BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00010825
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28010.3| unnamed protein product [Vitis vinifera]              129   2e-28
emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera]   128   5e-28
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme...   123   2e-26
ref|XP_003517644.1| PREDICTED: probable RNA-dependent RNA polyme...   118   6e-25
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ...   114   8e-24

>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
          Length = 929

 Score =  129 bits (324), Expect = 2e-28
 Identities = 69/148 (46%), Positives = 89/148 (60%), Gaps = 12/148 (8%)
 Frame = -2

Query: 432 LSKISSMVLEDVISPDQADDIAKMKDLPIHVFESNIWETYGKTCCDLSERIQITDWDSGK 253
           LS I     ED++S   A++I K+K+LP+ VFE+ +W   G+      +R +  DWDS K
Sbjct: 117 LSYIGDKRPEDLLS---AEEILKLKNLPMGVFETEVWNNLGRKFIKEEDRQRSFDWDSDK 173

Query: 252 THFYECIVYQDGSYKLKGPCLNSTRTHLQRKLGDNNVLIVKFVE------------EDRA 109
           TH Y C V  DGSY+ KGP LN TRTHLQR LGD N+L+VKF E            +  A
Sbjct: 174 THIYHCHVSPDGSYRFKGPYLNKTRTHLQRVLGDENILLVKFAEDVTDRSSLNCSTDSNA 233

Query: 108 YIERICRKGIIVGSWRYRFFVFKDESKD 25
              +I R+GI VG  +YRFFVFKD  K+
Sbjct: 234 SYNKIAREGIFVGLRQYRFFVFKDGGKE 261


>emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera]
          Length = 1202

 Score =  128 bits (321), Expect = 5e-28
 Identities = 66/139 (47%), Positives = 86/139 (61%), Gaps = 12/139 (8%)
 Frame = -2

Query: 405 EDVISPDQADDIAKMKDLPIHVFESNIWETYGKTCCDLSERIQITDWDSGKTHFYECIVY 226
           ED++S   A++I K+K+LP+ VFE+ +W   G+      +R +  DWDS KTH Y C V 
Sbjct: 489 EDLLS---AEEILKLKNLPMGVFETEVWNNLGRKFIKEEDRQRSFDWDSDKTHIYHCHVS 545

Query: 225 QDGSYKLKGPCLNSTRTHLQRKLGDNNVLIVKFVE------------EDRAYIERICRKG 82
            DGSY+ KGP LN TRTHLQR LGD N+L+VKF E            +  A   +I R+G
Sbjct: 546 PDGSYRFKGPYLNKTRTHLQRVLGDENILLVKFAEDVTDRSSLNCSTDSNASYNKIAREG 605

Query: 81  IIVGSWRYRFFVFKDESKD 25
           I VG  +YRFFVFKD  K+
Sbjct: 606 IFVGLRQYRFFVFKDGGKE 624


>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
           vinifera]
          Length = 943

 Score =  123 bits (308), Expect = 2e-26
 Identities = 69/156 (44%), Positives = 90/156 (57%), Gaps = 20/156 (12%)
 Frame = -2

Query: 432 LSKISSMVLEDVISPDQADDIAKMKDLPIHVFESNIWETYGKTCCDLSERIQITDWDSGK 253
           LS I  +  ED++S   A++I K+K+LP+ VFE+ +W   G+      +R +  DWDS K
Sbjct: 117 LSYIGELRPEDLLS---AEEILKLKNLPMGVFETEVWNNLGRKFIKEEDRQRSFDWDSDK 173

Query: 252 THFYECIVYQDGSYKLK--------GPCLNSTRTHLQRKLGDNNVLIVKFVE-------- 121
           TH Y C V  DGSY+ K        GP LN TRTHLQR LGD N+L+VKF E        
Sbjct: 174 THIYHCHVSPDGSYRFKVCISSSLNGPYLNKTRTHLQRVLGDENILLVKFAEDVTDRSSL 233

Query: 120 ----EDRAYIERICRKGIIVGSWRYRFFVFKDESKD 25
               +  A   +I R+GI VG  +YRFFVFKD  K+
Sbjct: 234 NCSTDSNASYNKIAREGIFVGLRQYRFFVFKDGGKE 269


>ref|XP_003517644.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Glycine
           max]
          Length = 953

 Score =  118 bits (295), Expect = 6e-25
 Identities = 67/145 (46%), Positives = 89/145 (61%), Gaps = 13/145 (8%)
 Frame = -2

Query: 432 LSKISSMVLEDVISPDQADDIAKMKDLPIHVFESNIWETYGKTCC-DLSERIQITDWDSG 256
           LS I    LE+ I+  +   I  +KDLP+  FE  IWE +G+ C  D S+R Q+ +W+SG
Sbjct: 104 LSYIGRESLENCITDAK---IRSLKDLPMAKFEKTIWEDFGEKCIYDQSDR-QLVNWNSG 159

Query: 255 KTHFYECIVYQDGSYKLKGPCLNSTRTHLQRKLGDNNVLIVKF------------VEEDR 112
           +TH Y+C V+ DG+ + KGP L STRTHLQ+ LGD+NVL+VKF             EE  
Sbjct: 160 RTHVYQCFVFPDGNLRFKGPILQSTRTHLQKTLGDDNVLLVKFAEDGSGKNFRTHAEEAN 219

Query: 111 AYIERICRKGIIVGSWRYRFFVFKD 37
           A   +  ++GI VG   YRFFVFKD
Sbjct: 220 ALYGKFGKEGIRVGLRLYRFFVFKD 244


>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
           RNA polymerase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 981

 Score =  114 bits (285), Expect = 8e-24
 Identities = 58/129 (44%), Positives = 80/129 (62%), Gaps = 10/129 (7%)
 Frame = -2

Query: 381 ADDIAKMKDLPIHVFESNIWETYGKTCCDLSERIQITDWDSGKTHFYECIVYQDGSYKLK 202
           AD+I   KDLP+  +E+ +W+  G+  C  ++R ++  WDSGKTH+Y+C V  DGSY  K
Sbjct: 170 ADEIRLWKDLPMVAYEAAVWDRLGRRYCPQTDR-RMLQWDSGKTHYYQCHVAPDGSYTFK 228

Query: 201 GPCLNSTRTHLQRKLGDNNVLIVKFVE---------EDRAY-IERICRKGIIVGSWRYRF 52
           GP L  T THL + LGD NVL VKF +          DR +  + I + GI++G  RY+F
Sbjct: 229 GPLLEHTGTHLHKVLGDENVLTVKFADVPKNSSTYSNDRYFTYKEIAKNGIMIGLRRYQF 288

Query: 51  FVFKDESKD 25
           FVFKD  K+
Sbjct: 289 FVFKDGGKE 297