BLASTX nr result

ID: Cephaelis21_contig00011086 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00011086
         (579 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328268.1| predicted protein [Populus trichocarpa] gi|2...   157   9e-37
gb|ABK95971.1| unknown [Populus trichocarpa]                          157   9e-37
ref|XP_002279627.1| PREDICTED: pentatricopeptide repeat-containi...   147   1e-33
emb|CAN79511.1| hypothetical protein VITISV_014157 [Vitis vinifera]   145   6e-33
ref|XP_002520932.1| pentatricopeptide repeat-containing protein,...   139   3e-31

>ref|XP_002328268.1| predicted protein [Populus trichocarpa] gi|222837783|gb|EEE76148.1|
           predicted protein [Populus trichocarpa]
          Length = 749

 Score =  157 bits (398), Expect = 9e-37
 Identities = 80/141 (56%), Positives = 103/141 (73%), Gaps = 1/141 (0%)
 Frame = -3

Query: 421 ISSVSKLPNWFLRMKELAANGNWQGVLSCHHELKGAGIQFADPSFFHPVLKACSVISFRY 242
           I S SKLPNW LR+KE +ANG WQ V+S +HE+K AGIQ  D S F P+LKA S +S R+
Sbjct: 6   IVSGSKLPNWILRIKESSANGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLSHRH 65

Query: 241 GKSIHASLVKLGLDSFTSMGNSIVDFYMKSRALSCANDVFDGM-RNKDSVSWNTIIHGHL 65
           GKS+HA L+K G DSFTS+GNSI+ FY++      A DVF+ M R++DSVSWN +IHGHL
Sbjct: 66  GKSLHACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHL 125

Query: 64  DHCASDHGLGLFFQAKISGFK 2
           D+ A   GL  F  A+++GF+
Sbjct: 126 DNGALVAGLWWFTNARVAGFE 146


>gb|ABK95971.1| unknown [Populus trichocarpa]
          Length = 749

 Score =  157 bits (398), Expect = 9e-37
 Identities = 80/141 (56%), Positives = 103/141 (73%), Gaps = 1/141 (0%)
 Frame = -3

Query: 421 ISSVSKLPNWFLRMKELAANGNWQGVLSCHHELKGAGIQFADPSFFHPVLKACSVISFRY 242
           I S SKLPNW LR+KE +ANG WQ V+S +HE+K AGIQ  D S F P+LKA S +S R+
Sbjct: 6   IVSGSKLPNWILRIKESSANGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLSHRH 65

Query: 241 GKSIHASLVKLGLDSFTSMGNSIVDFYMKSRALSCANDVFDGM-RNKDSVSWNTIIHGHL 65
           GKS+HA L+K G DSFTS+GNSI+ FY++      A DVF+ M R++DSVSWN +IHGHL
Sbjct: 66  GKSLHACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHL 125

Query: 64  DHCASDHGLGLFFQAKISGFK 2
           D+ A   GL  F  A+++GF+
Sbjct: 126 DNGALVAGLWWFTNARVAGFE 146


>ref|XP_002279627.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17210-like [Vitis vinifera]
          Length = 742

 Score =  147 bits (371), Expect = 1e-33
 Identities = 74/147 (50%), Positives = 95/147 (64%), Gaps = 2/147 (1%)
 Frame = -3

Query: 436 IHLPIISSVSKLPNWFLRMKELAANGNWQGVLSC--HHELKGAGIQFADPSFFHPVLKAC 263
           +  P      KLPNW L +K+      W    +C  +H++K AG Q  DP+  H +LKAC
Sbjct: 1   MRFPTTPLAPKLPNWNLGIKDSTNRKWWDSWEACSRYHQMKKAGAQLTDPTLVHSILKAC 60

Query: 262 SVISFRYGKSIHASLVKLGLDSFTSMGNSIVDFYMKSRALSCANDVFDGMRNKDSVSWNT 83
           S +  R+GKSIHASL+K G DS TS GNS++DFYMK+ AL  A  VFD MR++DSVSWN 
Sbjct: 61  SSLPVRHGKSIHASLLKQGFDSLTSTGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNI 120

Query: 82  IIHGHLDHCASDHGLGLFFQAKISGFK 2
           +IHGHL   ASD GL  F QA++  F+
Sbjct: 121 MIHGHLSRGASDKGLWWFRQARVIAFE 147



 Score = 55.1 bits (131), Expect = 8e-06
 Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
 Frame = -3

Query: 277 VLKACSVIS-FRYGKSIHASLVKLGLDSFTSMGNSIVDFYMKSRALSCANDVFDGMRNKD 101
           VLKAC+       G+S+H  ++  GLD    +GNSI+D Y K      A   F+ M  ++
Sbjct: 257 VLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRN 316

Query: 100 SVSWNTIIHGHLDHCASDHGLGLFFQAKISGFK 2
           +VSWN+II G +        L LF+    +GF+
Sbjct: 317 TVSWNSIISGLVRTEKHSEALSLFYSMGKAGFR 349


>emb|CAN79511.1| hypothetical protein VITISV_014157 [Vitis vinifera]
          Length = 1007

 Score =  145 bits (365), Expect = 6e-33
 Identities = 74/147 (50%), Positives = 93/147 (63%), Gaps = 2/147 (1%)
 Frame = -3

Query: 436 IHLPIISSVSKLPNWFLRMKELAANGNWQGVLSC--HHELKGAGIQFADPSFFHPVLKAC 263
           +  P      KLPNW L +K+      W    +C  +H++K AG Q  DP+  H +LKAC
Sbjct: 1   MRFPTTPLAPKLPNWNLGIKDSTNRKWWDSWEACSRYHQMKKAGAQLTDPTLVHSILKAC 60

Query: 262 SVISFRYGKSIHASLVKLGLDSFTSMGNSIVDFYMKSRALSCANDVFDGMRNKDSVSWNT 83
           S +  R+GKSIHASL+K G DS TS GNS  DFYMK+ AL  A  VFD MR++DSVSWN 
Sbjct: 61  SSLPVRHGKSIHASLLKQGFDSLTSTGNSXXDFYMKTGALDSALFVFDSMRSRDSVSWNI 120

Query: 82  IIHGHLDHCASDHGLGLFFQAKISGFK 2
           +IHGHL   ASD GL  F QA++  F+
Sbjct: 121 MIHGHLSRGASDXGLWWFRQARVIAFE 147



 Score = 55.1 bits (131), Expect = 8e-06
 Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
 Frame = -3

Query: 277 VLKACSVIS-FRYGKSIHASLVKLGLDSFTSMGNSIVDFYMKSRALSCANDVFDGMRNKD 101
           VLKAC+       G+S+H  ++  GLD    +GNSI+D Y K      A   F+ M  ++
Sbjct: 257 VLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKXDDHESAFKAFNEMPCRN 316

Query: 100 SVSWNTIIHGHLDHCASDHGLGLFFQAKISGFK 2
           +VSWN+II G +        L LF+    +GF+
Sbjct: 317 TVSWNSIISGLVRTEKHSEALSLFYSMGKAGFR 349


>ref|XP_002520932.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539898|gb|EEF41477.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 757

 Score =  139 bits (350), Expect = 3e-31
 Identities = 70/140 (50%), Positives = 96/140 (68%), Gaps = 2/140 (1%)
 Frame = -3

Query: 415 SVSKLPNWFLRMKELAANGNWQGVLSCHHELKGAGIQ--FADPSFFHPVLKACSVISFRY 242
           S S+L +W LR+KEL++N  W  V+S ++E+  AGI     D + F PVLKACS +S+  
Sbjct: 23  STSRLLSWTLRIKELSSNEKWHEVISQYYEITNAGISHHLLDVTLFPPVLKACSYLSYID 82

Query: 241 GKSIHASLVKLGLDSFTSMGNSIVDFYMKSRALSCANDVFDGMRNKDSVSWNTIIHGHLD 62
           GK +HA L+K   DSFTS+GNSI++FY+K   L  A  VFD MR++DSVSWN +IHG LD
Sbjct: 83  GKCLHACLIKTAFDSFTSIGNSILNFYIKCGELDTAVSVFDSMRSRDSVSWNVLIHGCLD 142

Query: 61  HCASDHGLGLFFQAKISGFK 2
           + A   GL  F  A+++GF+
Sbjct: 143 YGALVEGLWQFINARVAGFE 162


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