BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00012056
         (2573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]      1102   0.0  
gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa...  1097   0.0  
gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tu...  1083   0.0  
ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycoper...  1075   0.0  
gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tu...  1075   0.0  

>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
          Length = 1116

 Score = 1102 bits (2849), Expect = 0.0
 Identities = 549/807 (68%), Positives = 655/807 (81%), Gaps = 6/807 (0%)
 Frame = +2

Query: 170  MGKTIRVSGFPYVLSADVVTRFLEQSTGQETVYALEVKRCKTGRRAYATVQFIDIRSAEL 349
            MGKTI+V GFPY+LSA+ V +FLE  TG  TVYALEVK+ K GRRA+A VQF + +SAE 
Sbjct: 1    MGKTIQVFGFPYLLSAEAVKKFLENHTGNGTVYALEVKQSKGGRRAFAKVQFANNKSAEF 60

Query: 350  IISLAQQRLYYGSSYLRAWEMPADIVPRPRNFVHQMEQIVLSFGCQVSKNKFSVLWKKEN 529
            II LA + LYYG SYL+AWEM  DIV +PR +V  M+ + L+FGCQ+S  KF+VL  K+ 
Sbjct: 61   IIDLASKGLYYGPSYLKAWEMKTDIV-QPRTYVEHMDGVTLNFGCQISDKKFAVLGSKD- 118

Query: 530  VSVXXXXXXXXXXXXXXXXSVDYKLELSYESFWQLILYCPRGQASKLLLIQLFGAPRIFK 709
            VS+                S DYKL+LSYE+ WQ++L+ P GQ ++ LL+QLFGAPRI+K
Sbjct: 119  VSIKFGIGLKKIYFFLSHASADYKLQLSYENIWQVVLHRPYGQNAQFLLLQLFGAPRIYK 178

Query: 710  RIEESAFSYFKETPDDQWVRTTDFTPSCIGQSSGICLELPRGVQIPNFSDYFAWYKESES 889
            R+E+S +S+FKETPDDQWVRTTDFTPS IG SS +CLE   GVQ+PNFS+ F +YKES +
Sbjct: 179  RLEDSCYSFFKETPDDQWVRTTDFTPSWIGLSSSLCLEFRNGVQLPNFSESFFYYKESMN 238

Query: 890  QFILETCSPYSYNK--VLVPILRPPQGVELPYKILFRICCLVQTGCLPGPSLDEYFFQLV 1063
            QFIL+T   +S+++   LVPI+  P+G+ELPYKILF+I  L+Q GC PG +L+  FFQLV
Sbjct: 239  QFILQTGFTFSFSQKLALVPIVHLPEGIELPYKILFKISSLIQHGCFPGLALNFNFFQLV 298

Query: 1064 DPQRINIGFIEHALENMYNLKECCYAPVQWLAEQYNXXXXXXXXXXXXTIALDDGLVYIR 1243
            DP+R NI  IEHALE +Y LKECCY PV+WL EQY+             I LDDGLVY+R
Sbjct: 299  DPRRRNIACIEHALEKLYYLKECCYDPVRWLTEQYDEYLKGRQLPKSPPITLDDGLVYVR 358

Query: 1244 RVQVTPCKVYFCGPEVNVSNRVLRNFQGDIDNFLRVSFIDEEWNKMFSTDLVPR-NVPNG 1420
            RV VTPCKVYFCGPEVNVSNRVLRN+  DI+NFLRVSF+DEEW K+ STDL+PR +  NG
Sbjct: 359  RVVVTPCKVYFCGPEVNVSNRVLRNYSEDINNFLRVSFVDEEWEKIHSTDLLPRASTGNG 418

Query: 1421 -RTEIYHRILSTLKNGIVIGNKKFEFLAFSSSQLRDNSVWMFASRPGLSAADIRAWMGDF 1597
             RT+IY RILSTL+NG +IG+K+FEFLAFSSSQLRDNSVWMFASRPGL+A DIR WMGDF
Sbjct: 419  TRTDIYERILSTLRNGFIIGDKRFEFLAFSSSQLRDNSVWMFASRPGLTANDIRTWMGDF 478

Query: 1598 GSIRNVAKYAARLGQSFSSSKETLTVDRHEIEMIPDIVVGAT-SNYVFSDGIGKISAEFA 1774
              IRNVAKYAARLGQSF SS+ETL+V RHE+E+IPD+      +NY+FSDGIGKISA+FA
Sbjct: 479  RQIRNVAKYAARLGQSFGSSRETLSVGRHEVEVIPDVACSLHGTNYIFSDGIGKISADFA 538

Query: 1775 QRVAVKCGLKKFTPSAFQIRYGGFKGVVAVDPASSKKLSLRPSMKKYDSNNTKLDVLAWS 1954
             RV +KCGL+ +TPS+FQIRYGG+KGVVAVDP SS KLSLR SM KY+SNN KLDVL WS
Sbjct: 539  HRVTIKCGLQ-YTPSSFQIRYGGYKGVVAVDPYSSMKLSLRKSMLKYESNNIKLDVLGWS 597

Query: 1955 KYQPCFLNRQLISLLSTLGVNDHVFERKQREAIAQLDGILTDPLRAREALELMSPGENTN 2134
            KYQPC+LNRQL++LLSTLGV D V E+KQ EA+ QLD IL D L+A+EALELMSPGENTN
Sbjct: 598  KYQPCYLNRQLVTLLSTLGVIDDVLEQKQNEAVDQLDAILHDSLKAQEALELMSPGENTN 657

Query: 2135 ILKEILKCGYKPDSEPFLSMMLQTFRASKLLDLRTKARIFVPQGRSMIGCLDETRTLEYG 2314
            ILKE+L CGY PD+EPFLSMMLQTFRASKLLDLRT+ RIF+P GR+M+GCLDE+RTLEYG
Sbjct: 658  ILKEMLNCGYMPDAEPFLSMMLQTFRASKLLDLRTRTRIFIPNGRTMMGCLDESRTLEYG 717

Query: 2315 QVFIQCSSAGRRQFYEDFHLY-DSSDSEYNFILEGTVVVAKNPCLHPGDVRILRAVNLPA 2491
            QVF+Q S AGRRQF+E+ H + DS  +  +FIL+G VVVAKNPCLHPGD+R+LRAV++PA
Sbjct: 718  QVFVQFSGAGRRQFFEESHPFNDSGSANCDFILKGNVVVAKNPCLHPGDIRVLRAVDVPA 777

Query: 2492 LHHMVDCVVFPQKGRRPHPNECSGSDL 2572
            LHHMVDCVVFPQKG+RPHPNECSGSDL
Sbjct: 778  LHHMVDCVVFPQKGKRPHPNECSGSDL 804


>gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa]
            gi|209420668|gb|ACI46982.1| RNA-dependent RNA polymerase
            [Nicotiana glutinosa]
          Length = 1117

 Score = 1097 bits (2837), Expect = 0.0
 Identities = 551/808 (68%), Positives = 654/808 (80%), Gaps = 7/808 (0%)
 Frame = +2

Query: 170  MGKTIRVSGFPYVLSADVVTRFLEQSTGQETVYALEVKRCKTGRRAYATVQFIDIRSAEL 349
            MGKTI+V GFPY+LSA+ V  FLE  TG  TVYALEVK+ K GRRA+A VQF + +SAE+
Sbjct: 1    MGKTIQVFGFPYLLSAEAVKTFLENHTGNGTVYALEVKQSKGGRRAFAKVQFANNKSAEI 60

Query: 350  IISLAQQRLYYGSSYLRAWEMPADIVPRPRNFVHQMEQIVLSFGCQVSKNKFSVLWKKEN 529
            II LA + LYYG SYL+AWEM   IV +PR +V  M+ + L+FGCQ+S  KF+VL  K  
Sbjct: 61   IIDLASKGLYYGPSYLKAWEMKTYIV-QPRTYVQHMDGVTLNFGCQISDKKFAVLGSKV- 118

Query: 530  VSVXXXXXXXXXXXXXXXXSVDYKLELSYESFWQLILYCPRGQASKLLLIQLFGAPRIFK 709
            VS+                S DYKL+LSYE+ WQ++L+ P GQ ++ LL+QL GAPRI+K
Sbjct: 119  VSIKFGIGLKKIYFFLSYGSTDYKLQLSYENIWQVVLHRPYGQKAQFLLLQLSGAPRIYK 178

Query: 710  RIEESAFSYFKETPDDQWVRTTDFTPSCIGQSSGICLELPRGVQIPNFSDYFAWYKESES 889
            R+E+S +S+FKETPDDQWVRTTDFTPS IG SS +CLE   GV++PNFS+ F +YKES +
Sbjct: 179  RLEDSCYSFFKETPDDQWVRTTDFTPSWIGLSSSLCLEFHNGVRLPNFSESFFYYKESAN 238

Query: 890  QFILETCSPYSYNK---VLVPILRPPQGVELPYKILFRICCLVQTGCLPGPSLDEYFFQL 1060
            Q IL+T   +S+++    LVPI+  P+G+ELPYKILF+I  L+Q GC PG +L+  FFQL
Sbjct: 239  QVILQTGFTFSFSQKKLALVPIVHLPEGIELPYKILFKISSLIQHGCFPGLALNFNFFQL 298

Query: 1061 VDPQRINIGFIEHALENMYNLKECCYAPVQWLAEQYNXXXXXXXXXXXXTIALDDGLVYI 1240
            VDP+R NI  IEHALE +Y LKECCY PV+WL EQY+            +I LDDGLVY+
Sbjct: 299  VDPRRRNIACIEHALEKLYYLKECCYDPVRWLTEQYDEYLKRRQLPKSPSITLDDGLVYV 358

Query: 1241 RRVQVTPCKVYFCGPEVNVSNRVLRNFQGDIDNFLRVSFIDEEWNKMFSTDLVPR-NVPN 1417
            RRV VTPCKVYFCGPEVNVSNRVLRN+  DIDNFLRVSF+DEEW K+ STDL+PR +  N
Sbjct: 359  RRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDNFLRVSFVDEEWEKIHSTDLLPRASTGN 418

Query: 1418 G-RTEIYHRILSTLKNGIVIGNKKFEFLAFSSSQLRDNSVWMFASRPGLSAADIRAWMGD 1594
            G RT+IY RILSTL+NG VIG+KKFEFLAFSSSQLRDNSVWMFASRPGL+A DIR WMG 
Sbjct: 419  GVRTDIYLRILSTLRNGFVIGDKKFEFLAFSSSQLRDNSVWMFASRPGLTANDIRTWMGG 478

Query: 1595 FGSIRNVAKYAARLGQSFSSSKETLTVDRHEIEMIPDIVVGAT-SNYVFSDGIGKISAEF 1771
            F  IRNVAKYAARLGQSF SS+ETL+V RHE+E+IPD+V     +NY+FSDGIGKISA+F
Sbjct: 479  FQQIRNVAKYAARLGQSFGSSRETLSVGRHEVEVIPDVVCSLHGTNYIFSDGIGKISADF 538

Query: 1772 AQRVAVKCGLKKFTPSAFQIRYGGFKGVVAVDPASSKKLSLRPSMKKYDSNNTKLDVLAW 1951
            A+RVAVKCGL+ +TPS FQIRYGG+KGVVAVDP SS KLSLR SM KY+SNN KLDVL W
Sbjct: 539  ARRVAVKCGLQ-YTPSCFQIRYGGYKGVVAVDPYSSMKLSLRNSMLKYESNNIKLDVLGW 597

Query: 1952 SKYQPCFLNRQLISLLSTLGVNDHVFERKQREAIAQLDGILTDPLRAREALELMSPGENT 2131
            SKYQPC+LNRQL++LLSTLGV D VFE+KQ EA+ QLD IL D L+A+EALELMSPGENT
Sbjct: 598  SKYQPCYLNRQLVTLLSTLGVKDDVFEQKQNEAVDQLDAILHDTLKAQEALELMSPGENT 657

Query: 2132 NILKEILKCGYKPDSEPFLSMMLQTFRASKLLDLRTKARIFVPQGRSMIGCLDETRTLEY 2311
            NILKE+L CGY PD+EPFLSMMLQTFRASKLLDLRT++RIF+P GR+M+GCLDE+RTLEY
Sbjct: 658  NILKEMLNCGYMPDAEPFLSMMLQTFRASKLLDLRTRSRIFIPNGRTMMGCLDESRTLEY 717

Query: 2312 GQVFIQCSSAGRRQFYEDFHLY-DSSDSEYNFILEGTVVVAKNPCLHPGDVRILRAVNLP 2488
            GQVF+Q +  GRRQFYE+ H + DS  +  +FILEG VVVAKNPCLHPGD+R+LRAV++P
Sbjct: 718  GQVFVQFTGTGRRQFYEESHPFNDSGSTNCDFILEGNVVVAKNPCLHPGDIRVLRAVDVP 777

Query: 2489 ALHHMVDCVVFPQKGRRPHPNECSGSDL 2572
            ALHHMVDCVVFPQKG+RPHPNECSGSDL
Sbjct: 778  ALHHMVDCVVFPQKGKRPHPNECSGSDL 805


>gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 841

 Score = 1083 bits (2802), Expect = 0.0
 Identities = 546/806 (67%), Positives = 649/806 (80%), Gaps = 5/806 (0%)
 Frame = +2

Query: 170  MGKTIRVSGFPYVLSADVVTRFLEQSTGQETVYALEVKRCKTGRRAYATVQFIDIRSAEL 349
            MGKTI+V GFPY+LSA+VV  FLE+ TG  TV ALEVK+ K G RA+A VQF+D  SA+ 
Sbjct: 1    MGKTIQVYGFPYLLSAEVVKSFLEKHTGYGTVCALEVKQSKGGSRAFAKVQFVDNISADK 60

Query: 350  IISLAQQRLYYGSSYLRAWEMPADIVPRPRNFVHQMEQIVLSFGCQVSKNKFSVLWKKEN 529
            II+LA +RLY+GSSYL+AWEM  DIV + R +V  M+ I L+FGCQ+S +KF+VL   E 
Sbjct: 61   IINLASKRLYFGSSYLKAWEMKTDIV-QLRAYVDHMDGITLNFGCQISDDKFAVLGSTE- 118

Query: 530  VSVXXXXXXXXXXXXXXXXSVDYKLELSYESFWQLILYCPRGQASKLLLIQLFGAPRIFK 709
            VS+                S DYKL+LSYE+ WQ++L+ P GQ ++ LLIQLFGAPRI+K
Sbjct: 119  VSIKFGIGLKKFFFFLSSGSADYKLQLSYENIWQVVLHRPYGQNAQFLLIQLFGAPRIYK 178

Query: 710  RIEESAFSYFKETPDDQWVRTTDFTPSCIGQSSGICLELPRGVQIPNFSDYFAWYKESES 889
            R+E S +S+FKETPDDQWVRTTDF PS IG SS +CL+  RGV +PNF + F  Y E E+
Sbjct: 179  RLENSCYSFFKETPDDQWVRTTDFAPSWIGLSSSLCLQFRRGVHLPNFQESFFHYTEREN 238

Query: 890  QFILETCSPY--SYNKVLVPILRPPQGVELPYKILFRICCLVQTGCLPGPSLDEYFFQLV 1063
               L+T   +  S    LVP ++PP+G+ +PYKILF+I  LVQ GC+PGP+L+ YFF+LV
Sbjct: 239  NITLQTGFTFFVSQKSALVPNVQPPEGIAIPYKILFKISSLVQHGCIPGPALNVYFFRLV 298

Query: 1064 DPQRINIGFIEHALENMYNLKECCYAPVQWLAEQYNXXXXXXXXXXXXTIALDDGLVYIR 1243
            DPQR N+  IE ALE +Y LKECCY PV+WL EQY+            +I LDDGLVY+R
Sbjct: 299  DPQRRNVACIEQALEKLYYLKECCYDPVRWLTEQYDGYLKGRQPPKSPSITLDDGLVYVR 358

Query: 1244 RVQVTPCKVYFCGPEVNVSNRVLRNFQGDIDNFLRVSFIDEEWNKMFSTDLVPR-NVPNG 1420
            RV VTPCKVYFCGPEVNVSNRVLRN+  DIDNFLRVSF+DEEW K++STDL+P+ +  NG
Sbjct: 359  RVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDNFLRVSFVDEEWEKLYSTDLLPKASTGNG 418

Query: 1421 -RTEIYHRILSTLKNGIVIGNKKFEFLAFSSSQLRDNSVWMFASRPGLSAADIRAWMGDF 1597
             RT IY RILSTL+ G VIG+KKFEFLAFSSSQLRDNSVWMFASRPGL+A DIR WMGDF
Sbjct: 419  IRTNIYERILSTLRKGFVIGDKKFEFLAFSSSQLRDNSVWMFASRPGLTANDIRTWMGDF 478

Query: 1598 GSIRNVAKYAARLGQSFSSSKETLTVDRHEIEMIPDIVVGATSNYVFSDGIGKISAEFAQ 1777
              I+NVAKYAARLGQSF SSKETL+V RHEIE+IPD+ V  TS YVFSDGIGKISA+FA+
Sbjct: 479  SQIKNVAKYAARLGQSFGSSKETLSVLRHEIEVIPDVKVHGTS-YVFSDGIGKISADFAR 537

Query: 1778 RVAVKCGLKKFTPSAFQIRYGGFKGVVAVDPASSKKLSLRPSMKKYDSNNTKLDVLAWSK 1957
            RVA KCGL+ +TPSAFQIRYGG+KGVVAVDP SS KLSLR SM KY+S+N KLDVL WSK
Sbjct: 538  RVASKCGLQ-YTPSAFQIRYGGYKGVVAVDPYSSMKLSLRKSMSKYESDNNKLDVLGWSK 596

Query: 1958 YQPCFLNRQLISLLSTLGVNDHVFERKQREAIAQLDGILTDPLRAREALELMSPGENTNI 2137
            YQPC+LNRQL++LLSTLGV D V E+KQ+EA+ QLD IL D L+A+EALELMSPGENTNI
Sbjct: 597  YQPCYLNRQLVTLLSTLGVKDDVLEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNI 656

Query: 2138 LKEILKCGYKPDSEPFLSMMLQTFRASKLLDLRTKARIFVPQGRSMIGCLDETRTLEYGQ 2317
            LK +L CGY PD+EPFLSMMLQTFRASKLLDLRT++RIF+P GR+M+GCLDE+RTLEYGQ
Sbjct: 657  LKAMLNCGYMPDAEPFLSMMLQTFRASKLLDLRTRSRIFIPNGRAMMGCLDESRTLEYGQ 716

Query: 2318 VFIQCSSAGRRQFYEDFHLYDSSDS-EYNFILEGTVVVAKNPCLHPGDVRILRAVNLPAL 2494
            VF+Q + AG R+F ED H +++S S   NFIL+G VVVAKNPCLHPGD+R+LRAV++PAL
Sbjct: 717  VFVQFTGAGHREFSEDLHPFNNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPAL 776

Query: 2495 HHMVDCVVFPQKGRRPHPNECSGSDL 2572
            HHMVDCVVFPQKG+RPHPNECSGSDL
Sbjct: 777  HHMVDCVVFPQKGKRPHPNECSGSDL 802


>ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycopersicum]
            gi|4038592|emb|CAA71421.1| RNA-directed RNA polymerase
            [Solanum lycopersicum]
          Length = 1114

 Score = 1075 bits (2781), Expect = 0.0
 Identities = 541/806 (67%), Positives = 644/806 (79%), Gaps = 5/806 (0%)
 Frame = +2

Query: 170  MGKTIRVSGFPYVLSADVVTRFLEQSTGQETVYALEVKRCKTGRRAYATVQFIDIRSAEL 349
            MGKTI+V GFPY+LSA+VV  FLE+ TG  TV ALEVK+ K G RA+A VQF D  SA+ 
Sbjct: 1    MGKTIQVFGFPYLLSAEVVKSFLEKYTGYGTVCALEVKQSKGGSRAFAKVQFADNISADK 60

Query: 350  IISLAQQRLYYGSSYLRAWEMPADIVPRPRNFVHQMEQIVLSFGCQVSKNKFSVLWKKEN 529
            II+LA  RLY+GSSYL+AWEM  DIV + R +V QM+ I L+FGCQ+S +KF+VL   E 
Sbjct: 61   IITLANNRLYFGSSYLKAWEMKTDIV-QLRAYVDQMDGITLNFGCQISDDKFAVLGSTE- 118

Query: 530  VSVXXXXXXXXXXXXXXXXSVDYKLELSYESFWQLILYCPRGQASKLLLIQLFGAPRIFK 709
            VS+                S DYKL+LSYE+ WQ++L+ P GQ ++ LLIQLFGAPRI+K
Sbjct: 119  VSIQFGIGLKKFFFFLSSGSADYKLQLSYENIWQVVLHRPYGQNAQFLLIQLFGAPRIYK 178

Query: 710  RIEESAFSYFKETPDDQWVRTTDFTPSCIGQSSGICLELPRGVQIPNFSDYFAWYKESES 889
            R+E S +S+FKETPDDQWVRTTDF PS IG SS +CL+  RGV++PNF + F  Y E E+
Sbjct: 179  RLENSCYSFFKETPDDQWVRTTDFPPSWIGLSSSLCLQFRRGVRLPNFEESFFHYAEREN 238

Query: 890  QFILETCSPY--SYNKVLVPILRPPQGVELPYKILFRICCLVQTGCLPGPSLDEYFFQLV 1063
               L+T   +  S    LVP ++PP+G+ +PYKILF+I  LVQ GC+PGP+L+ YFF+LV
Sbjct: 239  NITLQTGFTFFVSQKSALVPNVQPPEGISIPYKILFKISSLVQHGCIPGPALNVYFFRLV 298

Query: 1064 DPQRINIGFIEHALENMYNLKECCYAPVQWLAEQYNXXXXXXXXXXXXTIALDDGLVYIR 1243
            DP+R N+  IEHALE +Y +KECCY PV+WL EQY+            +I LDDGLVY+R
Sbjct: 299  DPRRRNVACIEHALEKLYYIKECCYDPVRWLTEQYDGYLKGRQPPKSPSITLDDGLVYVR 358

Query: 1244 RVQVTPCKVYFCGPEVNVSNRVLRNFQGDIDNFLRVSFIDEEWNKMFSTDLVPRNVPNG- 1420
            RV VTPCKVYFCGPEVNVSNRVLRN+  DIDNFLRVSF+DEEW K++STDL+P+      
Sbjct: 359  RVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDNFLRVSFVDEEWEKLYSTDLLPKASTGSG 418

Query: 1421 -RTEIYHRILSTLKNGIVIGNKKFEFLAFSSSQLRDNSVWMFASRPGLSAADIRAWMGDF 1597
             RT IY RILSTL+ G VIG+KKFEFLAFSSSQLRDNSVWMFASRPGL+A DIRAWMGDF
Sbjct: 419  VRTNIYERILSTLRKGFVIGDKKFEFLAFSSSQLRDNSVWMFASRPGLTANDIRAWMGDF 478

Query: 1598 GSIRNVAKYAARLGQSFSSSKETLTVDRHEIEMIPDIVVGATSNYVFSDGIGKISAEFAQ 1777
              I+NVAKYAARLGQSF SS+ETL+V RHEIE+IPD+ V  TS YVFSDGIGKIS +FA 
Sbjct: 479  SQIKNVAKYAARLGQSFGSSRETLSVLRHEIEVIPDVKVHGTS-YVFSDGIGKISGDFAH 537

Query: 1778 RVAVKCGLKKFTPSAFQIRYGGFKGVVAVDPASSKKLSLRPSMKKYDSNNTKLDVLAWSK 1957
            RVA KCGL+ +TPSAFQIRYGG+KGVV VDP SS KLSLR SM KY+S+N KLDVL WSK
Sbjct: 538  RVASKCGLQ-YTPSAFQIRYGGYKGVVGVDPDSSMKLSLRKSMSKYESDNIKLDVLGWSK 596

Query: 1958 YQPCFLNRQLISLLSTLGVNDHVFERKQREAIAQLDGILTDPLRAREALELMSPGENTNI 2137
            YQPC+LNRQLI+LLSTLGV D V E+KQ+EA+ QLD IL D L+A+EALELMSPGENTNI
Sbjct: 597  YQPCYLNRQLITLLSTLGVKDEVLEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNI 656

Query: 2138 LKEILKCGYKPDSEPFLSMMLQTFRASKLLDLRTKARIFVPQGRSMIGCLDETRTLEYGQ 2317
            LK +L CGYKPD+EPFLSMMLQTFRASKLLDLRT++RIF+P GR+M+GCLDE+RTLEYGQ
Sbjct: 657  LKAMLNCGYKPDAEPFLSMMLQTFRASKLLDLRTRSRIFIPNGRTMMGCLDESRTLEYGQ 716

Query: 2318 VFIQCSSAGRRQFYEDFHLYDSSDS-EYNFILEGTVVVAKNPCLHPGDVRILRAVNLPAL 2494
            VF+Q + AG  +F +D H +++S S   NFIL+G VVVAKNPCLHPGD+R+L+AVN+ AL
Sbjct: 717  VFVQFTGAGHGEFSDDLHPFNNSRSTNSNFILKGNVVVAKNPCLHPGDIRVLKAVNVRAL 776

Query: 2495 HHMVDCVVFPQKGRRPHPNECSGSDL 2572
            HHMVDCVVFPQKG+RPHPNECSGSDL
Sbjct: 777  HHMVDCVVFPQKGKRPHPNECSGSDL 802


>gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 1115

 Score = 1075 bits (2779), Expect = 0.0
 Identities = 541/806 (67%), Positives = 649/806 (80%), Gaps = 5/806 (0%)
 Frame = +2

Query: 170  MGKTIRVSGFPYVLSADVVTRFLEQSTGQETVYALEVKRCKTGRRAYATVQFIDIRSAEL 349
            MGKTI+V GFP +LSA+VV  FLE+ TG  T+ ALEVK+ K G RA+A VQF+D  SA+ 
Sbjct: 1    MGKTIQVFGFPNLLSAEVVKLFLEKHTGYGTICALEVKQSKGGSRAFAKVQFVDNISADK 60

Query: 350  IISLAQQRLYYGSSYLRAWEMPADIVPRPRNFVHQMEQIVLSFGCQVSKNKFSVLWKKEN 529
            II+LA +RLY+GSSYL+AWEM  DIV + R +V  M+ I L+FGCQ+S++KF+VL   E 
Sbjct: 61   IINLASKRLYFGSSYLKAWEMKTDIV-QLRAYVDHMDGITLNFGCQISEDKFAVLGSTE- 118

Query: 530  VSVXXXXXXXXXXXXXXXXSVDYKLELSYESFWQLILYCPRGQASKLLLIQLFGAPRIFK 709
            VS+                S DYKL+LSYE+ WQ++L+ P GQ ++ LLIQLFGAPRI+K
Sbjct: 119  VSIKFGIGLKKFFFFLSSGSADYKLQLSYENIWQVVLHRPYGQNAQFLLIQLFGAPRIYK 178

Query: 710  RIEESAFSYFKETPDDQWVRTTDFTPSCIGQSSGICLELPRGVQIPNFSDYFAWYKESES 889
            R+E S +S+FKETPDDQWVRTTDFTPS IG SS +CL+  RGV +PNF + F  Y E E+
Sbjct: 179  RLENSCYSFFKETPDDQWVRTTDFTPSWIGLSSSLCLQFRRGVHLPNFQESFFHYAEREN 238

Query: 890  QFILETCSPY--SYNKVLVPILRPPQGVELPYKILFRICCLVQTGCLPGPSLDEYFFQLV 1063
               L+T   +  S    LVP ++PP+G+ +PYKILF+I  LVQ GC+PGP+L+ YFF+LV
Sbjct: 239  NITLQTGFTFFVSQKSALVPNVQPPEGIAIPYKILFKISSLVQHGCIPGPALNVYFFRLV 298

Query: 1064 DPQRINIGFIEHALENMYNLKECCYAPVQWLAEQYNXXXXXXXXXXXXTIALDDGLVYIR 1243
            DPQR N+  IE ALE +Y LKECCY PV+WL EQY+            +I LDDGLVY+R
Sbjct: 299  DPQRRNVACIEQALEKLYYLKECCYDPVRWLTEQYDGYLKGRQPPKSPSITLDDGLVYVR 358

Query: 1244 RVQVTPCKVYFCGPEVNVSNRVLRNFQGDIDNFLRVSFIDEEWNKMFSTDLVPR-NVPNG 1420
            RV VTPCKVYFCGPEVNVSNRVLRN+  DIDNFLRVSF+DEEW K++ST+L+P+ +  NG
Sbjct: 359  RVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDNFLRVSFVDEEWEKLYSTELLPKASTGNG 418

Query: 1421 -RTEIYHRILSTLKNGIVIGNKKFEFLAFSSSQLRDNSVWMFASRPGLSAADIRAWMGDF 1597
             RT IY RILSTL+ G VIG+KKFEFLAFSSSQLRDNSVWMFASR GL+  DIR+WMGDF
Sbjct: 419  IRTNIYERILSTLRKGFVIGDKKFEFLAFSSSQLRDNSVWMFASRRGLTTNDIRSWMGDF 478

Query: 1598 GSIRNVAKYAARLGQSFSSSKETLTVDRHEIEMIPDIVVGATSNYVFSDGIGKISAEFAQ 1777
              I+NVAKYAARLGQSF SS+ETL+V RHEIE+IPD+ V  TS YVFSDGIGKISA+FA+
Sbjct: 479  SQIKNVAKYAARLGQSFGSSRETLSVLRHEIEVIPDVKVHGTS-YVFSDGIGKISADFAR 537

Query: 1778 RVAVKCGLKKFTPSAFQIRYGGFKGVVAVDPASSKKLSLRPSMKKYDSNNTKLDVLAWSK 1957
            RVA KCGL+ +TPSAFQIRYGG+KGVVAVDP SS KLSLR SM KY+S+N KLDVL WSK
Sbjct: 538  RVASKCGLQ-YTPSAFQIRYGGYKGVVAVDPYSSMKLSLRKSMSKYESDNNKLDVLGWSK 596

Query: 1958 YQPCFLNRQLISLLSTLGVNDHVFERKQREAIAQLDGILTDPLRAREALELMSPGENTNI 2137
            YQPC+LNRQL++LLSTLGV D V E+KQ+EA+ QLD IL D L+A+EALELMSPGENTNI
Sbjct: 597  YQPCYLNRQLVTLLSTLGVKDDVLEQKQKEAVHQLDAILHDSLKAQEALELMSPGENTNI 656

Query: 2138 LKEILKCGYKPDSEPFLSMMLQTFRASKLLDLRTKARIFVPQGRSMIGCLDETRTLEYGQ 2317
            LK +L CGY PD+EPFLSMMLQTFRASKLLDLRT++RIF+P GR+M+GCLDE+RTLEYGQ
Sbjct: 657  LKAMLNCGYMPDAEPFLSMMLQTFRASKLLDLRTRSRIFIPNGRAMMGCLDESRTLEYGQ 716

Query: 2318 VFIQCSSAGRRQFYEDFHLYDSSDS-EYNFILEGTVVVAKNPCLHPGDVRILRAVNLPAL 2494
            VF+Q + AG R+F ED H +++S S   NFIL+G VVVAKNPCLHPGD+R+LRAV++PAL
Sbjct: 717  VFVQFTGAGHREFSEDLHPFNNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPAL 776

Query: 2495 HHMVDCVVFPQKGRRPHPNECSGSDL 2572
            HHMVDCVVFPQKG+RPHPNECSGSDL
Sbjct: 777  HHMVDCVVFPQKGKRPHPNECSGSDL 802