 (92%), Positives = 158/163 (96%)
 Frame = -1

Query: 1064 QSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTKQEASVLNIDMKANICCVKY 885
            QSVMEYEEHEKRAWSVDFSRTEPS LVSGSDDCKVKVWCT QEASVLNIDMKANICCVKY
Sbjct: 455  QSVMEYEEHEKRAWSVDFSRTEPSRLVSGSDDCKVKVWCTNQEASVLNIDMKANICCVKY 514

Query: 884  NPGSSIYIAVGSADHHIHYYDLRNTSSPFHIFSGHKKAVSYVKFLSNNELASASTDSTLR 705
            NPGSSIYIAVGSADHHIHYYDLRNTS P HIFSGHKKAVSYVKFLSNNELASASTDSTLR
Sbjct: 515  NPGSSIYIAVGSADHHIHYYDLRNTSHPLHIFSGHKKAVSYVKFLSNNELASASTDSTLR 574

Query: 704  LWDVEESLPVRTYRGGHTNEKNFVGLTVNNEFIACGSETNEVF 576
            LWDV+E+LPVRT+R GHTNEKNFVGL+VN+E+I+CGSETN+VF
Sbjct: 575  LWDVKENLPVRTFR-GHTNEKNFVGLSVNSEYISCGSETNDVF 616



 Score = 93.6 bits (231), Expect(2) = e-104
 Identities = 43/55 (78%), Positives = 47/55 (85%)
 Frame = -3

Query: 486 IARPVTWHKFGSPAVDDTDEDPGSSFISAVCWKSDAPTMLAANSQGTIKVLLLGA 322
           I++PVTWHKFGSP VDD D+D G  FISAVCWKSD+PTML ANSQGTIKVL L A
Sbjct: 622 ISKPVTWHKFGSPDVDDLDDDVGPYFISAVCWKSDSPTMLTANSQGTIKVLTLSA 676


>emb|CAN71084.1| hypothetical protein VITISV_028588 [Vitis vinifera]
          Length = 676

 Score =  313 bits (801), Expect(2) = e-104
 Identities = 150/163 (92%), Positives = 158/163 (96%)
 Frame = -1

Query: 1064 QSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTKQEASVLNIDMKANICCVKY 885
            QSVMEYEEHEKRAWSVDFSRTEPS LVSGSDDCKVKVWCT QEASVLNIDMKANICCVKY
Sbjct: 455  QSVMEYEEHEKRAWSVDFSRTEPSRLVSGSDDCKVKVWCTNQEASVLNIDMKANICCVKY 514

Query: 884  NPGSSIYIAVGSADHHIHYYDLRNTSSPFHIFSGHKKAVSYVKFLSNNELASASTDSTLR 705
            NPGSSIYIAVGSADHHIHYYDLRNTS P HIFSGHKKAVSYVKFLSNNELASASTDSTLR
Sbjct: 515  NPGSSIYIAVGSADHHIHYYDLRNTSHPLHIFSGHKKAVSYVKFLSNNELASASTDSTLR 574

Query: 704  LWDVEESLPVRTYRGGHTNEKNFVGLTVNNEFIACGSETNEVF 576
            LWDV+E+LPVRT+R GHTNEKNFVGL+VN+E+I+CGSETN+VF
Sbjct: 575  LWDVKENLPVRTFR-GHTNEKNFVGLSVNSEYISCGSETNDVF 616



 Score = 93.6 bits (231), Expect(2) = e-104
 Identities = 43/55 (78%), Positives = 47/55 (85%)
 Frame = -3

Query: 486 IARPVTWHKFGSPAVDDTDEDPGSSFISAVCWKSDAPTMLAANSQGTIKVLLLGA 322
           I++PVTWHKFGSP VDD D+D G  FISAVCWKSD+PTML ANSQGTIKVL L A
Sbjct: 622 ISKPVTWHKFGSPDVDDLDDDVGPYFISAVCWKSDSPTMLTANSQGTIKVLTLSA 676


>ref|XP_002534127.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
            gi|223525812|gb|EEF28255.1| ubiquitin ligase protein
            cop1, putative [Ricinus communis]
          Length = 677

 Score =  306 bits (785), Expect(2) = e-103
 Identities = 146/163 (89%), Positives = 156/163 (95%)
 Frame = -1

Query: 1064 QSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTKQEASVLNIDMKANICCVKY 885
            QSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCT QEASVLNIDMKANICCVKY
Sbjct: 456  QSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTNQEASVLNIDMKANICCVKY 515

Query: 884  NPGSSIYIAVGSADHHIHYYDLRNTSSPFHIFSGHKKAVSYVKFLSNNELASASTDSTLR 705
            NPGSS YIAVGSADHHIHYYDLRN S P H+FSGH+KAVSYVKFLSN+ELASASTDSTLR
Sbjct: 516  NPGSSNYIAVGSADHHIHYYDLRNVSHPLHVFSGHRKAVSYVKFLSNSELASASTDSTLR 575

Query: 704  LWDVEESLPVRTYRGGHTNEKNFVGLTVNNEFIACGSETNEVF 576
            LWDV+E+LPVRT+R GHTNEKNFVGL+VN ++IACGSETNEV+
Sbjct: 576  LWDVKENLPVRTFR-GHTNEKNFVGLSVNRDYIACGSETNEVY 617



 Score = 97.4 bits (241), Expect(2) = e-103
 Identities = 44/55 (80%), Positives = 49/55 (89%)
 Frame = -3

Query: 486 IARPVTWHKFGSPAVDDTDEDPGSSFISAVCWKSDAPTMLAANSQGTIKVLLLGA 322
           I+RPVTWH+FGSP +DD DED GS FISAVCWKSD+PTML ANSQGTIKVL+L A
Sbjct: 623 ISRPVTWHRFGSPEMDDADEDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 677


>ref|XP_002270330.2| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Vitis vinifera]
          Length = 687

 Score =  310 bits (795), Expect(2) = e-103
 Identities = 147/163 (90%), Positives = 158/163 (96%)
 Frame = -1

Query: 1064 QSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTKQEASVLNIDMKANICCVKY 885
            QSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVK+WCTKQEASVLNIDMKANIC VKY
Sbjct: 466  QSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKIWCTKQEASVLNIDMKANICSVKY 525

Query: 884  NPGSSIYIAVGSADHHIHYYDLRNTSSPFHIFSGHKKAVSYVKFLSNNELASASTDSTLR 705
            NPGSSIY+AVGSADHHIHYYDLRN S P H+FSGH+KAVSYVKFLSNNELASASTDSTLR
Sbjct: 526  NPGSSIYVAVGSADHHIHYYDLRNISQPLHVFSGHRKAVSYVKFLSNNELASASTDSTLR 585

Query: 704  LWDVEESLPVRTYRGGHTNEKNFVGLTVNNEFIACGSETNEVF 576
            LWDV+E++PVRT+R GH+NEKNFVGLTVN+E+IACGSETNEVF
Sbjct: 586  LWDVKENMPVRTFR-GHSNEKNFVGLTVNSEYIACGSETNEVF 627



 Score = 91.3 bits (225), Expect(2) = e-103
 Identities = 41/56 (73%), Positives = 48/56 (85%)
 Frame = -3

Query: 489 AIARPVTWHKFGSPAVDDTDEDPGSSFISAVCWKSDAPTMLAANSQGTIKVLLLGA 322
           AI++P  WH+FGS  +DDTD+D GS FISAVCWKSD+PTML ANSQGTIKVL+L A
Sbjct: 632 AISKPAAWHRFGSSDLDDTDDDNGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA 687


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