BLASTX nr result

ID: Cephaelis21_contig00009696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00009696
         (1082 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142081.1| PREDICTED: glycine-rich RNA-binding protein ...   145   2e-32
ref|XP_002274178.1| PREDICTED: glycine-rich RNA-binding protein ...   137   4e-30
ref|XP_003625508.1| RNA binding protein [Medicago truncatula] gi...   133   7e-29
ref|XP_003521342.1| PREDICTED: glycine-rich RNA-binding protein ...   133   9e-29
ref|NP_001237071.1| uncharacterized protein LOC100306326 [Glycin...   130   4e-28

>ref|XP_004142081.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Cucumis sativus]
          Length = 146

 Score =  145 bits (366), Expect = 2e-32
 Identities = 88/185 (47%), Positives = 107/185 (57%), Gaps = 2/185 (1%)
 Frame = -2

Query: 775 FPAFRRIL--SSSATTPTSDLRSRIGSSRLNSTLTSPNLFVSGLSRSTTDESLRNAFSKF 602
           F   RR+L  SSS+++ +S LRS+  + RL+STLTSP LF+SGLSR TTDE LR AFS F
Sbjct: 4   FSTVRRVLNGSSSSSSSSSILRSQWNAVRLSSTLTSPKLFISGLSRLTTDEKLREAFSSF 63

Query: 601 GKLVSGMHFSLLPFG*CNFGILYVN*KLSKFSAVPAYLYLVLFFAAQVIKDKDSGRSKGF 422
           G+LV                                         A+V+ D+ +GRSKGF
Sbjct: 64  GQLVD----------------------------------------AKVVTDRATGRSKGF 83

Query: 421 GFVTYVTLDEAQKAREEMSGKFLDGWVIFVDXXXXXXXXXXPQLQSNTQQSEYGYTVNKT 242
            FVTY T+DEA+KAREEM+ KFLDGWVIFVD          PQ QS T  SE+G   NKT
Sbjct: 84  AFVTYSTIDEAEKAREEMNAKFLDGWVIFVDPAKPREPRPPPQPQSET--SEFGIRTNKT 141

Query: 241 VGWCG 227
           +GWCG
Sbjct: 142 IGWCG 146


>ref|XP_002274178.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
           gi|297741476|emb|CBI32608.3| unnamed protein product
           [Vitis vinifera]
          Length = 140

 Score =  137 bits (346), Expect = 4e-30
 Identities = 85/186 (45%), Positives = 104/186 (55%), Gaps = 1/186 (0%)
 Frame = -2

Query: 781 MAFPA-FRRILSSSATTPTSDLRSRIGSSRLNSTLTSPNLFVSGLSRSTTDESLRNAFSK 605
           MAF + FRR+L+ S+T     L+S+   +R NST+TSP LFVSGLSR TTDE L+ AFS 
Sbjct: 1   MAFASSFRRVLTGSSTI----LQSQFSPARFNSTVTSPKLFVSGLSRLTTDEKLKEAFSP 56

Query: 604 FGKLVSGMHFSLLPFG*CNFGILYVN*KLSKFSAVPAYLYLVLFFAAQVIKDKDSGRSKG 425
           FG+L+                                         A+VI D+ SGRSKG
Sbjct: 57  FGQLLE----------------------------------------AKVITDRVSGRSKG 76

Query: 424 FGFVTYVTLDEAQKAREEMSGKFLDGWVIFVDXXXXXXXXXXPQLQSNTQQSEYGYTVNK 245
           FGFVTY TL+EA+KARE M+ KFLDGWVIFVD          P  Q   + SE G+  NK
Sbjct: 77  FGFVTYTTLEEAEKAREGMNAKFLDGWVIFVDPAKPREPRPPP--QQEPESSETGFRTNK 134

Query: 244 TVGWCG 227
           T+GWCG
Sbjct: 135 TIGWCG 140


>ref|XP_003625508.1| RNA binding protein [Medicago truncatula]
           gi|355500523|gb|AES81726.1| RNA binding protein
           [Medicago truncatula]
          Length = 141

 Score =  133 bits (335), Expect = 7e-29
 Identities = 84/183 (45%), Positives = 98/183 (53%)
 Frame = -2

Query: 775 FPAFRRILSSSATTPTSDLRSRIGSSRLNSTLTSPNLFVSGLSRSTTDESLRNAFSKFGK 596
           F  F R+L  S +   S   S   S RLNSTLTSP LF+SGLSR TTDE L  AFS FG+
Sbjct: 4   FFGFHRLLRHSQSPLVS---SHFTSIRLNSTLTSPKLFISGLSRLTTDEKLTEAFSPFGQ 60

Query: 595 LVSGMHFSLLPFG*CNFGILYVN*KLSKFSAVPAYLYLVLFFAAQVIKDKDSGRSKGFGF 416
           L+                                         A+VI D+ SGRSKGF F
Sbjct: 61  LLE----------------------------------------AKVITDRGSGRSKGFAF 80

Query: 415 VTYVTLDEAQKAREEMSGKFLDGWVIFVDXXXXXXXXXXPQLQSNTQQSEYGYTVNKTVG 236
           V+Y T++EA+KARE M+ KFLDGWVIFVD           Q QS  Q S+ G+TVNKTVG
Sbjct: 81  VSYSTIEEAEKAREGMNAKFLDGWVIFVDPAKPREPRPPQQSQS--QPSQTGFTVNKTVG 138

Query: 235 WCG 227
           WCG
Sbjct: 139 WCG 141


>ref|XP_003521342.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Glycine max]
          Length = 139

 Score =  133 bits (334), Expect = 9e-29
 Identities = 79/165 (47%), Positives = 92/165 (55%)
 Frame = -2

Query: 721 LRSRIGSSRLNSTLTSPNLFVSGLSRSTTDESLRNAFSKFGKLVSGMHFSLLPFG*CNFG 542
           + S   S RL+STLTSP LFVSGLSR T DE+L+ AFS FG+LV                
Sbjct: 17  VHSHYASIRLSSTLTSPKLFVSGLSRLTKDENLKEAFSSFGQLVE--------------- 61

Query: 541 ILYVN*KLSKFSAVPAYLYLVLFFAAQVIKDKDSGRSKGFGFVTYVTLDEAQKAREEMSG 362
                                    A+VI D+ SGRSKGF FVTY T++EA++ARE M+ 
Sbjct: 62  -------------------------AKVITDRASGRSKGFAFVTYTTIEEAERAREGMNA 96

Query: 361 KFLDGWVIFVDXXXXXXXXXXPQLQSNTQQSEYGYTVNKTVGWCG 227
           KFLDGWVIFVD           Q QS  Q SE G+TVNKTVGWCG
Sbjct: 97  KFLDGWVIFVDPAKPREPRPPQQSQS--QPSEIGFTVNKTVGWCG 139


>ref|NP_001237071.1| uncharacterized protein LOC100306326 [Glycine max]
           gi|255628209|gb|ACU14449.1| unknown [Glycine max]
          Length = 139

 Score =  130 bits (328), Expect = 4e-28
 Identities = 79/165 (47%), Positives = 90/165 (54%)
 Frame = -2

Query: 721 LRSRIGSSRLNSTLTSPNLFVSGLSRSTTDESLRNAFSKFGKLVSGMHFSLLPFG*CNFG 542
           + S   S RL+STLTSP LFVSGL R T DE L+ AFS FG+LV                
Sbjct: 17  VHSHYASIRLSSTLTSPKLFVSGLCRLTIDEKLKEAFSSFGQLVE--------------- 61

Query: 541 ILYVN*KLSKFSAVPAYLYLVLFFAAQVIKDKDSGRSKGFGFVTYVTLDEAQKAREEMSG 362
                                    A+VI D+ SGRSKGF FVTY T++EA+KARE M+ 
Sbjct: 62  -------------------------AKVIIDRASGRSKGFAFVTYTTIEEAEKAREGMNA 96

Query: 361 KFLDGWVIFVDXXXXXXXXXXPQLQSNTQQSEYGYTVNKTVGWCG 227
           KFLDGWVIFVD           Q QS  Q SE G+TVNKTVGWCG
Sbjct: 97  KFLDGWVIFVDPAKPREPRPPQQSQS--QPSETGFTVNKTVGWCG 139


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