BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00011288
         (2938 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268591.1| PREDICTED: cleavage and polyadenylation spec...   729   0.0  
ref|XP_004140773.1| PREDICTED: cleavage and polyadenylation spec...   704   0.0  
ref|XP_003533995.1| PREDICTED: cleavage and polyadenylation spec...   696   0.0  
ref|XP_002517902.1| cleavage and polyadenylation specificity fac...   693   0.0  
ref|NP_197776.1| cleavage and polyadenylation specificity factor...   688   0.0  

>ref|XP_002268591.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 2
            [Vitis vinifera] gi|302143847|emb|CBI22708.3| unnamed
            protein product [Vitis vinifera]
          Length = 740

 Score =  729 bits (1882), Expect(2) = 0.0
 Identities = 358/434 (82%), Positives = 400/434 (92%), Gaps = 1/434 (0%)
 Frame = -1

Query: 2707 MGTSVQVKPLCGVYNENPLSYLVSVDGFNFLIDCGWNDQFDTSLLEPLSRVATTVDAVLL 2528
            MGTSVQV PLCGVYNENPLSYLVS+DGFNFL+DCGWND FD S L+PL+RVA+T+DAVLL
Sbjct: 1    MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLVDCGWNDHFDPSFLQPLARVASTIDAVLL 60

Query: 2527 SHSDTLHLGALPYAMKKLGLSAPVFATEPVCRLGLLTMYDQFLSRKQLSDFELFTLDDID 2348
            +H DTLHLGALPYAMK+LGLSAPV++TEPV RLGLLTMYDQ+LSRKQ+SDF+LFTLDDID
Sbjct: 61   AHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQYLSRKQVSDFDLFTLDDID 120

Query: 2347 SAFQNITSLTYSQNHHISGKGEGIVIAPYVSGHLLGGAIWKITKDGEDVIYAVDFNHRKE 2168
            SAFQN+T LTYSQN+H+ GKGEGIVIAP+V+GHLLGG +WKITKDGEDVIYAVDFNHRKE
Sbjct: 121  SAFQNVTRLTYSQNYHLFGKGEGIVIAPHVAGHLLGGTVWKITKDGEDVIYAVDFNHRKE 180

Query: 2167 RHLNGTVLESFVRPAVLITDAYNALSNQPSRRQRDQEFLDAIMKALRADGKVLLPVDTAG 1988
            R LNGTVLESFVRPAVLITDAYNAL+NQPSRRQRDQEFLD I+K LR DG VLLPVDTAG
Sbjct: 181  RLLNGTVLESFVRPAVLITDAYNALNNQPSRRQRDQEFLDVILKTLRGDGNVLLPVDTAG 240

Query: 1987 RVLELLLILEQHWEQHKLAYPIFFLTYVSSSTINYVKSFLEWMSDLIAQSFEHTRNNSFL 1808
            RVLEL+LILEQ+W QH L YPIFFLTYV+SSTI+YVKSFLEWMSD IA+SFEHTR+N+FL
Sbjct: 241  RVLELMLILEQYWTQHHLNYPIFFLTYVASSTIDYVKSFLEWMSDSIAKSFEHTRDNAFL 300

Query: 1807 LRHVKLLINKSELENIPDGPKVVLASMGSLETGFSHDIFVEWANDTKNLVLFTERGQFAT 1628
            L+HV LLI+KSELE +PDGPK+VLASM SLE GFSHDIFVEWA D KNLVLF+ERGQFAT
Sbjct: 301  LKHVTLLISKSELEKVPDGPKIVLASMASLEAGFSHDIFVEWATDAKNLVLFSERGQFAT 360

Query: 1627 LARMLQADPPPKAVKVTMSKRVPLVGEELSAYEEEQDRIRKEEALKAAQIKEEESNAVR- 1451
            LARMLQADPPPKAVKVTMSKRVPLVGEEL+AYEEEQ+RI+KEEALKA+  KE+E  A R 
Sbjct: 361  LARMLQADPPPKAVKVTMSKRVPLVGEELAAYEEEQERIKKEEALKASLSKEDEMKASRG 420

Query: 1450 TEIAPNDPMVLDTS 1409
            ++    DPMV+DT+
Sbjct: 421  SDNKLGDPMVIDTT 434



 Score =  461 bits (1186), Expect(2) = 0.0
 Identities = 224/289 (77%), Positives = 251/289 (86%)
 Frame = -2

Query: 1299 RDVLVDGFVPSSTSVAPMFPFYEYSSEWDDFGEVINPDDYVIKGDNIDSTLMHVDGDLNG 1120
            RD+L+DGFVP STSVAPMFPFYE SSEWDDFGEVINP+DYVIK +++D   M V  DLNG
Sbjct: 451  RDILIDGFVPPSTSVAPMFPFYENSSEWDDFGEVINPEDYVIKDEDMDQATMQVGDDLNG 510

Query: 1119 KLDEGSISLMLDTTPSKVVSTELTVQVKCSLIYMDFEGRSDGRSIKSILAHVNPLKLVLV 940
            KLDEG+ SL+ DTTPSKV+S ELTVQVKC L+YMDFEGRSDGRSIKSIL+HV PLKLVLV
Sbjct: 511  KLDEGAASLIFDTTPSKVISNELTVQVKCMLVYMDFEGRSDGRSIKSILSHVAPLKLVLV 570

Query: 939  HGSAEATEHLKQHCLKHVCPHVYAPQIEESIDVTSDLCAYKVQLPEKLMTDVLFRKLGDY 760
            HGSAEATEHLKQHCLKHVCPHVYAPQI E+IDVTSDLCAYKVQL EKLM++VLF+KLGDY
Sbjct: 571  HGSAEATEHLKQHCLKHVCPHVYAPQIGETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDY 630

Query: 759  EIAWIDGEVGKTESDMXXXXXXXXXXXPHKSVLVGDIKMADFKQFLGSKGIQVEFAGGAL 580
            E+AW+D EVGKTES              H +V VGDIKMADFKQFL SKGIQVEF+GGAL
Sbjct: 631  EVAWVDAEVGKTESGSLSLLPLSTPPPSHDTVFVGDIKMADFKQFLASKGIQVEFSGGAL 690

Query: 579  RCGEHVTLRKVGDASQKGGSAAAVQQILLEGPLTEDYYKIREHLYSQFY 433
            RCGE+VTLRKVGDASQKGG  A +QQI++EGPL ++YYKIRE+LYSQ+Y
Sbjct: 691  RCGEYVTLRKVGDASQKGG-GAIIQQIVMEGPLCDEYYKIREYLYSQYY 738


>ref|XP_004140773.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            2-like [Cucumis sativus]
          Length = 738

 Score =  704 bits (1818), Expect(2) = 0.0
 Identities = 347/434 (79%), Positives = 392/434 (90%), Gaps = 1/434 (0%)
 Frame = -1

Query: 2707 MGTSVQVKPLCGVYNENPLSYLVSVDGFNFLIDCGWNDQFDTSLLEPLSRVATTVDAVLL 2528
            MGTSVQV PLCGVYNENPLSYLVSVD FNFLIDCGWND FD +LL+PLSRVA+T+DAVL+
Sbjct: 1    MGTSVQVTPLCGVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60

Query: 2527 SHSDTLHLGALPYAMKKLGLSAPVFATEPVCRLGLLTMYDQFLSRKQLSDFELFTLDDID 2348
            SH DTLHLGALPYAMK+LGLSAPVF+TEPV RLGLLTMYDQF++RKQ+S+F+LFTLDDID
Sbjct: 61   SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120

Query: 2347 SAFQNITSLTYSQNHHISGKGEGIVIAPYVSGHLLGGAIWKITKDGEDVIYAVDFNHRKE 2168
            SAFQ +T LTYSQNHH+SGKGEGIVIAP+V+GHLLGG +WKITKDGEDVIYAVDFNHRKE
Sbjct: 121  SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180

Query: 2167 RHLNGTVLESFVRPAVLITDAYNALSNQPSRRQRDQEFLDAIMKALRADGKVLLPVDTAG 1988
            RHLNGT+LESFVRPAVLITDAYNAL+NQP RRQ+D+EF D I K LRA+G VLLPVDTAG
Sbjct: 181  RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240

Query: 1987 RVLELLLILEQHWEQHKLAYPIFFLTYVSSSTINYVKSFLEWMSDLIAQSFEHTRNNSFL 1808
            RVLEL+ ILE +WE+  L YPIFFLTYV+SSTI+Y+KSFLEWMSD IA+SFEHTRNN+FL
Sbjct: 241  RVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300

Query: 1807 LRHVKLLINKSELENIPDGPKVVLASMGSLETGFSHDIFVEWANDTKNLVLFTERGQFAT 1628
            L+HV LLINKSEL+N PDGPKVVLASM SLE G+SHDIFV+WA D KNLVLF+ERGQF T
Sbjct: 301  LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGT 360

Query: 1627 LARMLQADPPPKAVKVTMSKRVPLVGEELSAYEEEQDRIRKEEALKAAQIKEEESNAVR- 1451
            LARMLQADPPPKAVKVT+SKRVPL G+EL AYEEEQ+R +KEEALKA+ +KEE+S A   
Sbjct: 361  LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNR-KKEEALKASLLKEEQSKASHG 419

Query: 1450 TEIAPNDPMVLDTS 1409
             +    DPM++D S
Sbjct: 420  ADNDTGDPMIIDAS 433



 Score =  452 bits (1163), Expect(2) = 0.0
 Identities = 223/291 (76%), Positives = 250/291 (85%)
 Frame = -2

Query: 1305 AFRDVLVDGFVPSSTSVAPMFPFYEYSSEWDDFGEVINPDDYVIKGDNIDSTLMHVDGDL 1126
            A+RD+L+DGFVP ST VAPMFPFYE +S WDDFGEVINPDDYVIK +++D   MH  GD+
Sbjct: 447  AYRDILIDGFVPPSTGVAPMFPFYENTSAWDDFGEVINPDDYVIKDEDMDQAAMHAGGDV 506

Query: 1125 NGKLDEGSISLMLDTTPSKVVSTELTVQVKCSLIYMDFEGRSDGRSIKSILAHVNPLKLV 946
            +GKLDE + +L+LD  PSKVVS ELTVQVKCSL YMDFEGRSDGRSIKSIL+HV PLKLV
Sbjct: 507  DGKLDETAANLILDMKPSKVVSNELTVQVKCSLHYMDFEGRSDGRSIKSILSHVAPLKLV 566

Query: 945  LVHGSAEATEHLKQHCLKHVCPHVYAPQIEESIDVTSDLCAYKVQLPEKLMTDVLFRKLG 766
            LVHG+AEATEHLKQHCLK+VCPHVYAPQIEE+IDVTSDLCAYKVQL EKLM++VLF+KLG
Sbjct: 567  LVHGTAEATEHLKQHCLKNVCPHVYAPQIEETIDVTSDLCAYKVQLSEKLMSNVLFKKLG 626

Query: 765  DYEIAWIDGEVGKTESDMXXXXXXXXXXXPHKSVLVGDIKMADFKQFLGSKGIQVEFAGG 586
            DYEI W+D EVGKTE+             PHKSVLVGD+KMADFKQFL SKGIQVEFAGG
Sbjct: 627  DYEITWLDAEVGKTENGTLSLLPLSKAPAPHKSVLVGDLKMADFKQFLASKGIQVEFAGG 686

Query: 585  ALRCGEHVTLRKVGDASQKGGSAAAVQQILLEGPLTEDYYKIREHLYSQFY 433
            ALRCGE+VTLRKV DASQKGG  +  QQ+++EGPL EDYYKIRE LYSQFY
Sbjct: 687  ALRCGEYVTLRKVTDASQKGG-GSGTQQVVIEGPLCEDYYKIRELLYSQFY 736


>ref|XP_003533995.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            2-like isoform 1 [Glycine max]
          Length = 736

 Score =  696 bits (1797), Expect(2) = 0.0
 Identities = 349/443 (78%), Positives = 392/443 (88%), Gaps = 3/443 (0%)
 Frame = -1

Query: 2707 MGTSVQVKPLCGVYNENPLSYLVSVDGFNFLIDCGWNDQFDTSLLEPLSRVATTVDAVLL 2528
            MGTSVQV PLCGVYNENPLSYLVS+DGFNFL+DCGWND FD S L+PL+RVA+T+DAVLL
Sbjct: 1    MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLVDCGWNDHFDPSHLQPLARVASTIDAVLL 60

Query: 2527 SHSDTLHLGALPYAMKKLGLSAPVFATEPVCRLGLLTMYDQFLSRKQLSDFELFTLDDID 2348
            SH+DTLHLGALPYAMK+LGLSAPV++TEPV RLGLLTMYDQ+LSRKQ+S+F+LFTLDDID
Sbjct: 61   SHADTLHLGALPYAMKRLGLSAPVYSTEPVYRLGLLTMYDQYLSRKQVSEFDLFTLDDID 120

Query: 2347 SAFQNITSLTYSQNHHISGKGEGIVIAPYVSGHLLGGAIWKITKDGEDVIYAVDFNHRKE 2168
            SAFQ++T LTYSQNHH SGKGEGIVIAP+V+GHLLGG IWKITKDGEDVIYAVDFNHRKE
Sbjct: 121  SAFQSVTRLTYSQNHHFSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKE 180

Query: 2167 RHLNGTVLESFVRPAVLITDAYNALSNQPSRRQRDQEFLDAIMKALRADGKVLLPVDTAG 1988
            RHLNGTVL SFVRPAVLITDAYNAL+NQP RRQ D+EF D + K LRA G VLLPVDT G
Sbjct: 181  RHLNGTVLGSFVRPAVLITDAYNALNNQPYRRQNDKEFGDILKKTLRAGGNVLLPVDTVG 240

Query: 1987 RVLELLLILEQHWEQHKLAYPIFFLTYVSSSTINYVKSFLEWMSDLIAQSFEHTRNNSFL 1808
            RVLEL+L+LE +W    L YPI+FLTYV+SSTI+YVKSFLEWMSD IA+SFE TR N FL
Sbjct: 241  RVLELILMLELYWADENLNYPIYFLTYVASSTIDYVKSFLEWMSDTIAKSFEKTRENIFL 300

Query: 1807 LRHVKLLINKSELENIPDGPKVVLASMGSLETGFSHDIFVEWANDTKNLVLFTERGQFAT 1628
            L++V LLINK+EL+N PDGPKVVLASM SLE GFSHDIFVEWAND KNLVLFTERGQFAT
Sbjct: 301  LKYVTLLINKTELDNAPDGPKVVLASMASLEAGFSHDIFVEWANDVKNLVLFTERGQFAT 360

Query: 1627 LARMLQADPPPKAVKVTMSKRVPLVGEELSAYEEEQDRIRKEEALKAAQIKEEE---SNA 1457
            LARMLQADPPPKAVKV +SKRVPLVGEEL AYEEEQ+RI+K EALKA+ +KEEE   S+ 
Sbjct: 361  LARMLQADPPPKAVKVVVSKRVPLVGEELIAYEEEQNRIKK-EALKASLMKEEELKTSHG 419

Query: 1456 VRTEIAPNDPMVLDTSHGSDSKG 1388
               +I  +DPMV+D+ +  D  G
Sbjct: 420  ADNDI--SDPMVIDSGNNHDVTG 440



 Score =  464 bits (1193), Expect(2) = 0.0
 Identities = 226/296 (76%), Positives = 256/296 (86%)
 Frame = -2

Query: 1320 GQRNDAFRDVLVDGFVPSSTSVAPMFPFYEYSSEWDDFGEVINPDDYVIKGDNIDSTLMH 1141
            G R   +RD+ +DGFVP STSVAP+FP YE +SEWDDFGEVINPDDYVIK +++D T MH
Sbjct: 440  GPRGGGYRDIFIDGFVPPSTSVAPIFPCYENTSEWDDFGEVINPDDYVIKDEDMDQTAMH 499

Query: 1140 VDGDLNGKLDEGSISLMLDTTPSKVVSTELTVQVKCSLIYMDFEGRSDGRSIKSILAHVN 961
               D+NGKLDEG+ SL+LDT PSKVVS E TVQV+CSL+YMDFEGRSDGRSIK+IL+HV 
Sbjct: 500  GGSDINGKLDEGAASLILDTKPSKVVSDERTVQVRCSLVYMDFEGRSDGRSIKNILSHVA 559

Query: 960  PLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIEESIDVTSDLCAYKVQLPEKLMTDVL 781
            PLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIEE+IDVTSDLCAYKVQL EKLM++VL
Sbjct: 560  PLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIEETIDVTSDLCAYKVQLSEKLMSNVL 619

Query: 780  FRKLGDYEIAWIDGEVGKTESDMXXXXXXXXXXXPHKSVLVGDIKMADFKQFLGSKGIQV 601
            F+KLGDYEIAW+D  VGKTE+D            PHKSVLVGD+K+AD KQFL SKG+QV
Sbjct: 620  FKKLGDYEIAWVDAVVGKTENDPLSLLPVSGAAPPHKSVLVGDLKLADIKQFLSSKGVQV 679

Query: 600  EFAGGALRCGEHVTLRKVGDASQKGGSAAAVQQILLEGPLTEDYYKIREHLYSQFY 433
            EFAGGALRCGE+VTLRKVGDASQKGG + A QQI++EGPL EDYYKIR++LYSQFY
Sbjct: 680  EFAGGALRCGEYVTLRKVGDASQKGGGSGA-QQIVIEGPLCEDYYKIRDYLYSQFY 734


>ref|XP_002517902.1| cleavage and polyadenylation specificity factor, putative [Ricinus
            communis] gi|223542884|gb|EEF44420.1| cleavage and
            polyadenylation specificity factor, putative [Ricinus
            communis]
          Length = 740

 Score =  693 bits (1788), Expect(2) = 0.0
 Identities = 347/440 (78%), Positives = 390/440 (88%), Gaps = 2/440 (0%)
 Frame = -1

Query: 2707 MGTSVQVKPLCGVYNENPLSYLVSVDGFNFLIDCGWNDQFDTSLLEPLSRVATTVDAVLL 2528
            MGTSVQV PL GVYNENPLSYL+S+D FN LIDCGWND FD SLL+PLSRVA+T+DAVLL
Sbjct: 1    MGTSVQVTPLNGVYNENPLSYLISIDNFNLLIDCGWNDHFDPSLLQPLSRVASTIDAVLL 60

Query: 2527 SHSDTLHLGALPYAMKKLGLSAPVFATEPVCRLGLLTMYDQFLSRKQLSDFELFTLDDID 2348
            SHSDTLHLGALPYAMK+LGLSAPV++TEPV RLGLLTMYDQ+LSRK +S+F+LF+LDDID
Sbjct: 61   SHSDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQYLSRKAVSEFDLFSLDDID 120

Query: 2347 SAFQNITSLTYSQNHHISGKGEGIVIAPYVSGHLLGGAIWKITKDGEDVIYAVDFNHRKE 2168
            SAFQNIT LTYSQNHH+SGKGEGIVIAP+V+GHLLGG +WKITKDGEDV+YAVDFNHRKE
Sbjct: 121  SAFQNITRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTVWKITKDGEDVVYAVDFNHRKE 180

Query: 2167 RHLNGTVLESFVRPAVLITDAYNALSNQPSRRQRDQEFLD-AIMKALRADGKVLLPVDTA 1991
            RHLNGTVLESFVRPAVLITDAYNALSNQP R+QRD+EFL+  I+K L A G VLLPVDTA
Sbjct: 181  RHLNGTVLESFVRPAVLITDAYNALSNQPPRQQRDKEFLEKTILKTLEAGGNVLLPVDTA 240

Query: 1990 GRVLELLLILEQHWEQHKLAYPIFFLTYVSSSTINYVKSFLEWMSDLIAQSFEHTRNNSF 1811
            GRVLELLLILEQ W    L YPIFFLTYVSSSTI+YVKSFLEWMSD IA+SFE +R+N+F
Sbjct: 241  GRVLELLLILEQFWAHRLLNYPIFFLTYVSSSTIDYVKSFLEWMSDSIAKSFETSRDNAF 300

Query: 1810 LLRHVKLLINKSELENIPDGPKVVLASMGSLETGFSHDIFVEWANDTKNLVLFTERGQFA 1631
            LL+HV LLINK+EL+N P+ PKVVLASM SLE GFSHDIFVEWA D KNLVLFTERGQF 
Sbjct: 301  LLKHVTLLINKNELDNAPNVPKVVLASMASLEAGFSHDIFVEWAADVKNLVLFTERGQFG 360

Query: 1630 TLARMLQADPPPKAVKVTMSKRVPLVGEELSAYEEEQDRIRKEEALKAAQIKEEESNAVR 1451
            TLARMLQADPPPKAVKVTMS+RVPLVG+EL AYEEEQ R++KEE L A+ IKEEE+    
Sbjct: 361  TLARMLQADPPPKAVKVTMSRRVPLVGDELIAYEEEQKRLKKEEELNASMIKEEEAKVSH 420

Query: 1450 -TEIAPNDPMVLDTSHGSDS 1394
              +   +DPM++D S+ + S
Sbjct: 421  GPDSNLSDPMIIDASNNNAS 440



 Score =  468 bits (1205), Expect(2) = 0.0
 Identities = 231/297 (77%), Positives = 259/297 (87%)
 Frame = -2

Query: 1323 VGQRNDAFRDVLVDGFVPSSTSVAPMFPFYEYSSEWDDFGEVINPDDYVIKGDNIDSTLM 1144
            VG +   +RD+L DGFVP STSVAPMFPFYE ++EWDDFGEVINPDDYVIK D++D   M
Sbjct: 444  VGSQGTGYRDILFDGFVPPSTSVAPMFPFYENTTEWDDFGEVINPDDYVIKDDDMDQP-M 502

Query: 1143 HVDGDLNGKLDEGSISLMLDTTPSKVVSTELTVQVKCSLIYMDFEGRSDGRSIKSILAHV 964
            HV GD++GK DEGS S +LDT PSKVVS+ELTVQVKCSLIYMD+EGRSDGRSIKSILAHV
Sbjct: 503  HVGGDIDGKFDEGSASWILDTKPSKVVSSELTVQVKCSLIYMDYEGRSDGRSIKSILAHV 562

Query: 963  NPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIEESIDVTSDLCAYKVQLPEKLMTDV 784
             PLKLVLVHGSAE+TEHLKQHCLKHVCPHVYAPQIEE+IDVTSDLCAYKVQL EKLM++V
Sbjct: 563  APLKLVLVHGSAESTEHLKQHCLKHVCPHVYAPQIEETIDVTSDLCAYKVQLSEKLMSNV 622

Query: 783  LFRKLGDYEIAWIDGEVGKTESDMXXXXXXXXXXXPHKSVLVGDIKMADFKQFLGSKGIQ 604
            LF+KLGD+EIAW+D EVGKTESD            PHKSVLVGD+KMADFKQFL SKG+Q
Sbjct: 623  LFKKLGDFEIAWVDAEVGKTESDALSLLPISTSAPPHKSVLVGDLKMADFKQFLASKGVQ 682

Query: 603  VEFAGGALRCGEHVTLRKVGDASQKGGSAAAVQQILLEGPLTEDYYKIREHLYSQFY 433
            VEFAGGALRCGE+VTLRKVG+ +QKGG  +  QQI++EGPL EDYYKIRE+LYSQFY
Sbjct: 683  VEFAGGALRCGEYVTLRKVGNINQKGG-GSGTQQIVIEGPLCEDYYKIREYLYSQFY 738


>ref|NP_197776.1| cleavage and polyadenylation specificity factor subunit 2
            [Arabidopsis thaliana]
            gi|18203240|sp|Q9LKF9.2|CPSF2_ARATH RecName:
            Full=Cleavage and polyadenylation specificity factor
            subunit 2; AltName: Full=Cleavage and polyadenylation
            specificity factor 100 kDa subunit; Short=AtCPSF100;
            Short=CPSF 100 kDa subunit; AltName: Full=Protein EMBRYO
            DEFECTIVE 1265; AltName: Full=Protein ENHANCED SILENCING
            PHENOTYPE 5 gi|10176855|dbj|BAB10061.1| cleavage and
            polyadenylation specificity factor [Arabidopsis thaliana]
            gi|14334618|gb|AAK59487.1| putative cleavage and
            polyadenylation specificity factor [Arabidopsis thaliana]
            gi|28393921|gb|AAO42368.1| putative cleavage and
            polyadenylation specificity factor [Arabidopsis thaliana]
            gi|332005845|gb|AED93228.1| cleavage and polyadenylation
            specificity factor subunit 2 [Arabidopsis thaliana]
          Length = 739

 Score =  688 bits (1776), Expect(2) = 0.0
 Identities = 341/442 (77%), Positives = 394/442 (89%), Gaps = 2/442 (0%)
 Frame = -1

Query: 2707 MGTSVQVKPLCGVYNENPLSYLVSVDGFNFLIDCGWNDQFDTSLLEPLSRVATTVDAVLL 2528
            MGTSVQV PLCGVYNENPLSYLVS+DGFNFLIDCGWND FDTSLLEPLSRVA+T+DAVLL
Sbjct: 1    MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLIDCGWNDLFDTSLLEPLSRVASTIDAVLL 60

Query: 2527 SHSDTLHLGALPYAMKKLGLSAPVFATEPVCRLGLLTMYDQFLSRKQLSDFELFTLDDID 2348
            SH DTLH+GALPYAMK+LGLSAPV+ATEPV RLGLLTMYDQFLSRKQ+SDF+LFTLDDID
Sbjct: 61   SHPDTLHIGALPYAMKQLGLSAPVYATEPVHRLGLLTMYDQFLSRKQVSDFDLFTLDDID 120

Query: 2347 SAFQNITSLTYSQNHHISGKGEGIVIAPYVSGHLLGGAIWKITKDGEDVIYAVDFNHRKE 2168
            SAFQN+  LTYSQN+H+SGKGEGIVIAP+V+GH+LGG+IW+ITKDGEDVIYAVD+NHRKE
Sbjct: 121  SAFQNVIRLTYSQNYHLSGKGEGIVIAPHVAGHMLGGSIWRITKDGEDVIYAVDYNHRKE 180

Query: 2167 RHLNGTVLESFVRPAVLITDAYNAL-SNQPSRRQRDQEFLDAIMKALRADGKVLLPVDTA 1991
            RHLNGTVL+SFVRPAVLITDAY+AL +NQ +R+QRD+EFLD I K L   G VLLPVDTA
Sbjct: 181  RHLNGTVLQSFVRPAVLITDAYHALYTNQTARQQRDKEFLDTISKHLEVGGNVLLPVDTA 240

Query: 1990 GRVLELLLILEQHWEQHKLAYPIFFLTYVSSSTINYVKSFLEWMSDLIAQSFEHTRNNSF 1811
            GRVLELLLILEQHW Q   ++PI+FLTYVSSSTI+YVKSFLEWMSD I++SFE +R+N+F
Sbjct: 241  GRVLELLLILEQHWSQRGFSFPIYFLTYVSSSTIDYVKSFLEWMSDSISKSFETSRDNAF 300

Query: 1810 LLRHVKLLINKSELENIPDGPKVVLASMGSLETGFSHDIFVEWANDTKNLVLFTERGQFA 1631
            LLRHV LLINK++L+N P GPKVVLASM SLE GF+ +IFVEWAND +NLVLFTE GQF 
Sbjct: 301  LLRHVTLLINKTDLDNAPPGPKVVLASMASLEAGFAREIFVEWANDPRNLVLFTETGQFG 360

Query: 1630 TLARMLQADPPPKAVKVTMSKRVPLVGEELSAYEEEQDRIRKEEALKAAQIKEEESNAVR 1451
            TLARMLQ+ PPPK VKVTMSKRVPL GEEL AYEEEQ+R+++EEAL+A+ +KEEE+ A  
Sbjct: 361  TLARMLQSAPPPKFVKVTMSKRVPLAGEELIAYEEEQNRLKREEALRASLVKEEETKASH 420

Query: 1450 -TEIAPNDPMVLDTSHGSDSKG 1388
             ++   ++PM++DT    D  G
Sbjct: 421  GSDDNSSEPMIIDTKTTHDVIG 442



 Score =  434 bits (1115), Expect(2) = 0.0
 Identities = 209/298 (70%), Positives = 250/298 (83%), Gaps = 1/298 (0%)
 Frame = -2

Query: 1323 VGQRNDAFRDVLVDGFVPSSTSVAPMFPFYEYSSEWDDFGEVINPDDYVIKGDNIDSTLM 1144
            +G    A++D+L+DGFVP S+SVAPMFP+Y+ +SEWDDFGE+INPDDYVIK +++D   M
Sbjct: 441  IGSHGPAYKDILIDGFVPPSSSVAPMFPYYDNTSEWDDFGEIINPDDYVIKDEDMDRGAM 500

Query: 1143 HVDGDLNGKLDEGSISLMLDTTPSKVVSTELTVQVKCSLIYMDFEGRSDGRSIKSILAHV 964
            H  GD++G+LDE + SLMLDT PSKV+S EL V V CSL+ MD+EGRSDGRSIKS++AHV
Sbjct: 501  HNGGDVDGRLDEATASLMLDTRPSKVMSNELIVTVSCSLVKMDYEGRSDGRSIKSMIAHV 560

Query: 963  NPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIEESIDVTSDLCAYKVQLPEKLMTDV 784
            +PLKLVLVH  AEATEHLKQHCL ++CPHVYAPQIEE++DVTSDLCAYKVQL EKLM++V
Sbjct: 561  SPLKLVLVHAIAEATEHLKQHCLNNICPHVYAPQIEETVDVTSDLCAYKVQLSEKLMSNV 620

Query: 783  LFRKLGDYEIAWIDGEVGKTESDMXXXXXXXXXXXPHKSVLVGDIKMADFKQFLGSKGIQ 604
            +F+KLGD E+AW+D EVGKTE DM           PHK VLVGD+K+ADFKQFL SKG+Q
Sbjct: 621  IFKKLGDSEVAWVDSEVGKTERDMRSLLPMPGAASPHKPVLVGDLKIADFKQFLSSKGVQ 680

Query: 603  VEFA-GGALRCGEHVTLRKVGDASQKGGSAAAVQQILLEGPLTEDYYKIREHLYSQFY 433
            VEFA GGALRCGE+VTLRKVG   QKGG A+  QQIL+EGPL EDYYKIR++LYSQFY
Sbjct: 681  VEFAGGGALRCGEYVTLRKVGPTGQKGG-ASGPQQILIEGPLCEDYYKIRDYLYSQFY 737