BLASTX nr result

ID: Cephaelis21_contig00010818 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00010818
         (724 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238335.1| serine hydroxymethyltransferase 4 [Glycine m...    47   8e-07
ref|XP_002309513.1| serine hydroxymethyltransferase 8 [Populus t...    43   1e-06
ref|XP_004147741.1| PREDICTED: serine hydroxymethyltransferase, ...    43   1e-06
ref|XP_002519806.1| serine hydroxymethyltransferase, putative [R...    43   1e-06
ref|XP_002277146.1| PREDICTED: serine hydroxymethyltransferase, ...    43   2e-06

>ref|NP_001238335.1| serine hydroxymethyltransferase 4 [Glycine max]
           gi|222142535|gb|ACM45954.1| serine
           hydroxymethyltransferase 4 [Glycine max]
          Length = 536

 Score = 47.4 bits (111), Expect(2) = 8e-07
 Identities = 25/37 (67%), Positives = 28/37 (75%)
 Frame = -3

Query: 113 PTFSRLITPHVCF*IADSVGAFLMADMAHISGLVAAS 3
           P   +LIT ++   IAD VGAFLM DMAHISGLVAAS
Sbjct: 267 PRMRKLITSYMHGKIADEVGAFLMMDMAHISGLVAAS 303



 Score = 31.6 bits (70), Expect(2) = 8e-07
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -1

Query: 232 AYPRDFDYPRMRKV 191
           AYPRD DYPRMRK+
Sbjct: 259 AYPRDIDYPRMRKL 272


>ref|XP_002309513.1| serine hydroxymethyltransferase 8 [Populus trichocarpa]
           gi|222855489|gb|EEE93036.1| serine
           hydroxymethyltransferase 8 [Populus trichocarpa]
          Length = 529

 Score = 43.1 bits (100), Expect(2) = 1e-06
 Identities = 21/23 (91%), Positives = 22/23 (95%)
 Frame = -3

Query: 71  IADSVGAFLMADMAHISGLVAAS 3
           IAD+VGAFLM DMAHISGLVAAS
Sbjct: 274 IADAVGAFLMMDMAHISGLVAAS 296



 Score = 35.4 bits (80), Expect(2) = 1e-06
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = -1

Query: 232 AYPRDFDYPRMRKVQFLLSCF 170
           AYPRDFDYPRMRK+   +  F
Sbjct: 261 AYPRDFDYPRMRKIADAVGAF 281


>ref|XP_004147741.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like
           [Cucumis sativus] gi|449519543|ref|XP_004166794.1|
           PREDICTED: serine hydroxymethyltransferase,
           mitochondrial-like [Cucumis sativus]
          Length = 528

 Score = 43.1 bits (100), Expect(2) = 1e-06
 Identities = 21/23 (91%), Positives = 22/23 (95%)
 Frame = -3

Query: 71  IADSVGAFLMADMAHISGLVAAS 3
           IAD+VGAFLM DMAHISGLVAAS
Sbjct: 273 IADAVGAFLMMDMAHISGLVAAS 295



 Score = 35.4 bits (80), Expect(2) = 1e-06
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = -1

Query: 232 AYPRDFDYPRMRKVQFLLSCF 170
           AYPRDFDYPRMRK+   +  F
Sbjct: 260 AYPRDFDYPRMRKIADAVGAF 280


>ref|XP_002519806.1| serine hydroxymethyltransferase, putative [Ricinus communis]
           gi|223541045|gb|EEF42602.1| serine
           hydroxymethyltransferase, putative [Ricinus communis]
          Length = 527

 Score = 43.1 bits (100), Expect(2) = 1e-06
 Identities = 21/23 (91%), Positives = 22/23 (95%)
 Frame = -3

Query: 71  IADSVGAFLMADMAHISGLVAAS 3
           IAD+VGAFLM DMAHISGLVAAS
Sbjct: 272 IADAVGAFLMMDMAHISGLVAAS 294



 Score = 35.4 bits (80), Expect(2) = 1e-06
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = -1

Query: 232 AYPRDFDYPRMRKVQFLLSCF 170
           AYPRDFDYPRMRK+   +  F
Sbjct: 259 AYPRDFDYPRMRKIADAVGAF 279


>ref|XP_002277146.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial [Vitis
           vinifera] gi|296081614|emb|CBI20619.3| unnamed protein
           product [Vitis vinifera]
          Length = 528

 Score = 42.7 bits (99), Expect(2) = 2e-06
 Identities = 21/23 (91%), Positives = 21/23 (91%)
 Frame = -3

Query: 71  IADSVGAFLMADMAHISGLVAAS 3
           IAD VGAFLM DMAHISGLVAAS
Sbjct: 273 IADGVGAFLMMDMAHISGLVAAS 295



 Score = 34.7 bits (78), Expect(2) = 2e-06
 Identities = 13/14 (92%), Positives = 14/14 (100%)
 Frame = -1

Query: 232 AYPRDFDYPRMRKV 191
           AYPRDFDYPRMRK+
Sbjct: 260 AYPRDFDYPRMRKI 273


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