BLASTX nr result

ID: Cephaelis21_contig00010866 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00010866
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...   108   3e-22
gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]         103   2e-20
emb|CCH50976.1| T4.15 [Malus x robusta]                               102   3e-20
emb|CCH50954.1| T1.2 [Malus x robusta]                                 99   3e-19
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas...    94   1e-17

>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           x domestica]
          Length = 622

 Score =  108 bits (271), Expect = 3e-22
 Identities = 51/78 (65%), Positives = 65/78 (83%)
 Frame = -2

Query: 236 RLRLETSISENQFGFMSGRSTTEAIHLIRKLCDHYRKRKQDLYMVFIDLEKAYDRVNRNV 57
           RLR ET +S+NQFGFM GRST EAI+L+R+L + YR  K+DL+MVFIDLEKAYDRV+R++
Sbjct: 261 RLRQETRVSDNQFGFMPGRSTMEAIYLLRRLMERYRDGKKDLHMVFIDLEKAYDRVSRDI 320

Query: 56  MWSVLEKKGVSEIYIEFI 3
           +W +LEKKGV   YI+ I
Sbjct: 321 IWRILEKKGVRVAYIQAI 338


>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 562

 Score =  103 bits (256), Expect = 2e-20
 Identities = 50/77 (64%), Positives = 60/77 (77%)
 Frame = -2

Query: 233 LRLETSISENQFGFMSGRSTTEAIHLIRKLCDHYRKRKQDLYMVFIDLEKAYDRVNRNVM 54
           LR ET ++ENQFGFMSGRS TEAI+L+R++ + YR  K+DL+MVFIDLEKAYDRV R V+
Sbjct: 152 LRKETQVTENQFGFMSGRSITEAIYLLRRMMERYRSNKRDLHMVFIDLEKAYDRVPREVL 211

Query: 53  WSVLEKKGVSEIYIEFI 3
           W VLEK  V   YI  I
Sbjct: 212 WKVLEKMRVRIAYIRAI 228


>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score =  102 bits (254), Expect = 3e-20
 Identities = 47/69 (68%), Positives = 59/69 (85%)
 Frame = -2

Query: 236 RLRLETSISENQFGFMSGRSTTEAIHLIRKLCDHYRKRKQDLYMVFIDLEKAYDRVNRNV 57
           RLR ET +S+NQFGFM GRST EAI+L+R+L + YR  K+DL+MVFIDLEKAYDRV R++
Sbjct: 657 RLRQETRVSDNQFGFMPGRSTMEAIYLLRRLMERYRDGKKDLHMVFIDLEKAYDRVPRDI 716

Query: 56  MWSVLEKKG 30
           +W +LEKKG
Sbjct: 717 LWRILEKKG 725


>emb|CCH50954.1| T1.2 [Malus x robusta]
          Length = 554

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 48/78 (61%), Positives = 60/78 (76%)
 Frame = -2

Query: 236 RLRLETSISENQFGFMSGRSTTEAIHLIRKLCDHYRKRKQDLYMVFIDLEKAYDRVNRNV 57
           RLR +T +S+NQF FM G ST EAI+L+RKL + YR  K DL+MVFIDLEK YDRV R++
Sbjct: 280 RLRQKTRVSDNQFKFMPGCSTMEAIYLLRKLMEKYRDGKNDLHMVFIDLEKVYDRVPRDI 339

Query: 56  MWSVLEKKGVSEIYIEFI 3
           +W +LEKKGV   YI+ I
Sbjct: 340 LWRILEKKGVRVAYIQAI 357


>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 517

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 44/78 (56%), Positives = 58/78 (74%)
 Frame = -2

Query: 236 RLRLETSISENQFGFMSGRSTTEAIHLIRKLCDHYRKRKQDLYMVFIDLEKAYDRVNRNV 57
           RLR ET +++NQFGFM GRST EAI+L++++ + YR  K+DL++VF DLEK YDRV R +
Sbjct: 239 RLRKETLVTDNQFGFMLGRSTMEAIYLLQRVMERYRTDKKDLHLVFFDLEKGYDRVPREI 298

Query: 56  MWSVLEKKGVSEIYIEFI 3
           +W  LEKK V   YI  I
Sbjct: 299 LWKALEKKRVRIAYIRAI 316


Top