BLASTX nr result

ID: Cephaelis21_contig00011310 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00011310
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004173054.1| PREDICTED: F-box protein SKIP28-like, partia...   132   2e-29
ref|XP_004150124.1| PREDICTED: F-box protein SKIP28-like [Cucumi...   132   2e-29
ref|XP_003532508.1| PREDICTED: LOW QUALITY PROTEIN: F-box protei...   131   5e-29
ref|XP_002315864.1| predicted protein [Populus trichocarpa] gi|2...   129   3e-28
emb|CBI26851.3| unnamed protein product [Vitis vinifera]              129   3e-28

>ref|XP_004173054.1| PREDICTED: F-box protein SKIP28-like, partial [Cucumis sativus]
          Length = 370

 Score =  132 bits (333), Expect = 2e-29
 Identities = 72/156 (46%), Positives = 97/156 (62%), Gaps = 4/156 (2%)
 Frame = -3

Query: 457 TSPGSYKMEEVQKESEDTDSP----IQGGGLPHEAXXXXXXXXXXXXXLATSQVCRSLRE 290
           TS    K EE+   SE+ + P    +   G PHEA             L+ S VC SLR+
Sbjct: 17  TSAAEKKDEELTSMSENQEPPNPASVAEAGPPHEALFHVMTYLPLFELLSLSAVCVSLRD 76

Query: 289 AVKNDVLPWLNIVVGKPLDKRLNNDHLLNITSKAQGRLKTLVLLNCHKITDDGLQQVIAR 110
           AV++DVLPWL+IVV   L  RL++  L  I  KA GRL+TL L+NC KI+D GL +V+  
Sbjct: 77  AVEHDVLPWLHIVVDGRLSSRLSDYTLGRIARKASGRLRTLALINCFKISDSGLHEVVEN 136

Query: 109 NPLVTRLWLPGCTSLTPNAVIETVKLLRKNNHRLKS 2
           NPL+T+L++PGCTSLTP  V+  VK L +++H LK+
Sbjct: 137 NPLLTKLYVPGCTSLTPEGVVRAVKTLSQDSHNLKN 172


>ref|XP_004150124.1| PREDICTED: F-box protein SKIP28-like [Cucumis sativus]
          Length = 336

 Score =  132 bits (333), Expect = 2e-29
 Identities = 72/156 (46%), Positives = 97/156 (62%), Gaps = 4/156 (2%)
 Frame = -3

Query: 457 TSPGSYKMEEVQKESEDTDSP----IQGGGLPHEAXXXXXXXXXXXXXLATSQVCRSLRE 290
           TS    K EE+   SE+ + P    +   G PHEA             L+ S VC SLR+
Sbjct: 17  TSAAEKKDEELTSMSENQEPPNPASVAEAGPPHEALFHVMTYLPLFELLSLSAVCVSLRD 76

Query: 289 AVKNDVLPWLNIVVGKPLDKRLNNDHLLNITSKAQGRLKTLVLLNCHKITDDGLQQVIAR 110
           AV++DVLPWL+IVV   L  RL++  L  I  KA GRL+TL L+NC KI+D GL +V+  
Sbjct: 77  AVEHDVLPWLHIVVDGRLSSRLSDYTLGRIARKASGRLRTLALINCFKISDSGLHEVVEN 136

Query: 109 NPLVTRLWLPGCTSLTPNAVIETVKLLRKNNHRLKS 2
           NPL+T+L++PGCTSLTP  V+  VK L +++H LK+
Sbjct: 137 NPLLTKLYVPGCTSLTPEGVVRAVKTLSQDSHNLKN 172


>ref|XP_003532508.1| PREDICTED: LOW QUALITY PROTEIN: F-box protein SKIP28-like [Glycine
           max]
          Length = 313

 Score =  131 bits (330), Expect = 5e-29
 Identities = 66/146 (45%), Positives = 93/146 (63%)
 Frame = -3

Query: 439 KMEEVQKESEDTDSPIQGGGLPHEAXXXXXXXXXXXXXLATSQVCRSLREAVKNDVLPWL 260
           K  EV++E+ +  +P       HEA             +  SQVC SLR+AV ND+LPWL
Sbjct: 8   KAVEVEQEASEAKAP-------HEAMFLVLAYLPVYEVVVMSQVCTSLRDAVNNDILPWL 60

Query: 259 NIVVGKPLDKRLNNDHLLNITSKAQGRLKTLVLLNCHKITDDGLQQVIARNPLVTRLWLP 80
           N+ V +PL  RLN+D L+ ITSKA G LKTL L+NC  +TD+GLQ+V+ +NPL+ +L +P
Sbjct: 61  NVFVQRPLSWRLNDDILIKITSKANGSLKTLALINCMHVTDEGLQRVVQQNPLINKLHIP 120

Query: 79  GCTSLTPNAVIETVKLLRKNNHRLKS 2
            CT +TP  V+  VK L + ++ LK+
Sbjct: 121 ACTGITPXGVLRAVKTLCQRSNCLKT 146


>ref|XP_002315864.1| predicted protein [Populus trichocarpa] gi|222864904|gb|EEF02035.1|
           predicted protein [Populus trichocarpa]
          Length = 306

 Score =  129 bits (324), Expect = 3e-28
 Identities = 63/127 (49%), Positives = 88/127 (69%)
 Frame = -3

Query: 382 GLPHEAXXXXXXXXXXXXXLATSQVCRSLREAVKNDVLPWLNIVVGKPLDKRLNNDHLLN 203
           G PHEA             L  S+VC  LR+AV  DVLPW +I++ +PL+ RL+++ L+ 
Sbjct: 28  GPPHEALFFVLAYLDVFDLLVMSEVCMPLRDAVSKDVLPWRDIIIERPLNSRLSDEILVQ 87

Query: 202 ITSKAQGRLKTLVLLNCHKITDDGLQQVIARNPLVTRLWLPGCTSLTPNAVIETVKLLRK 23
           ITSKA GRL+TL L+NC KITDDGLQ VI +N L+++L +PGC+ LTP  +I TVK L +
Sbjct: 88  ITSKAHGRLRTLALINCFKITDDGLQTVIEKNHLISKLHVPGCSGLTPEGIIRTVKTLSQ 147

Query: 22  NNHRLKS 2
           +++ L+S
Sbjct: 148 HHNSLES 154


>emb|CBI26851.3| unnamed protein product [Vitis vinifera]
          Length = 237

 Score =  129 bits (323), Expect = 3e-28
 Identities = 64/126 (50%), Positives = 85/126 (67%)
 Frame = -3

Query: 382 GLPHEAXXXXXXXXXXXXXLATSQVCRSLREAVKNDVLPWLNIVVGKPLDKRLNNDHLLN 203
           G PHEA             L  S+VCRSLR+AV  DVL WL+I+V KPL+   +++ ++ 
Sbjct: 43  GPPHEALLLVLAYLPLFELLNMSEVCRSLRDAVDKDVLQWLDIIVEKPLNMLFSDEIMIK 102

Query: 202 ITSKAQGRLKTLVLLNCHKITDDGLQQVIARNPLVTRLWLPGCTSLTPNAVIETVKLLRK 23
           +TSKA GRL+TL L++C KITDDGLQQVI +NPL+ RL+LP CT LTP  ++  VK L +
Sbjct: 103 LTSKANGRLRTLALMSCTKITDDGLQQVIEKNPLINRLYLPACTGLTPEGIMRAVKTLTE 162

Query: 22  NNHRLK 5
           +   LK
Sbjct: 163 HYQALK 168


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