BLASTX nr result

ID: Cephaelis21_contig00010899 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00010899
         (810 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26949.3| unnamed protein product [Vitis vinifera]              384   e-104
ref|XP_002280133.1| PREDICTED: probable ATP-dependent RNA helica...   384   e-104
ref|XP_004135386.1| PREDICTED: probable ATP-dependent RNA helica...   377   e-102
ref|XP_002526307.1| ATP-dependent RNA helicase, putative [Ricinu...   375   e-102
ref|XP_002315906.1| predicted protein [Populus trichocarpa] gi|2...   370   e-100

>emb|CBI26949.3| unnamed protein product [Vitis vinifera]
          Length = 1181

 Score =  384 bits (986), Expect = e-104
 Identities = 196/274 (71%), Positives = 226/274 (82%), Gaps = 5/274 (1%)
 Frame = +3

Query: 3    VILPPGLQRRVDYHLREYISQKPRGMD-----AFSRSSSNGSIATDEGLFEQPEPLTHSK 167
            VILP GL RRV+ HL EY+SQK    +     AFSRSSS  SIATDEGLFEQPEPL  S+
Sbjct: 188  VILPLGLDRRVEAHLEEYLSQKFTTNENFQDIAFSRSSSTSSIATDEGLFEQPEPLAVSR 247

Query: 168  AATEKFIWRRSLQMQSEQRTWQETHEGQKILEFRKNLPAYKERDAILSAISNKQVVIISG 347
            +  EK +WRRSLQ++++Q+ WQE+ EG+K+LEFR +LPA KE+DA+L+AIS  QVVI+SG
Sbjct: 248  SVIEKIVWRRSLQLRNQQQAWQESTEGRKMLEFRGSLPASKEKDALLTAISGNQVVIVSG 307

Query: 348  ETGCGKTTQIPQFILESEVESIRGAMCNIICTQPRRISAISVSERVAAERGEMLGETVGY 527
            ETGCGKTTQIPQFILESE+ES+RGA+C+IICTQPRRISA+SVSERVAAERGE LGE+VGY
Sbjct: 308  ETGCGKTTQIPQFILESEIESVRGAVCSIICTQPRRISAMSVSERVAAERGEKLGESVGY 367

Query: 528  KVRLEGVRGRDTRLLFCTTGILLRRLLVDRNLKGVTHVIVDEVHERGMNEDFXXXXXXXX 707
            KVRLEG++G+DT LLFCTTGILLRRLLVDRNLKGVTHVIVDE+HERGMNEDF        
Sbjct: 368  KVRLEGMKGKDTCLLFCTTGILLRRLLVDRNLKGVTHVIVDEIHERGMNEDFLLIVLKDL 427

Query: 708  XXXXXXXXXXXMSATLDAELFSSYFSGAPLVHIP 809
                       MSATLDAELFSSYF GAP+VHIP
Sbjct: 428  LPRRPELRLILMSATLDAELFSSYFDGAPVVHIP 461


>ref|XP_002280133.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Vitis
            vinifera]
          Length = 1195

 Score =  384 bits (986), Expect = e-104
 Identities = 196/274 (71%), Positives = 226/274 (82%), Gaps = 5/274 (1%)
 Frame = +3

Query: 3    VILPPGLQRRVDYHLREYISQKPRGMD-----AFSRSSSNGSIATDEGLFEQPEPLTHSK 167
            VILP GL RRV+ HL EY+SQK    +     AFSRSSS  SIATDEGLFEQPEPL  S+
Sbjct: 202  VILPLGLDRRVEAHLEEYLSQKFTTNENFQDIAFSRSSSTSSIATDEGLFEQPEPLAVSR 261

Query: 168  AATEKFIWRRSLQMQSEQRTWQETHEGQKILEFRKNLPAYKERDAILSAISNKQVVIISG 347
            +  EK +WRRSLQ++++Q+ WQE+ EG+K+LEFR +LPA KE+DA+L+AIS  QVVI+SG
Sbjct: 262  SVIEKIVWRRSLQLRNQQQAWQESTEGRKMLEFRGSLPASKEKDALLTAISGNQVVIVSG 321

Query: 348  ETGCGKTTQIPQFILESEVESIRGAMCNIICTQPRRISAISVSERVAAERGEMLGETVGY 527
            ETGCGKTTQIPQFILESE+ES+RGA+C+IICTQPRRISA+SVSERVAAERGE LGE+VGY
Sbjct: 322  ETGCGKTTQIPQFILESEIESVRGAVCSIICTQPRRISAMSVSERVAAERGEKLGESVGY 381

Query: 528  KVRLEGVRGRDTRLLFCTTGILLRRLLVDRNLKGVTHVIVDEVHERGMNEDFXXXXXXXX 707
            KVRLEG++G+DT LLFCTTGILLRRLLVDRNLKGVTHVIVDE+HERGMNEDF        
Sbjct: 382  KVRLEGMKGKDTCLLFCTTGILLRRLLVDRNLKGVTHVIVDEIHERGMNEDFLLIVLKDL 441

Query: 708  XXXXXXXXXXXMSATLDAELFSSYFSGAPLVHIP 809
                       MSATLDAELFSSYF GAP+VHIP
Sbjct: 442  LPRRPELRLILMSATLDAELFSSYFDGAPVVHIP 475


>ref|XP_004135386.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Cucumis
           sativus]
          Length = 1181

 Score =  377 bits (969), Expect = e-102
 Identities = 190/273 (69%), Positives = 220/273 (80%), Gaps = 4/273 (1%)
 Frame = +3

Query: 3   VILPPGLQRRVDYHLREYISQKPRGMD----AFSRSSSNGSIATDEGLFEQPEPLTHSKA 170
           V LPPGL RRVD HL E++SQK R       + SR+SS+GSIATDEGLFEQPEP   SKA
Sbjct: 179 VSLPPGLLRRVDEHLGEFLSQKSRCKGFQDISVSRTSSSGSIATDEGLFEQPEPQGSSKA 238

Query: 171 ATEKFIWRRSLQMQSEQRTWQETHEGQKILEFRKNLPAYKERDAILSAISNKQVVIISGE 350
             EK +WRRS  ++ +Q+ WQ + EG++ILEFR+NLPAYKE+DA+L  IS  QV+IISGE
Sbjct: 239 VMEKILWRRSSHLRDQQQAWQSSLEGREILEFRRNLPAYKEKDALLDTISQNQVIIISGE 298

Query: 351 TGCGKTTQIPQFILESEVESIRGAMCNIICTQPRRISAISVSERVAAERGEMLGETVGYK 530
           TGCGKTTQ+PQFILESE+ES+RGA+C+IICTQPRRISA+SVSERVA ERGE LGE+VGYK
Sbjct: 299 TGCGKTTQVPQFILESEIESLRGAVCSIICTQPRRISAMSVSERVAFERGEKLGESVGYK 358

Query: 531 VRLEGVRGRDTRLLFCTTGILLRRLLVDRNLKGVTHVIVDEVHERGMNEDFXXXXXXXXX 710
           VRLEG++GRDT LLFCTTGILLRRLLVDRNLKG+THVIVDE+HERGMNEDF         
Sbjct: 359 VRLEGMKGRDTHLLFCTTGILLRRLLVDRNLKGITHVIVDEIHERGMNEDFLLIVLKDLL 418

Query: 711 XXXXXXXXXXMSATLDAELFSSYFSGAPLVHIP 809
                     MSATLDAELFSSYF GA ++HIP
Sbjct: 419 PRRPELRLILMSATLDAELFSSYFGGAQIIHIP 451


>ref|XP_002526307.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223534388|gb|EEF36096.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1172

 Score =  375 bits (962), Expect = e-102
 Identities = 193/274 (70%), Positives = 218/274 (79%), Gaps = 5/274 (1%)
 Frame = +3

Query: 3    VILPPGLQRRVDYHLREYISQKPRGMDAF-----SRSSSNGSIATDEGLFEQPEPLTHSK 167
            V LP GLQ+RVD +L EY+ Q+    + F     SRSSSN S+ATDEGLFE  E L  SK
Sbjct: 183  VNLPLGLQKRVDAYLGEYLFQRSNTKERFPDFSSSRSSSNSSLATDEGLFEPTESLASSK 242

Query: 168  AATEKFIWRRSLQMQSEQRTWQETHEGQKILEFRKNLPAYKERDAILSAISNKQVVIISG 347
            A  EK + RRSLQ++ +Q  WQE+ EG+KILEFRKNLPAYKE+DAI +AIS  QVVIISG
Sbjct: 243  AVMEKILQRRSLQLRDQQHAWQESPEGRKILEFRKNLPAYKEKDAISTAISQNQVVIISG 302

Query: 348  ETGCGKTTQIPQFILESEVESIRGAMCNIICTQPRRISAISVSERVAAERGEMLGETVGY 527
            ETGCGKTTQIPQFILESE+ES+RGA+CNIICTQPRRISA+SVSER+A+ERGE LGE VGY
Sbjct: 303  ETGCGKTTQIPQFILESEIESVRGAVCNIICTQPRRISAMSVSERIASERGEKLGECVGY 362

Query: 528  KVRLEGVRGRDTRLLFCTTGILLRRLLVDRNLKGVTHVIVDEVHERGMNEDFXXXXXXXX 707
            KVRLEG+RGRDT LLFCTTGILLRRLLVDRNLKG+THVIVDE+HERGMNEDF        
Sbjct: 363  KVRLEGIRGRDTHLLFCTTGILLRRLLVDRNLKGITHVIVDEIHERGMNEDFLLIVLKDL 422

Query: 708  XXXXXXXXXXXMSATLDAELFSSYFSGAPLVHIP 809
                       MSATLDAELFSSYF GAP++ IP
Sbjct: 423  LPHRPDLRLILMSATLDAELFSSYFDGAPILRIP 456


>ref|XP_002315906.1| predicted protein [Populus trichocarpa] gi|222864946|gb|EEF02077.1|
           predicted protein [Populus trichocarpa]
          Length = 1053

 Score =  370 bits (950), Expect = e-100
 Identities = 190/273 (69%), Positives = 221/273 (80%), Gaps = 4/273 (1%)
 Frame = +3

Query: 3   VILPPGLQRRVDYHLREYISQKPR----GMDAFSRSSSNGSIATDEGLFEQPEPLTHSKA 170
           V LP GL +RVD +L +Y+ Q+ R      D FSRSSS+ S++TD+GLFEQPEPL  SKA
Sbjct: 66  VNLPLGLLQRVDAYLGDYLYQRSRINSNFPDTFSRSSSS-SLSTDDGLFEQPEPLASSKA 124

Query: 171 ATEKFIWRRSLQMQSEQRTWQETHEGQKILEFRKNLPAYKERDAILSAISNKQVVIISGE 350
            TEK +WRRS+Q+  +Q+ WQE+ EG K+LEFRK LPAYKE+DAIL+AIS  Q+VIISG 
Sbjct: 125 VTEKILWRRSMQLCDQQQAWQESPEGCKMLEFRKTLPAYKEKDAILAAISQNQIVIISGA 184

Query: 351 TGCGKTTQIPQFILESEVESIRGAMCNIICTQPRRISAISVSERVAAERGEMLGETVGYK 530
           TGCGKTTQIPQFILESEVES+RGA+CNIICTQPRRISA+SVSER+A+ERGE LGE VGYK
Sbjct: 185 TGCGKTTQIPQFILESEVESVRGAVCNIICTQPRRISAMSVSERIASERGEKLGERVGYK 244

Query: 531 VRLEGVRGRDTRLLFCTTGILLRRLLVDRNLKGVTHVIVDEVHERGMNEDFXXXXXXXXX 710
           VRLEGV+G+DT LLFCTTGILLRRLLVDR+LKG+THVIVDE+HERGMNEDF         
Sbjct: 245 VRLEGVKGKDTHLLFCTTGILLRRLLVDRSLKGITHVIVDEIHERGMNEDFLLIVLKDLL 304

Query: 711 XXXXXXXXXXMSATLDAELFSSYFSGAPLVHIP 809
                     MSATLDAELFSSYF GAP++ IP
Sbjct: 305 PHRPELKLILMSATLDAELFSSYFDGAPILRIP 337


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