BLASTX nr result

ID: Cephaelis21_contig00011274 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00011274
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002608399.1| ribosomal protein S4 [Vitis vinifera] gi|209...   177   8e-43
gb|AAW47276.1| ribosomal protein S4 [Platanus occidentalis]           176   2e-42
ref|YP_003587235.1| ribosomal protein S4 [Citrullus lanatus] gi|...   175   4e-42
gb|AAW47270.1| ribosomal protein S4 [Calycanthus floridus]            174   5e-42
gb|AAW47278.1| ribosomal protein S4 [Lonicera sp. Bergthorsson 0...   174   5e-42

>ref|YP_002608399.1| ribosomal protein S4 [Vitis vinifera] gi|209954196|emb|CAQ77661.1|
           ribosomal protein S4 [Vitis vinifera]
           gi|239764730|gb|ACS15201.1| ribosomal protein S4 [Vitis
           vinifera]
          Length = 362

 Score =  177 bits (449), Expect = 8e-43
 Identities = 89/104 (85%), Positives = 93/104 (89%), Gaps = 2/104 (1%)
 Frame = +1

Query: 1   FQENDAR--GEEIIRSFYIEILISKIIGKFLDRPIRMWRRTKTEWFCRLKTKRECRLLLK 174
           FQENDAR  GEEI RSFYIEI + KIIGKFLD P+RMWRRTKTEWF  LKTKR CRLLLK
Sbjct: 154 FQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLK 213

Query: 175 DRVLQQLRSSMQKEDLEKTKKFGSEKVCLGSSFAEHNRMKRNLY 306
            R LQQLRSSMQ+EDLE+TKKFGSEKVCLGSSFAEHNRMKRNLY
Sbjct: 214 SRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLY 257


>gb|AAW47276.1| ribosomal protein S4 [Platanus occidentalis]
          Length = 320

 Score =  176 bits (446), Expect = 2e-42
 Identities = 88/104 (84%), Positives = 93/104 (89%), Gaps = 2/104 (1%)
 Frame = +1

Query: 1   FQENDAR--GEEIIRSFYIEILISKIIGKFLDRPIRMWRRTKTEWFCRLKTKRECRLLLK 174
           FQENDAR  GEEI RSFYI+I + KIIGKFLD P+RMWRRTKTEWF  LKTKR CRLLLK
Sbjct: 137 FQENDARTRGEEIRRSFYIDISVEKIIGKFLDHPVRMWRRTKTEWFRLLKTKRGCRLLLK 196

Query: 175 DRVLQQLRSSMQKEDLEKTKKFGSEKVCLGSSFAEHNRMKRNLY 306
            R LQQLRSSMQ+EDLE+TKKFGSEKVCLGSSFAEHNRMKRNLY
Sbjct: 197 SRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLY 240


>ref|YP_003587235.1| ribosomal protein S4 [Citrullus lanatus]
           gi|259156791|gb|ACV96653.1| ribosomal protein S4
           [Citrullus lanatus]
          Length = 355

 Score =  175 bits (443), Expect = 4e-42
 Identities = 88/104 (84%), Positives = 92/104 (88%), Gaps = 2/104 (1%)
 Frame = +1

Query: 1   FQENDAR--GEEIIRSFYIEILISKIIGKFLDRPIRMWRRTKTEWFCRLKTKRECRLLLK 174
           FQENDAR  GEEI R FYIEIL+ KIIGKFLD P+RMWRRTKTEWF  LKTKR CRLLLK
Sbjct: 147 FQENDARIRGEEIRRFFYIEILVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLK 206

Query: 175 DRVLQQLRSSMQKEDLEKTKKFGSEKVCLGSSFAEHNRMKRNLY 306
            R LQQLRSSMQ+EDLE+TKKFG EKVCLGSSFAEHNRMKRNLY
Sbjct: 207 SRFLQQLRSSMQEEDLERTKKFGLEKVCLGSSFAEHNRMKRNLY 250


>gb|AAW47270.1| ribosomal protein S4 [Calycanthus floridus]
          Length = 319

 Score =  174 bits (442), Expect = 5e-42
 Identities = 87/104 (83%), Positives = 93/104 (89%), Gaps = 2/104 (1%)
 Frame = +1

Query: 1   FQENDAR--GEEIIRSFYIEILISKIIGKFLDRPIRMWRRTKTEWFCRLKTKRECRLLLK 174
           F+ENDAR  GEEI RSFYI+I + KIIGKFLD P+RMWRRTKTEWF  LKTKR CRLLLK
Sbjct: 137 FKENDARTCGEEIRRSFYIDISVEKIIGKFLDHPVRMWRRTKTEWFRLLKTKRGCRLLLK 196

Query: 175 DRVLQQLRSSMQKEDLEKTKKFGSEKVCLGSSFAEHNRMKRNLY 306
            R LQQLRSSMQ+EDLE+TKKFGSEKVCLGSSFAEHNRMKRNLY
Sbjct: 197 SRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLY 240


>gb|AAW47278.1| ribosomal protein S4 [Lonicera sp. Bergthorsson 0301]
          Length = 318

 Score =  174 bits (442), Expect = 5e-42
 Identities = 88/107 (82%), Positives = 93/107 (86%), Gaps = 5/107 (4%)
 Frame = +1

Query: 1   FQENDAR-----GEEIIRSFYIEILISKIIGKFLDRPIRMWRRTKTEWFCRLKTKRECRL 165
           FQENDAR     GEEI RSFYIEI + KIIGKFLD P+RMWRRTKTEWF  LKTKR CRL
Sbjct: 132 FQENDARTPNCLGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFRLLKTKRGCRL 191

Query: 166 LLKDRVLQQLRSSMQKEDLEKTKKFGSEKVCLGSSFAEHNRMKRNLY 306
           LLK R L+QLRSSMQ+EDLE+TKKFGSEKVCLGSSFAEHNRMKRNLY
Sbjct: 192 LLKSRFLKQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLY 238


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