BLASTX nr result

ID: Cephaelis21_contig00009922 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00009922
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533956.1| conserved hypothetical protein [Ricinus comm...   105   5e-21
gb|AAK84472.1| unknown [Solanum lycopersicum]                         100   1e-19
ref|XP_002270761.2| PREDICTED: protein SKIP34 [Vitis vinifera]         96   4e-18
ref|NP_850928.1| protein SKIP34 [Arabidopsis thaliana] gi|751510...    91   1e-16
ref|XP_002864960.1| hypothetical protein ARALYDRAFT_496783 [Arab...    88   6e-16

>ref|XP_002533956.1| conserved hypothetical protein [Ricinus communis]
           gi|223526069|gb|EEF28425.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 100

 Score =  105 bits (261), Expect = 5e-21
 Identities = 53/72 (73%), Positives = 61/72 (84%)
 Frame = +2

Query: 65  NENQAVVDSLLHRLAETEAQLERAKPREAELSRQLEEMKRFVSVMEILETYLKRRYREQQ 244
           N N +VV+ L  RLAETEA+LERA+ REAELSR+LEEMKRFVSVMEILETYLKRRYREQQ
Sbjct: 28  NNNASVVEDLRDRLAETEARLERARAREAELSRRLEEMKRFVSVMEILETYLKRRYREQQ 87

Query: 245 DQLCRLYCQLPA 280
           + + R +  LPA
Sbjct: 88  EHVARFFSSLPA 99


>gb|AAK84472.1| unknown [Solanum lycopersicum]
          Length = 123

 Score =  100 bits (249), Expect = 1e-19
 Identities = 56/79 (70%), Positives = 61/79 (77%)
 Frame = +2

Query: 8   DLTTPARLTATTMAMTYPINENQAVVDSLLHRLAETEAQLERAKPREAELSRQLEEMKRF 187
           DLT P R T T  A     NEN  VV++L  RLAETEA+LERA+ REAELSRQLEEMKR+
Sbjct: 13  DLTDPTRRTRTLPAA----NENAVVVENLRDRLAETEARLERARAREAELSRQLEEMKRY 68

Query: 188 VSVMEILETYLKRRYREQQ 244
           V VMEILE YLKRRYREQQ
Sbjct: 69  VCVMEILECYLKRRYREQQ 87


>ref|XP_002270761.2| PREDICTED: protein SKIP34 [Vitis vinifera]
          Length = 97

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 49/71 (69%), Positives = 59/71 (83%)
 Frame = +2

Query: 65  NENQAVVDSLLHRLAETEAQLERAKPREAELSRQLEEMKRFVSVMEILETYLKRRYREQQ 244
           +EN  VV+ L  RLAET+A+LERA+ REAELSR+L+EMKRFVSVMEILETYLKRRY+EQQ
Sbjct: 24  DENAVVVEDLRSRLAETQARLERARAREAELSRRLQEMKRFVSVMEILETYLKRRYQEQQ 83

Query: 245 DQLCRLYCQLP 277
             + RL   +P
Sbjct: 84  QHVERLLSVIP 94


>ref|NP_850928.1| protein SKIP34 [Arabidopsis thaliana]
           gi|75151063|sp|Q8GWU7.1|SKI34_ARATH RecName:
           Full=Protein SKIP34; AltName: Full=SKP1-interacting
           partner 34 gi|26452272|dbj|BAC43223.1| unknown protein
           [Arabidopsis thaliana] gi|28416799|gb|AAO42930.1|
           At5g65493/At5g65490 [Arabidopsis thaliana]
           gi|332010680|gb|AED98063.1| protein SKIP34 [Arabidopsis
           thaliana]
          Length = 94

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 44/66 (66%), Positives = 58/66 (87%)
 Frame = +2

Query: 68  ENQAVVDSLLHRLAETEAQLERAKPREAELSRQLEEMKRFVSVMEILETYLKRRYREQQD 247
           E+ +VVD L  RLAETEA+L RA+ REAELSR+LE MKRFVSVMEI+ET+L+RR++EQ+D
Sbjct: 23  EDDSVVDDLRDRLAETEARLRRARAREAELSRRLEHMKRFVSVMEIIETFLERRFQEQKD 82

Query: 248 QLCRLY 265
           ++ RL+
Sbjct: 83  RIARLF 88


>ref|XP_002864960.1| hypothetical protein ARALYDRAFT_496783 [Arabidopsis lyrata subsp.
           lyrata] gi|297310795|gb|EFH41219.1| hypothetical protein
           ARALYDRAFT_496783 [Arabidopsis lyrata subsp. lyrata]
          Length = 95

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 42/67 (62%), Positives = 58/67 (86%)
 Frame = +2

Query: 65  NENQAVVDSLLHRLAETEAQLERAKPREAELSRQLEEMKRFVSVMEILETYLKRRYREQQ 244
           +++  VV+ L  RLAETEA+L RA+ REAELSR+LE MKRFVSVMEI+ET+L+RR++EQ+
Sbjct: 23  DDDSVVVEDLRDRLAETEARLRRARAREAELSRRLEHMKRFVSVMEIIETFLERRFQEQK 82

Query: 245 DQLCRLY 265
           D++ RL+
Sbjct: 83  DRIARLF 89


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