BLASTX nr result

ID: Cephaelis21_contig00010886 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00010886
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ...   107   1e-21
emb|CAN65166.1| hypothetical protein VITISV_029400 [Vitis vinifera]    65   2e-19
emb|CBI40707.3| unnamed protein product [Vitis vinifera]               92   5e-17
ref|XP_003588310.1| hypothetical protein MTR_1g005810 [Medicago ...    58   1e-16
emb|CBI31112.3| unnamed protein product [Vitis vinifera]               75   5e-12

>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
            gi|355477385|gb|AES58588.1| Ribosomal protein S10
            [Medicago truncatula]
          Length = 1152

 Score =  107 bits (267), Expect = 1e-21
 Identities = 66/131 (50%), Positives = 74/131 (56%), Gaps = 1/131 (0%)
 Frame = -2

Query: 468  QKDCRLDAPTPPCLALYLTLXXXXXXXXXXXKCYKVYTI*EVTLRSGGKPLD*STRVNCA 289
            QKDCR +APTPPCLALYLTL                  I EV+  +G             
Sbjct: 910  QKDCRQNAPTPPCLALYLTLRIRGYAAWER--------IKEVSDTTGN------------ 949

Query: 288  *TLRKTAPIYERN**MSRLPLSIAKCDLGHDGSLRASVGKRSPEYSTRSP-FLAVMGSTC 112
              L++    +         P    +CDLGHDG LRASVGKRSPEYSTRSP FLA MGSTC
Sbjct: 950  --LKEWRQSF---------PFRFTECDLGHDGGLRASVGKRSPEYSTRSPFFLAAMGSTC 998

Query: 111  EQGKPNGNQKR 79
            +QGKPNGNQKR
Sbjct: 999  KQGKPNGNQKR 1009


>emb|CAN65166.1| hypothetical protein VITISV_029400 [Vitis vinifera]
          Length = 267

 Score = 64.7 bits (156), Expect(2) = 2e-19
 Identities = 34/59 (57%), Positives = 38/59 (64%), Gaps = 11/59 (18%)
 Frame = +2

Query: 89  FPLGLPCSQ-----------VDPMTARKGDLVLYSGDLFPTEARKLPSCPRSHFAIERG 232
           +P+GL  S            VDPM ARKGDLVLYSGDLFPTEARKLPSC +  F   +G
Sbjct: 94  YPIGLEASYLSPISRPFNFLVDPMAARKGDLVLYSGDLFPTEARKLPSCTQITFRESKG 152



 Score = 55.8 bits (133), Expect(2) = 2e-19
 Identities = 28/40 (70%), Positives = 28/40 (70%)
 Frame = +3

Query: 222 SKGEAYXXXXXXXXXXXFYEASKHSSLALINQEVCRHSLR 341
           SKGEAY           FYEASKHSSLALINQE CRHSLR
Sbjct: 150 SKGEAYSSISSSRRSVRFYEASKHSSLALINQEFCRHSLR 189


>emb|CBI40707.3| unnamed protein product [Vitis vinifera]
          Length = 574

 Score = 92.0 bits (227), Expect = 5e-17
 Identities = 43/50 (86%), Positives = 44/50 (88%)
 Frame = -2

Query: 216 KCDLGHDGSLRASVGKRSPEYSTRSPFLAVMGSTCEQGKPNGNQKRAVPH 67
           +CDLGHDGSLRASVGKRS EYSTRSPFLA MGSTCEQGKPNGNQK    H
Sbjct: 523 ECDLGHDGSLRASVGKRSSEYSTRSPFLATMGSTCEQGKPNGNQKTGGYH 572


>ref|XP_003588310.1| hypothetical protein MTR_1g005810 [Medicago truncatula]
           gi|355477358|gb|AES58561.1| hypothetical protein
           MTR_1g005810 [Medicago truncatula]
          Length = 146

 Score = 58.2 bits (139), Expect(2) = 1e-16
 Identities = 26/29 (89%), Positives = 27/29 (93%)
 Frame = +1

Query: 220 DRKGKPTHLSVPLVDRCGFTKRLSTVHSR 306
           +RKGKPTH S PLVDRCGFTKRLSTVHSR
Sbjct: 118 NRKGKPTHPSAPLVDRCGFTKRLSTVHSR 146



 Score = 53.1 bits (126), Expect(2) = 1e-16
 Identities = 24/33 (72%), Positives = 26/33 (78%)
 Frame = +2

Query: 134 RKGDLVLYSGDLFPTEARKLPSCPRSHFAIERG 232
           +KGDLVLYSG  FPTEARK PSCPRSH    +G
Sbjct: 89  KKGDLVLYSGIFFPTEARKPPSCPRSHSVNRKG 121


>emb|CBI31112.3| unnamed protein product [Vitis vinifera]
          Length = 2099

 Score = 75.5 bits (184), Expect = 5e-12
 Identities = 35/36 (97%), Positives = 35/36 (97%)
 Frame = -2

Query: 189  LRASVGKRSPEYSTRSPFLAVMGSTCEQGKPNGNQK 82
            LRASVGKRSPEYSTRSPFLA MGSTCEQGKPNGNQK
Sbjct: 1775 LRASVGKRSPEYSTRSPFLAAMGSTCEQGKPNGNQK 1810


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