BLASTX nr result

ID: Cephaelis21_contig00010749 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00010749
         (1682 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330073.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-30
ref|XP_003633353.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   135   3e-29
ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containi...   135   3e-29
ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containi...   126   2e-26
ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containi...   126   2e-26

>ref|XP_002330073.1| predicted protein [Populus trichocarpa] gi|222871498|gb|EEF08629.1|
           predicted protein [Populus trichocarpa]
          Length = 793

 Score =  139 bits (349), Expect = 3e-30
 Identities = 67/105 (63%), Positives = 84/105 (80%)
 Frame = -3

Query: 528 MDEKDLISWTALIPCYKQNKMYEEAFNSFVQMWYNGSNVDEIVIVSVLSACANLLVVKIG 349
           M +KDL+SW+ALI CY+QN+MYEEA   F +M  NG  VDE+V++SVLSAC+ LLVV  G
Sbjct: 249 MKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITG 308

Query: 348 EVAHGMVVRNGFQSYVNLQNALIHMYSSCGEVVVAKKLFHSSCTL 214
           ++ HG+VV+ G ++YVNLQNALIHMYSSC EVV A+KLF  SC L
Sbjct: 309 KLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCL 353



 Score = 67.4 bits (163), Expect = 1e-08
 Identities = 35/99 (35%), Positives = 55/99 (55%)
 Frame = -3

Query: 528 MDEKDLISWTALIPCYKQNKMYEEAFNSFVQMWYNGSNVDEIVIVSVLSACANLLVVKIG 349
           M +KD +SW+A+I  Y Q   + E    F +M   G+  DE ++VSV+SAC +L  +  G
Sbjct: 381 MPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQG 440

Query: 348 EVAHGMVVRNGFQSYVNLQNALIHMYSSCGEVVVAKKLF 232
           +  H  + +NG +  + L   LI+MY   G V  A ++F
Sbjct: 441 KWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVF 479


>ref|XP_003633353.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g14470-like [Vitis vinifera]
          Length = 273

 Score =  135 bits (340), Expect = 3e-29
 Identities = 64/105 (60%), Positives = 84/105 (80%)
 Frame = -3

Query: 528 MDEKDLISWTALIPCYKQNKMYEEAFNSFVQMWYNGSNVDEIVIVSVLSACANLLVVKIG 349
           MDEKD++SW+ALI  Y+QN MYEEA   F++M  NG  +DE+V+VSVLSAC +L +VKIG
Sbjct: 72  MDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACTHLSIVKIG 131

Query: 348 EVAHGMVVRNGFQSYVNLQNALIHMYSSCGEVVVAKKLFHSSCTL 214
           ++ HG+V+R G +SYVNLQNALIHMYS  GE++ A+KLF+ S  L
Sbjct: 132 KMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAEKLFNGSHNL 176


>ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 808

 Score =  135 bits (340), Expect = 3e-29
 Identities = 68/121 (56%), Positives = 92/121 (76%)
 Frame = -3

Query: 528 MDEKDLISWTALIPCYKQNKMYEEAFNSFVQMWYNGSNVDEIVIVSVLSACANLLVVKIG 349
           MDEKD++SW+ALI  Y+QN MYEEA   F++M  NG  +DE+V+VSVLSACA+L +VK G
Sbjct: 264 MDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTG 323

Query: 348 EVAHGMVVRNGFQSYVNLQNALIHMYSSCGEVVVAKKLFHSSCTLLGIPFAWLHEALVSH 169
           ++ HG+V+R G +SYVNLQNALIHMYS  GE++ A+KLF+ S  L  I  +W   +++S 
Sbjct: 324 KMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQI--SW--NSMISG 379

Query: 168 C 166
           C
Sbjct: 380 C 380



 Score = 70.9 bits (172), Expect = 1e-09
 Identities = 36/104 (34%), Positives = 58/104 (55%)
 Frame = -3

Query: 540 IMPLMDEKDLISWTALIPCYKQNKMYEEAFNSFVQMWYNGSNVDEIVIVSVLSACANLLV 361
           +  +M EKD++SW+A+I  Y Q+  + E    F +M       DE ++VSV+SAC +L  
Sbjct: 392 LFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAA 451

Query: 360 VKIGEVAHGMVVRNGFQSYVNLQNALIHMYSSCGEVVVAKKLFH 229
           +  G+  H  + +NG +  V L   L+ MY  CG V  A ++F+
Sbjct: 452 LDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFN 495


>ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 953

 Score =  126 bits (316), Expect = 2e-26
 Identities = 59/105 (56%), Positives = 82/105 (78%)
 Frame = -3

Query: 528 MDEKDLISWTALIPCYKQNKMYEEAFNSFVQMWYNGSNVDEIVIVSVLSACANLLVVKIG 349
           M EKD+++W+ALI C++QN+MYEEA  +FV M   G  VDE+V VS LSACANLLVV +G
Sbjct: 336 MLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMG 395

Query: 348 EVAHGMVVRNGFQSYVNLQNALIHMYSSCGEVVVAKKLFHSSCTL 214
           ++ H + ++ G +SY+NLQNALI+MYS CG+++VA+KLF  +  L
Sbjct: 396 KLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLL 440



 Score = 81.3 bits (199), Expect = 7e-13
 Identities = 44/112 (39%), Positives = 63/112 (56%)
 Frame = -3

Query: 564 NAKQFFARIMPLMDEKDLISWTALIPCYKQNKMYEEAFNSFVQMWYNGSNVDEIVIVSVL 385
           NAK  F      M EKD++SW+++I  Y QN +++E    F +M  +G   DE  +VSV+
Sbjct: 460 NAKAIFDS----MPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVI 515

Query: 384 SACANLLVVKIGEVAHGMVVRNGFQSYVNLQNALIHMYSSCGEVVVAKKLFH 229
           SACA L  ++ G+  H  + RNG    V L   LI MY  CG V  A ++F+
Sbjct: 516 SACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFY 567


>ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 809

 Score =  126 bits (316), Expect = 2e-26
 Identities = 59/105 (56%), Positives = 82/105 (78%)
 Frame = -3

Query: 528 MDEKDLISWTALIPCYKQNKMYEEAFNSFVQMWYNGSNVDEIVIVSVLSACANLLVVKIG 349
           M EKD+++W+ALI C++QN+MYEEA  +FV M   G  VDE+V VS LSACANLLVV +G
Sbjct: 201 MLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMG 260

Query: 348 EVAHGMVVRNGFQSYVNLQNALIHMYSSCGEVVVAKKLFHSSCTL 214
           ++ H + ++ G +SY+NLQNALI+MYS CG+++VA+KLF  +  L
Sbjct: 261 KLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLL 305



 Score = 81.3 bits (199), Expect = 7e-13
 Identities = 44/112 (39%), Positives = 63/112 (56%)
 Frame = -3

Query: 564 NAKQFFARIMPLMDEKDLISWTALIPCYKQNKMYEEAFNSFVQMWYNGSNVDEIVIVSVL 385
           NAK  F      M EKD++SW+++I  Y QN +++E    F +M  +G   DE  +VSV+
Sbjct: 325 NAKAIFDS----MPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVI 380

Query: 384 SACANLLVVKIGEVAHGMVVRNGFQSYVNLQNALIHMYSSCGEVVVAKKLFH 229
           SACA L  ++ G+  H  + RNG    V L   LI MY  CG V  A ++F+
Sbjct: 381 SACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFY 432


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