BLASTX nr result

ID: Cephaelis21_contig00010520 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00010520
         (1155 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276984.1| PREDICTED: translation initiation factor IF-...   241   3e-61
ref|XP_002533227.1| translation initiation factor if-3, putative...   235   1e-59
ref|XP_004163986.1| PREDICTED: LOW QUALITY PROTEIN: translation ...   229   8e-58
ref|XP_004144726.1| PREDICTED: translation initiation factor IF-...   229   8e-58
ref|XP_002325123.1| predicted protein [Populus trichocarpa] gi|2...   227   4e-57

>ref|XP_002276984.1| PREDICTED: translation initiation factor IF-3 [Vitis vinifera]
            gi|297743667|emb|CBI36550.3| unnamed protein product
            [Vitis vinifera]
          Length = 272

 Score =  241 bits (614), Expect = 3e-61
 Identities = 141/264 (53%), Positives = 180/264 (68%), Gaps = 19/264 (7%)
 Frame = -3

Query: 1045 MAGFTTSTFPFKPFLYHPHKSLFP-----SSYFFGLHL---------RHSSTIHVPISL- 911
            MAG T S  PFKPF++    +  P      S  FG+ L           SS++H  ++  
Sbjct: 1    MAGLT-SGIPFKPFIFRTKTTSSPLYFSLDSQLFGVRLCSPTFSKCRSFSSSLHRSVTAR 59

Query: 910  --SFRTTSISARSXXXXXXXXGPFRKRPPEEDQVLDISSISSSDEVRLIDEQQNNVGIVK 737
               +R++  + RS           R+R  ++DQ LD+SSI S+  VRLIDEQQN VG+V 
Sbjct: 60   YGGYRSSGDAWRS-----------RQRDSDDDQALDVSSIRSAS-VRLIDEQQNMVGVVS 107

Query: 736  KSVALQMAEDAELDLVILAPDANPPVLRIMDXXXXXXXXXXXXXXXXXKAC--RMDLKEL 563
            KS A+QMAEDAELDLV+L+PDA+PPV+RIMD                 K+   RMDLKEL
Sbjct: 108  KSQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAANRMDLKEL 167

Query: 562  KMGYNIDVHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENQFRNNAIELIRRFQNDIGELA 383
            KMGYNID HDYSVRL+AA+KFL+DGDKVK+IVNLKGREN+FRN AIELIRRFQND+GELA
Sbjct: 168  KMGYNIDSHDYSVRLKAARKFLQDGDKVKIIVNLKGRENEFRNIAIELIRRFQNDVGELA 227

Query: 382  SEEARSFKDKNLFIILIPNKAILQ 311
            +EE+++F  +N+FI+L+PNKA+LQ
Sbjct: 228  TEESKNFSVRNIFIVLVPNKALLQ 251


>ref|XP_002533227.1| translation initiation factor if-3, putative [Ricinus communis]
            gi|223526947|gb|EEF29148.1| translation initiation factor
            if-3, putative [Ricinus communis]
          Length = 274

 Score =  235 bits (600), Expect = 1e-59
 Identities = 146/256 (57%), Positives = 169/256 (66%), Gaps = 11/256 (4%)
 Frame = -3

Query: 1045 MAGFTTSTFPFKPFLYHPHKSLFPSSYF--------FGLHLRHSSTIHVPISLSFRTTSI 890
            MAG TTS FPF P L     +   + +         FGL   H S     ISLS  +   
Sbjct: 1    MAGITTS-FPFNPLLTQLTTATKTTQFILSSLESKLFGLRF-HCSKPDSLISLSRASVVT 58

Query: 889  SAR-SXXXXXXXXGPFRKRPPEEDQVLDISSISSSDEVRLIDEQQNNVGIVKKSVALQMA 713
            SAR             R+   E+D  LDIS+I S+  VRLIDEQQN VG+V KS A+QMA
Sbjct: 59   SARFGGGFRSSGDRRSRQSDSEDDHALDISTIRSAT-VRLIDEQQNMVGVVPKSEAIQMA 117

Query: 712  EDAELDLVILAPDANPPVLRIMDXXXXXXXXXXXXXXXXXK--ACRMDLKELKMGYNIDV 539
            E+A LDLVIL+PDA+PPV+RIMD                 K  A RMDLKELKMGYNID 
Sbjct: 118  ENAALDLVILSPDADPPVVRIMDYNKYRYELQKKKKGQQKKSAATRMDLKELKMGYNIDQ 177

Query: 538  HDYSVRLRAAQKFLKDGDKVKVIVNLKGRENQFRNNAIELIRRFQNDIGELASEEARSFK 359
            HDY VRLRAA+KFLKDGDKVKVIVNLKGREN+FRN AIELIRRFQND+GELA+EE ++F+
Sbjct: 178  HDYDVRLRAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQNDVGELATEETKNFR 237

Query: 358  DKNLFIILIPNKAILQ 311
            D+N+FI L PNKAILQ
Sbjct: 238  DRNIFITLAPNKAILQ 253


>ref|XP_004163986.1| PREDICTED: LOW QUALITY PROTEIN: translation initiation factor
            IF-3-like [Cucumis sativus]
          Length = 299

 Score =  229 bits (585), Expect = 8e-58
 Identities = 137/246 (55%), Positives = 173/246 (70%), Gaps = 5/246 (2%)
 Frame = -3

Query: 1033 TTSTFPFKP-FLYHPHKSLFPSSYFFGLHLRHSSTI--HVPISLSFRTTSISARSXXXXX 863
            ++ST PF+  F   P  S   +++ F LH  +S  +    P+S   RT S+ AR      
Sbjct: 36   SSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLFSSPVSSPIRT-SVFARLGGAPR 94

Query: 862  XXXGPFRKRPPEEDQVLDISSISSSDEVRLIDEQQNNVGIVKKSVALQMAEDAELDLVIL 683
                P  KR  +E   LDIS+I S + VRLID +QN VG+V K+ A+QMAEDAELDLV++
Sbjct: 95   SSGPPDSKRSNDEIG-LDISAIKSIN-VRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVV 152

Query: 682  APDANPPVLRIMDXXXXXXXXXXXXXXXXXK--ACRMDLKELKMGYNIDVHDYSVRLRAA 509
            +PDA+PPV+RIMD                 K  A RMDLKELKMGYNID HDYSVRL+AA
Sbjct: 153  SPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAA 212

Query: 508  QKFLKDGDKVKVIVNLKGRENQFRNNAIELIRRFQNDIGELASEEARSFKDKNLFIILIP 329
            +KFLKDGDKVKVIVNLKGREN+FRN AIELIRRFQ ++GELA+EEA++F+D+N+FI+L+P
Sbjct: 213  KKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVP 272

Query: 328  NKAILQ 311
            NKA+LQ
Sbjct: 273  NKAVLQ 278


>ref|XP_004144726.1| PREDICTED: translation initiation factor IF-3-like [Cucumis sativus]
          Length = 299

 Score =  229 bits (585), Expect = 8e-58
 Identities = 137/246 (55%), Positives = 173/246 (70%), Gaps = 5/246 (2%)
 Frame = -3

Query: 1033 TTSTFPFKP-FLYHPHKSLFPSSYFFGLHLRHSSTI--HVPISLSFRTTSISARSXXXXX 863
            ++ST PF+  F   P  S   +++ F LH  +S  +    P+S   RT S+ AR      
Sbjct: 36   SSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLFSSPVSSPIRT-SVFARLGGAPR 94

Query: 862  XXXGPFRKRPPEEDQVLDISSISSSDEVRLIDEQQNNVGIVKKSVALQMAEDAELDLVIL 683
                P  KR  +E   LDIS+I S + VRLID +QN VG+V K+ A+QMAEDAELDLV++
Sbjct: 95   SSGPPDSKRSNDEIG-LDISAIKSIN-VRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVV 152

Query: 682  APDANPPVLRIMDXXXXXXXXXXXXXXXXXK--ACRMDLKELKMGYNIDVHDYSVRLRAA 509
            +PDA+PPV+RIMD                 K  A RMDLKELKMGYNID HDYSVRL+AA
Sbjct: 153  SPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAA 212

Query: 508  QKFLKDGDKVKVIVNLKGRENQFRNNAIELIRRFQNDIGELASEEARSFKDKNLFIILIP 329
            +KFLKDGDKVKVIVNLKGREN+FRN AIELIRRFQ ++GELA+EEA++F+D+N+FI+L+P
Sbjct: 213  KKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVP 272

Query: 328  NKAILQ 311
            NKA+LQ
Sbjct: 273  NKAVLQ 278


>ref|XP_002325123.1| predicted protein [Populus trichocarpa] gi|222866557|gb|EEF03688.1|
           predicted protein [Populus trichocarpa]
          Length = 278

 Score =  227 bits (579), Expect = 4e-57
 Identities = 131/224 (58%), Positives = 159/224 (70%), Gaps = 4/224 (1%)
 Frame = -3

Query: 970 SYFFGLHLRHSSTIHVPISLSFRTTS--ISARSXXXXXXXXGPFRKRPPEEDQVLDISSI 797
           S  FGL L H+  +  P SL   + S   +AR            RK   ++DQ L+ISSI
Sbjct: 36  SKLFGLRL-HNPNLSKPDSLPCSSPSPVTTARFGGPRSYDSRRPRKSDSDDDQALNISSI 94

Query: 796 SSSDEVRLIDEQQNNVGIVKKSVALQMAEDAELDLVILAPDANPPVLRIMDXXXXXXXXX 617
            S+  VRLID+QQN VG+V    A+QMAED EL+LVI++PDA+PPV+RIMD         
Sbjct: 95  RSAT-VRLIDQQQNMVGVVTVRDAIQMAEDTELNLVIVSPDADPPVVRIMDYNKFRYEQQ 153

Query: 616 XXXXXXXXK--ACRMDLKELKMGYNIDVHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENQ 443
                   K  A RMDLKELKMGYNID HDY VRLRAA+KFLKDGDKVKVIVNLKGREN+
Sbjct: 154 KKKRGQQKKSAASRMDLKELKMGYNIDQHDYDVRLRAARKFLKDGDKVKVIVNLKGRENE 213

Query: 442 FRNNAIELIRRFQNDIGELASEEARSFKDKNLFIILIPNKAILQ 311
           FRNNAIEL+RRFQND+GELA+EE+++F+D+N FI L+PNKA+LQ
Sbjct: 214 FRNNAIELLRRFQNDVGELATEESKNFRDRNAFITLVPNKALLQ 257


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