BLASTX nr result

ID: Cephaelis21_contig00010553 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00010553
         (1090 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526000.1| cleavage and polyadenylation specificity fac...   279   1e-72
ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261...   270   4e-70
ref|XP_003529221.1| PREDICTED: E3 ubiquitin protein ligase RIE1-...   270   6e-70
ref|XP_003518612.1| PREDICTED: E3 ubiquitin protein ligase RIE1-...   265   1e-68
ref|XP_002314782.1| predicted protein [Populus trichocarpa] gi|2...   263   6e-68

>ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
            communis] gi|223534732|gb|EEF36424.1| cleavage and
            polyadenylation specificity factor, putative [Ricinus
            communis]
          Length = 963

 Score =  279 bits (713), Expect = 1e-72
 Identities = 132/194 (68%), Positives = 145/194 (74%)
 Frame = +2

Query: 59   SNRSSFVKRCESLNTMASFVWWIVGFYWVVSGGEALLQGAPRLYWLXXXXXXXXXXXXXX 238
            SNRSS +KRCES+NTMASF+WWIVGFYWVVSGG+ LLQ AP LYWL              
Sbjct: 769  SNRSSVIKRCESVNTMASFLWWIVGFYWVVSGGDELLQNAPHLYWLAVVFLAFDVFFAIF 828

Query: 239  CVVXXXXXXXXXXXXXXXXXXXXYAVAGQEGASEADLSTLPKYRFEISQDEGKPSGGFGK 418
            CVV                    YAVAGQEGASEADLS LPKYRF+++ +E KPS G GK
Sbjct: 829  CVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFQLTVEEEKPSVGAGK 888

Query: 419  MIPVETSGGYLALERILLPEDAECCICLTTYEDGSELHALPCNHHFHAPCIVKWLKMNAT 598
            M+P+ETS GYLA ERILLPEDAECCICL  YEDG+ELH LPCNHHFH+ CIVKWLKMNAT
Sbjct: 889  MVPIETSSGYLANERILLPEDAECCICLCPYEDGAELHTLPCNHHFHSTCIVKWLKMNAT 948

Query: 599  CPLCKYNILKGSEQ 640
            CPLCKYNILKG+EQ
Sbjct: 949  CPLCKYNILKGNEQ 962


>ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
          Length = 2299

 Score =  270 bits (691), Expect = 4e-70
 Identities = 132/193 (68%), Positives = 142/193 (73%)
 Frame = +2

Query: 62   NRSSFVKRCESLNTMASFVWWIVGFYWVVSGGEALLQGAPRLYWLXXXXXXXXXXXXXXC 241
            N+SS  KRCES+NTMASF+WWIVGFYWVVSGGEALLQ APRLYWL              C
Sbjct: 2107 NQSSVTKRCESVNTMASFLWWIVGFYWVVSGGEALLQNAPRLYWLAVVFLAFDVFFAIFC 2166

Query: 242  VVXXXXXXXXXXXXXXXXXXXXYAVAGQEGASEADLSTLPKYRFEISQDEGKPSGGFGKM 421
            VV                    YAVAGQEGASEADLS LP+YRFE + +E K   G G M
Sbjct: 2167 VVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSMLPRYRFEANNEE-KSGVGAGTM 2225

Query: 422  IPVETSGGYLALERILLPEDAECCICLTTYEDGSELHALPCNHHFHAPCIVKWLKMNATC 601
            IP ETS GYLA ERILLPEDAECCICL++YEDG+ELHALPCNHHFH+ CI KWLKMNATC
Sbjct: 2226 IPTETSSGYLANERILLPEDAECCICLSSYEDGAELHALPCNHHFHSTCIAKWLKMNATC 2285

Query: 602  PLCKYNILKGSEQ 640
            PLCKYNILKGSEQ
Sbjct: 2286 PLCKYNILKGSEQ 2298


>ref|XP_003529221.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
          Length = 352

 Score =  270 bits (689), Expect = 6e-70
 Identities = 130/194 (67%), Positives = 138/194 (71%)
 Frame = +2

Query: 59  SNRSSFVKRCESLNTMASFVWWIVGFYWVVSGGEALLQGAPRLYWLXXXXXXXXXXXXXX 238
           S+  SF KRCE LNT  SF+WWIVGFYWVVSGG  LLQ APRLYWL              
Sbjct: 158 SSGYSFTKRCELLNTGVSFLWWIVGFYWVVSGGNILLQDAPRLYWLVVVFLAFDVFFAIF 217

Query: 239 CVVXXXXXXXXXXXXXXXXXXXXYAVAGQEGASEADLSTLPKYRFEISQDEGKPSGGFGK 418
           CVV                    YAVAGQEGASEADLS LPKYRF I  DE KPSGG G 
Sbjct: 218 CVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSMLPKYRFRILSDEDKPSGGAGS 277

Query: 419 MIPVETSGGYLALERILLPEDAECCICLTTYEDGSELHALPCNHHFHAPCIVKWLKMNAT 598
           M+P+ETS  YLA ER LLPEDAECCICL +YEDG+ELHALPCNHHFH+ CIVKWLKMNAT
Sbjct: 278 MVPIETSSAYLANERTLLPEDAECCICLCSYEDGAELHALPCNHHFHSSCIVKWLKMNAT 337

Query: 599 CPLCKYNILKGSEQ 640
           CPLCKYNILKG+EQ
Sbjct: 338 CPLCKYNILKGNEQ 351


>ref|XP_003518612.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
          Length = 357

 Score =  265 bits (677), Expect = 1e-68
 Identities = 127/194 (65%), Positives = 138/194 (71%)
 Frame = +2

Query: 59  SNRSSFVKRCESLNTMASFVWWIVGFYWVVSGGEALLQGAPRLYWLXXXXXXXXXXXXXX 238
           ++RS F KRCESLNT  SF+WWIVGFYWVVSGG+ LLQ APRLYWL              
Sbjct: 163 TSRSRFAKRCESLNTGVSFLWWIVGFYWVVSGGDILLQDAPRLYWLAVVFLAFDVFFAIF 222

Query: 239 CVVXXXXXXXXXXXXXXXXXXXXYAVAGQEGASEADLSTLPKYRFEISQDEGKPSGGFGK 418
           CVV                    YAVAGQEGASEADLS LPKY+F I  D  KPSGG G 
Sbjct: 223 CVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSMLPKYKFRILSDVDKPSGGAGS 282

Query: 419 MIPVETSGGYLALERILLPEDAECCICLTTYEDGSELHALPCNHHFHAPCIVKWLKMNAT 598
           M+P+ETS  YL  ER LL EDAECCICL +YEDG+ELHALPCNHHFH+ CIVKWLKMNAT
Sbjct: 283 MVPIETSSAYLENERTLLLEDAECCICLCSYEDGAELHALPCNHHFHSSCIVKWLKMNAT 342

Query: 599 CPLCKYNILKGSEQ 640
           CPLCKYNILKG+EQ
Sbjct: 343 CPLCKYNILKGNEQ 356


>ref|XP_002314782.1| predicted protein [Populus trichocarpa] gi|222863822|gb|EEF00953.1|
           predicted protein [Populus trichocarpa]
          Length = 295

 Score =  263 bits (672), Expect = 6e-68
 Identities = 125/194 (64%), Positives = 140/194 (72%), Gaps = 1/194 (0%)
 Frame = +2

Query: 56  VSNRSSFVKRCESLNTMASFVWWIVGFYWVVSGGEALLQGAPRLYWLXXXXXXXXXXXXX 235
           V +   F KRCES+NTM SF+WWIVGFYWVVSGG+ALLQ APRLYWL             
Sbjct: 102 VESEQHFTKRCESVNTMVSFLWWIVGFYWVVSGGDALLQNAPRLYWLAVVFLAFDVFFAI 161

Query: 236 XCVVXXXXXXXXXXXXXXXXXXXXYAVAGQEGASEADLSTLPKYRFEI-SQDEGKPSGGF 412
            CVV                    YAVAGQEGASEADLS LPKY++ +   +E +P  G 
Sbjct: 162 FCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYKYLVMGNEEKRPRVGA 221

Query: 413 GKMIPVETSGGYLALERILLPEDAECCICLTTYEDGSELHALPCNHHFHAPCIVKWLKMN 592
           GKM+PVETS GYL+ ER+LLPEDAECCICL+ YEDG+ELHALPCNHHFHA CIVKWLKMN
Sbjct: 222 GKMVPVETSSGYLSTERVLLPEDAECCICLSPYEDGAELHALPCNHHFHAMCIVKWLKMN 281

Query: 593 ATCPLCKYNILKGS 634
           ATCPLCKYNILKG+
Sbjct: 282 ATCPLCKYNILKGN 295


Top