BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00011107
         (1043 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513193.1| ribonucleoprotein, chloroplast, putative [Ri...   312   1e-82
ref|XP_002314019.1| predicted protein [Populus trichocarpa] gi|2...   306   7e-81
gb|ABK96373.1| unknown [Populus trichocarpa x Populus deltoides]      305   2e-80
ref|XP_003546870.1| PREDICTED: 30S ribosomal protein 2, chloropl...   303   5e-80
ref|XP_002265629.1| PREDICTED: 30S ribosomal protein 2, chloropl...   303   6e-80

>ref|XP_002513193.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
           gi|223547691|gb|EEF49184.1| ribonucleoprotein,
           chloroplast, putative [Ricinus communis]
          Length = 256

 Score =  312 bits (799), Expect = 1e-82
 Identities = 173/247 (70%), Positives = 192/247 (77%), Gaps = 1/247 (0%)
 Frame = -1

Query: 959 FTFSPNPTNLLQNPTSKSFTTHFSR-SCFEALKPLQTPLGFTLYPPTRLNAVAEGDPSSV 783
           FT  P PT L+  PT     THF   S F  L  +  P       P RL AVAE      
Sbjct: 20  FTNLPKPTFLILKPT-----THFINFSKFSHLDVVLNPR-----VPRRLFAVAEEAAPVA 69

Query: 782 ATADLSSKAARRLYVGNIPRTVTSDELQKIVEEHGAVEKAEVMYDKWTQRSRRFAFVTMK 603
              D SS+AA+RLY+GNIPRTV +DEL KIVEEHGAVEKAEVMYDK++ RSRRFAFVTM+
Sbjct: 70  PPPDPSSEAAKRLYIGNIPRTVDNDELTKIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMR 129

Query: 602 TVEDAEAAIEKLNGTQIGEREIKVNVTEKPLQSLDFSVLQAEESRFIDSPHKVYVGNLAK 423
           TVEDA A IEKLNGTQIG REIKVN+TEKPL S D S LQ EES+F+DSPHKVYVGNLAK
Sbjct: 130 TVEDANAVIEKLNGTQIGGREIKVNITEKPLASGDLSFLQLEESQFVDSPHKVYVGNLAK 189

Query: 422 TVTTKTLKRFFSDKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEDVEAAISSLNNAILEGQ 243
           TVT++ LK FFS+KGKVLSAKVSRVPGTSKSSGYGFV+FS EEDVEAAISS NN++LEGQ
Sbjct: 190 TVTSEILKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVSFSEEEDVEAAISSFNNSLLEGQ 249

Query: 242 KVRVNKA 222
           K+RVNKA
Sbjct: 250 KIRVNKA 256


>ref|XP_002314019.1| predicted protein [Populus trichocarpa] gi|222850427|gb|EEE87974.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score =  306 bits (783), Expect = 7e-81
 Identities = 167/249 (67%), Positives = 192/249 (77%), Gaps = 10/249 (4%)
 Frame = -1

Query: 938 TNLLQNPTSKSFTTHFSRSCFEALKPLQTPLGFTLYP----------PTRLNAVAEGDPS 789
           T  L   T  + + + S+  F+ LKP      F  +           P RL AVAE + +
Sbjct: 8   TTPLPTSTKLALSRNQSKPSFQILKPANPFNHFPKFTHLHKILNTKAPQRLFAVAE-ETA 66

Query: 788 SVATADLSSKAARRLYVGNIPRTVTSDELQKIVEEHGAVEKAEVMYDKWTQRSRRFAFVT 609
             A  D SS+AARRLYVGNIPRT+T++EL KIVEEHGAVEKAEVMYDK++ RSRRFAFVT
Sbjct: 67  PAAAVDPSSEAARRLYVGNIPRTLTNEELTKIVEEHGAVEKAEVMYDKYSGRSRRFAFVT 126

Query: 608 MKTVEDAEAAIEKLNGTQIGEREIKVNVTEKPLQSLDFSVLQAEESRFIDSPHKVYVGNL 429
           MKT EDA AAIEKLNGT+IG REIKVN+TEKPLQSLD   LQ++ES+F+DSP+KVYVGNL
Sbjct: 127 MKTAEDANAAIEKLNGTEIGGREIKVNITEKPLQSLDLPSLQSDESQFVDSPYKVYVGNL 186

Query: 428 AKTVTTKTLKRFFSDKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEDVEAAISSLNNAILE 249
           AKTV T TLK FFS KG VLSAKVSRVPGTSKSSG+GFVTFSSEEDVE AISS NN++LE
Sbjct: 187 AKTVATDTLKNFFSKKGNVLSAKVSRVPGTSKSSGFGFVTFSSEEDVEVAISSFNNSLLE 246

Query: 248 GQKVRVNKA 222
           GQ +RVNKA
Sbjct: 247 GQPIRVNKA 255


>gb|ABK96373.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 255

 Score =  305 bits (780), Expect = 2e-80
 Identities = 166/249 (66%), Positives = 192/249 (77%), Gaps = 10/249 (4%)
 Frame = -1

Query: 938 TNLLQNPTSKSFTTHFSRSCFEALKPLQTPLGFTLYP----------PTRLNAVAEGDPS 789
           T  L   T  + + + S+  F+ LKP      F  +           P RL AVAE + +
Sbjct: 8   TTPLPTSTKLALSRNQSKPSFQILKPANPFNHFPKFTHLHKILNTKAPQRLFAVAE-ETA 66

Query: 788 SVATADLSSKAARRLYVGNIPRTVTSDELQKIVEEHGAVEKAEVMYDKWTQRSRRFAFVT 609
             A  D SS+AARRLYVGNIPRT+T++EL KIVEEHGAVEKAEVMYDK++ RSRRFAFVT
Sbjct: 67  PAAAVDPSSEAARRLYVGNIPRTLTNEELTKIVEEHGAVEKAEVMYDKYSGRSRRFAFVT 126

Query: 608 MKTVEDAEAAIEKLNGTQIGEREIKVNVTEKPLQSLDFSVLQAEESRFIDSPHKVYVGNL 429
           MKT EDA AAIEKLNGT+IG REIKVN+TEKPLQSLD   LQ++E++F+DSP+KVYVGNL
Sbjct: 127 MKTAEDANAAIEKLNGTEIGGREIKVNITEKPLQSLDLPSLQSDETQFVDSPYKVYVGNL 186

Query: 428 AKTVTTKTLKRFFSDKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEDVEAAISSLNNAILE 249
           AKTV T TLK FFS KG VLSAKVSRVPGTSKSSG+GFVTFSSEEDVE AISS NN++LE
Sbjct: 187 AKTVATDTLKNFFSKKGNVLSAKVSRVPGTSKSSGFGFVTFSSEEDVEVAISSFNNSLLE 246

Query: 248 GQKVRVNKA 222
           GQ +RVNKA
Sbjct: 247 GQPIRVNKA 255


>ref|XP_003546870.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Glycine
           max]
          Length = 246

 Score =  303 bits (776), Expect = 5e-80
 Identities = 167/240 (69%), Positives = 186/240 (77%)
 Frame = -1

Query: 941 PTNLLQNPTSKSFTTHFSRSCFEALKPLQTPLGFTLYPPTRLNAVAEGDPSSVATADLSS 762
           P NLL   T  S +T    +   +   L+  L  T     R    A  + ++ AT     
Sbjct: 11  PYNLLSLTTPSSSSTQILFTARPSATHLRPLLLTTRRRSGRRPFAAVAEQAATAT----E 66

Query: 761 KAARRLYVGNIPRTVTSDELQKIVEEHGAVEKAEVMYDKWTQRSRRFAFVTMKTVEDAEA 582
            AARRLYVGNIPRTVT+DEL KIV+EHGAVEKAEVMYDK++ RSRRFAFVTMKTVEDA A
Sbjct: 67  AAARRLYVGNIPRTVTNDELAKIVQEHGAVEKAEVMYDKYSGRSRRFAFVTMKTVEDATA 126

Query: 581 AIEKLNGTQIGEREIKVNVTEKPLQSLDFSVLQAEESRFIDSPHKVYVGNLAKTVTTKTL 402
            IEKLNGT++G REIKVNVTEKPL +LD  +LQAEES FIDSPHKVYVGNLAKTVTT TL
Sbjct: 127 VIEKLNGTELGGREIKVNVTEKPLSTLDLPLLQAEESEFIDSPHKVYVGNLAKTVTTDTL 186

Query: 401 KRFFSDKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEDVEAAISSLNNAILEGQKVRVNKA 222
           K FFS+KGKVLSAKVSRVPGTSKSSGYGFVTF SEEDVEAAISS NN++LEGQ +RVNKA
Sbjct: 187 KNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFPSEEDVEAAISSFNNSLLEGQTIRVNKA 246


>ref|XP_002265629.1| PREDICTED: 30S ribosomal protein 2, chloroplastic [Vitis vinifera]
           gi|297736206|emb|CBI24844.3| unnamed protein product
           [Vitis vinifera]
          Length = 247

 Score =  303 bits (775), Expect = 6e-80
 Identities = 177/257 (68%), Positives = 203/257 (78%), Gaps = 4/257 (1%)
 Frame = -1

Query: 980 MNAISSPFTFSPNPTNLLQNPTSKSFTTHFSRSCFEALKPLQ--TPLGFTLYPPTRLNAV 807
           M AISS F+       LL +PT K+ T H S+   + LKP      + F    P R  AV
Sbjct: 1   MAAISSLFS-----QTLLHHPT-KTLTLH-SKPSIQPLKPFHFLNSVTFKAIKPKRPIAV 53

Query: 806 -AEGDPSSVATADLSSKAARRLYVGNIPRTVTSDELQKIVEEHGAVEKAEVMYDKWTQRS 630
            A    + VAT+D+   AARRLYVGNIPRT+ S EL +IVEEHGAVEKAEVMYDK++ RS
Sbjct: 54  SAVTAEAPVATSDV---AARRLYVGNIPRTLDSAELARIVEEHGAVEKAEVMYDKYSGRS 110

Query: 629 RRFAFVTMKTVEDAEAAIEKLNGTQIGEREIKVNVTEKPLQSLDFSVLQAEESRFIDSPH 450
           RRFAFVTMKTVEDA AAIEKLNGT+IG REIKVN+TEKPL +LD S+LQAEES+FIDSPH
Sbjct: 111 RRFAFVTMKTVEDANAAIEKLNGTEIGGREIKVNITEKPLLTLDMSLLQAEESQFIDSPH 170

Query: 449 KVYVGNLAKTVTTKTLKRFFSDK-GKVLSAKVSRVPGTSKSSGYGFVTFSSEEDVEAAIS 273
           KVYVGNLA+TVTT TL +FFS+K GKVLSAKVSRVPGTSKSSG+GFV+FSSEEDVEAAIS
Sbjct: 171 KVYVGNLARTVTTDTLTQFFSEKGGKVLSAKVSRVPGTSKSSGFGFVSFSSEEDVEAAIS 230

Query: 272 SLNNAILEGQKVRVNKA 222
           S NNA L+GQ++RVNKA
Sbjct: 231 SCNNAFLDGQRIRVNKA 247