BLASTX nr result

ID: Cephaelis21_contig00012010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00012010
         (1176 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_201257.2| DNA repair protein XRCC2-like protein [Arabidop...   117   4e-24
ref|NP_001032141.1| DNA repair protein XRCC2-like protein [Arabi...   117   4e-24
dbj|BAB11419.1| unnamed protein product [Arabidopsis thaliana]        117   4e-24
ref|NP_851268.1| DNA repair protein XRCC2-like protein [Arabidop...   117   4e-24
ref|XP_002864907.1| predicted protein [Arabidopsis lyrata subsp....   115   2e-23

>ref|NP_201257.2| DNA repair protein XRCC2-like protein [Arabidopsis thaliana]
           gi|332010527|gb|AED97910.1| DNA repair protein
           XRCC2-like protein [Arabidopsis thaliana]
          Length = 342

 Score =  117 bits (294), Expect = 4e-24
 Identities = 58/103 (56%), Positives = 73/103 (70%)
 Frame = -2

Query: 311 QAKEWIEIDETAKEMLTRVFAERXXXXXXXXXXXXXXXPGNVVEIVGPPSSAKTHILMQA 132
           +A+ WI  DETAK+ML+RV  +R                GNVVEI G  +SAKT IL+QA
Sbjct: 5   EARSWIRGDETAKQMLSRVLKDRAFLLIPPLHRVPLRA-GNVVEITGASTSAKTQILIQA 63

Query: 131 AISCILPKEWNGVQFGGMERLAVFVDLDCRFDVLRFSQLLKHK 3
           AISCILPK WNG+ +GG+ +L +F+DLDCRFDVLR SQ+LKH+
Sbjct: 64  AISCILPKTWNGIHYGGLGKLVLFLDLDCRFDVLRLSQMLKHR 106


>ref|NP_001032141.1| DNA repair protein XRCC2-like protein [Arabidopsis thaliana]
           gi|51969010|dbj|BAD43197.1| putative protein
           [Arabidopsis thaliana] gi|332010529|gb|AED97912.1| DNA
           repair protein XRCC2-like protein [Arabidopsis thaliana]
          Length = 295

 Score =  117 bits (294), Expect = 4e-24
 Identities = 58/103 (56%), Positives = 73/103 (70%)
 Frame = -2

Query: 311 QAKEWIEIDETAKEMLTRVFAERXXXXXXXXXXXXXXXPGNVVEIVGPPSSAKTHILMQA 132
           +A+ WI  DETAK+ML+RV  +R                GNVVEI G  +SAKT IL+QA
Sbjct: 5   EARSWIRGDETAKQMLSRVLKDRAFLLIPPLHRVPLRA-GNVVEITGASTSAKTQILIQA 63

Query: 131 AISCILPKEWNGVQFGGMERLAVFVDLDCRFDVLRFSQLLKHK 3
           AISCILPK WNG+ +GG+ +L +F+DLDCRFDVLR SQ+LKH+
Sbjct: 64  AISCILPKTWNGIHYGGLGKLVLFLDLDCRFDVLRLSQMLKHR 106


>dbj|BAB11419.1| unnamed protein product [Arabidopsis thaliana]
          Length = 403

 Score =  117 bits (294), Expect = 4e-24
 Identities = 58/103 (56%), Positives = 73/103 (70%)
 Frame = -2

Query: 311 QAKEWIEIDETAKEMLTRVFAERXXXXXXXXXXXXXXXPGNVVEIVGPPSSAKTHILMQA 132
           +A+ WI  DETAK+ML+RV  +R                GNVVEI G  +SAKT IL+QA
Sbjct: 5   EARSWIRGDETAKQMLSRVLKDRAFLLIPPLHRVPLRA-GNVVEITGASTSAKTQILIQA 63

Query: 131 AISCILPKEWNGVQFGGMERLAVFVDLDCRFDVLRFSQLLKHK 3
           AISCILPK WNG+ +GG+ +L +F+DLDCRFDVLR SQ+LKH+
Sbjct: 64  AISCILPKTWNGIHYGGLGKLVLFLDLDCRFDVLRLSQMLKHR 106


>ref|NP_851268.1| DNA repair protein XRCC2-like protein [Arabidopsis thaliana]
           gi|55583880|sp|Q682D3.2|XRCC2_ARATH RecName: Full=DNA
           repair protein XRCC2 homolog; AltName: Full=X-ray repair
           cross-complementing protein 2 homolog; Short=AtXRCC2
           gi|27524915|emb|CAD12880.1| putative X-ray repair
           cross-complementing protein 2 [Arabidopsis thaliana]
           gi|332010528|gb|AED97911.1| DNA repair protein
           XRCC2-like protein [Arabidopsis thaliana]
          Length = 372

 Score =  117 bits (294), Expect = 4e-24
 Identities = 58/103 (56%), Positives = 73/103 (70%)
 Frame = -2

Query: 311 QAKEWIEIDETAKEMLTRVFAERXXXXXXXXXXXXXXXPGNVVEIVGPPSSAKTHILMQA 132
           +A+ WI  DETAK+ML+RV  +R                GNVVEI G  +SAKT IL+QA
Sbjct: 5   EARSWIRGDETAKQMLSRVLKDRAFLLIPPLHRVPLRA-GNVVEITGASTSAKTQILIQA 63

Query: 131 AISCILPKEWNGVQFGGMERLAVFVDLDCRFDVLRFSQLLKHK 3
           AISCILPK WNG+ +GG+ +L +F+DLDCRFDVLR SQ+LKH+
Sbjct: 64  AISCILPKTWNGIHYGGLGKLVLFLDLDCRFDVLRLSQMLKHR 106


>ref|XP_002864907.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310742|gb|EFH41166.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 389

 Score =  115 bits (288), Expect = 2e-23
 Identities = 58/103 (56%), Positives = 72/103 (69%)
 Frame = -2

Query: 311 QAKEWIEIDETAKEMLTRVFAERXXXXXXXXXXXXXXXPGNVVEIVGPPSSAKTHILMQA 132
           +A+ WI  DETAK+ML+RV  +R                GNVVEI G   SAKT IL+QA
Sbjct: 5   EARSWICGDETAKQMLSRVLKDRAFMLLPPLHRVPLRA-GNVVEITGASPSAKTQILIQA 63

Query: 131 AISCILPKEWNGVQFGGMERLAVFVDLDCRFDVLRFSQLLKHK 3
           AISCILPK WNG+ +GG+ +L +F+DLDCRFDVLR SQ+LKH+
Sbjct: 64  AISCILPKTWNGIHYGGLGKLVLFLDLDCRFDVLRLSQMLKHR 106


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