BLASTX nr result
ID: Cephaelis21_contig00009678
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00009678
(2396 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002281582.2| PREDICTED: pentatricopeptide repeat-containi... 211 9e-52
emb|CAN61515.1| hypothetical protein VITISV_033964 [Vitis vinifera] 210 1e-51
ref|XP_003588542.1| Pentatricopeptide repeat-containing protein ... 203 2e-49
ref|XP_002309567.1| predicted protein [Populus trichocarpa] gi|2... 202 3e-49
ref|XP_003545589.1| PREDICTED: pentatricopeptide repeat-containi... 201 7e-49
>ref|XP_002281582.2| PREDICTED: pentatricopeptide repeat-containing protein At5g02860-like
[Vitis vinifera] gi|296081891|emb|CBI20896.3| unnamed
protein product [Vitis vinifera]
Length = 420
Score = 211 bits (536), Expect = 9e-52
Identities = 108/218 (49%), Positives = 157/218 (72%)
Frame = -2
Query: 2149 LITRLIRTPLHRIKETMDSEDKERSSPLRSPDFSLEALVAALRDSSFPKKANLVVEWKLD 1970
L+ +L++ + RIK +DSED + +S DFS + L+ L+ SS P KA+LV+EW+L+
Sbjct: 40 LLIKLLQESISRIKTVLDSED---NFTFKSSDFSWDILLTTLKSSS-PAKAHLVLEWRLE 95
Query: 1969 KFIKENEKNPDSYSRLILLSGKIQNFETALRIFSSMEAQGIRPTSSVFNALISACLSSNN 1790
K +++NE++ Y LI L K+QN A+R+F+SMEA GI+ TSSVFNALI CLSS N
Sbjct: 96 KMVRDNERDLVPYLELIFLCSKVQNVPFAMRVFNSMEAHGIKLTSSVFNALIYTCLSSGN 155
Query: 1789 FVTALSFYELMEISKEYECDSDTYNAFISAYANLGNKKAMWAWYSARIAAGFSPCLQTYE 1610
+TALS +E+M+ S+ + +S+TYN FIS Y+NLGN KAM AWY A+ AGFS L+TYE
Sbjct: 156 VMTALSLFEIMQSSENCKPNSETYNTFISVYSNLGNDKAMQAWYLAQKGAGFSADLRTYE 215
Query: 1609 AVILGCLKSKDFGDAERVFEEITSAGFVPNLSILQNML 1496
++I GC++S++F A+R +EE+ +G +PN IL+N+L
Sbjct: 216 SLISGCVRSRNFDCADRFYEEMMLSGIMPNGQILENIL 253
Score = 181 bits (459), Expect = 8e-43
Identities = 87/135 (64%), Positives = 108/135 (80%)
Frame = -1
Query: 1361 EKVVGLYYELGKVEEMEELLVAFTKSKQDSRILSFMHSMMIRLYVVADRLDDVEFSVGRM 1182
EK++GLY+E G VE+MEELL+ S Q +L +H +IR++ + DRLDD+E+SVGRM
Sbjct: 285 EKLMGLYFEHGTVEKMEELLLNLMNSNQSFAVLQQVHCGIIRMHAMLDRLDDMEYSVGRM 344
Query: 1181 LKQGISFRCPDDVEKIICLYFRHTAYERLDLFLECIKDSYKLRRSTYDILVAGYRRAGLQ 1002
LKQG+SFRCPDD+EK++C YFR AYERLDLFL IK SYKL +STYD+LVAGYRRAGL
Sbjct: 345 LKQGMSFRCPDDIEKVVCAYFRREAYERLDLFLGHIKGSYKLTKSTYDLLVAGYRRAGLS 404
Query: 1001 EKLDMVIDDMKRNGF 957
EKLD+V+D MK GF
Sbjct: 405 EKLDLVMDGMKLAGF 419
>emb|CAN61515.1| hypothetical protein VITISV_033964 [Vitis vinifera]
Length = 1331
Score = 210 bits (535), Expect = 1e-51
Identities = 112/244 (45%), Positives = 166/244 (68%), Gaps = 1/244 (0%)
Frame = -2
Query: 2224 ICSQIPLFIRVRSCNTIASSPNFTS-LITRLIRTPLHRIKETMDSEDKERSSPLRSPDFS 2048
+ +Q+ + I RS P ++ L+ +L++ + RIK +DSED + +S DFS
Sbjct: 925 LSAQLNIGIPQRSQRLFCDKPLVSNPLLIKLLQESISRIKTVLDSED---NFTFKSSDFS 981
Query: 2047 LEALVAALRDSSFPKKANLVVEWKLDKFIKENEKNPDSYSRLILLSGKIQNFETALRIFS 1868
+ L+ L+ SS P KA+LV+EW+L+K +++NE++ Y LI L K+QN A+R+F+
Sbjct: 982 WDILLTTLKSSS-PAKAHLVLEWRLEKMVRDNERDLVPYLELIFLCSKVQNVPFAMRVFN 1040
Query: 1867 SMEAQGIRPTSSVFNALISACLSSNNFVTALSFYELMEISKEYECDSDTYNAFISAYANL 1688
SMEA GI+ TSSVFNALI CLSS N +TALS +E+M+ S+ + +S+TYN FIS Y+NL
Sbjct: 1041 SMEAHGIKLTSSVFNALICTCLSSGNVMTALSLFEIMQSSENCKPNSETYNTFISVYSNL 1100
Query: 1687 GNKKAMWAWYSARIAAGFSPCLQTYEAVILGCLKSKDFGDAERVFEEITSAGFVPNLSIL 1508
GN KAM AWY A AGFS L+TYE++I GC +S++F A+R +EE+ +G +P+ IL
Sbjct: 1101 GNDKAMQAWYLAXKGAGFSADLRTYESLISGCXRSRNFDCADRFYEEMMLSGIMPBGQIL 1160
Query: 1507 QNML 1496
+N+L
Sbjct: 1161 ENIL 1164
Score = 181 bits (459), Expect = 8e-43
Identities = 87/135 (64%), Positives = 108/135 (80%)
Frame = -1
Query: 1361 EKVVGLYYELGKVEEMEELLVAFTKSKQDSRILSFMHSMMIRLYVVADRLDDVEFSVGRM 1182
EK++GLY+E G VE+MEELL+ S Q +L +H +IR++ + DRLDD+E+SVGRM
Sbjct: 1196 EKLMGLYFEHGTVEKMEELLLNLMNSNQSFAVLQQVHCGIIRMHAMLDRLDDMEYSVGRM 1255
Query: 1181 LKQGISFRCPDDVEKIICLYFRHTAYERLDLFLECIKDSYKLRRSTYDILVAGYRRAGLQ 1002
LKQG+SFRCPDD+EK++C YFR AYERLDLFL IK SYKL +STYD+LVAGYRRAGL
Sbjct: 1256 LKQGMSFRCPDDIEKVVCAYFRREAYERLDLFLGHIKGSYKLTKSTYDLLVAGYRRAGLS 1315
Query: 1001 EKLDMVIDDMKRNGF 957
EKLD+V+D MK GF
Sbjct: 1316 EKLDLVMDGMKLAGF 1330
>ref|XP_003588542.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477590|gb|AES58793.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 428
Score = 203 bits (517), Expect = 2e-49
Identities = 116/262 (44%), Positives = 167/262 (63%), Gaps = 2/262 (0%)
Frame = -2
Query: 2257 GMALKTMKRCLICSQIP--LFIRVRSCNTIASSPNFTSLITRLIRTPLHRIKETMDSEDK 2084
G+ + ++ R +IP F R S N S N L+ +L+ P IK T+D E
Sbjct: 4 GIRVLSIARKSYSGRIPHNFFFRNHSSN---SKSNSNPLLHKLLHLPNSHIKPTLDHEFP 60
Query: 2083 ERSSPLRSPDFSLEALVAALRDSSFPKKANLVVEWKLDKFIKENEKNPDSYSRLILLSGK 1904
+ L S DF L+ +L SS +K NLV+EW L+K +KEN K+ +S LI L GK
Sbjct: 61 SLPTSLLSFDF----LITSLSPSS--QKPNLVLEWILEKLLKENVKDHGRFSELIFLCGK 114
Query: 1903 IQNFETALRIFSSMEAQGIRPTSSVFNALISACLSSNNFVTALSFYELMEISKEYECDSD 1724
++N + + +F+SME G++PTS VFN+LISACLSS++ VTA S +E+ME S+ Y+ D
Sbjct: 115 LKNVQLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFH 174
Query: 1723 TYNAFISAYANLGNKKAMWAWYSARIAAGFSPCLQTYEAVILGCLKSKDFGDAERVFEEI 1544
TYN FISA++ GN AM AWYSA+ A G P LQT+E+VI GC+ SK++ A+RVFEE+
Sbjct: 175 TYNNFISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVISGCVNSKNYEIADRVFEEM 234
Query: 1543 TSAGFVPNLSILQNMLLVYTAQ 1478
+ +PN++IL++ML + +Q
Sbjct: 235 KISEMIPNVTILESMLKGFCSQ 256
Score = 157 bits (397), Expect = 1e-35
Identities = 77/132 (58%), Positives = 100/132 (75%)
Frame = -1
Query: 1355 VVGLYYELGKVEEMEELLVAFTKSKQDSRILSFMHSMMIRLYVVADRLDDVEFSVGRMLK 1176
+V LY+E G+VE+MEELL T DS +LS +H ++ +Y + DRLD+VE SVGRMLK
Sbjct: 284 LVVLYHEQGQVEKMEELLETITSYPIDSGVLSQIHCGIVTMYAMLDRLDEVELSVGRMLK 343
Query: 1175 QGISFRCPDDVEKIICLYFRHTAYERLDLFLECIKDSYKLRRSTYDILVAGYRRAGLQEK 996
QG+SF DDVEK+IC YFR AY+RLD+FLECIK+ Y RSTYD+L++GYRRA L EK
Sbjct: 344 QGMSFTSSDDVEKVICSYFRKEAYDRLDIFLECIKNCYVHTRSTYDLLISGYRRANLHEK 403
Query: 995 LDMVIDDMKRNG 960
+D+V+ DM+ G
Sbjct: 404 VDLVLADMESVG 415
>ref|XP_002309567.1| predicted protein [Populus trichocarpa] gi|222855543|gb|EEE93090.1|
predicted protein [Populus trichocarpa]
Length = 424
Score = 202 bits (514), Expect = 3e-49
Identities = 105/247 (42%), Positives = 172/247 (69%), Gaps = 6/247 (2%)
Frame = -2
Query: 2218 SQIPLFIRV------RSCNTIASSPNFTSLITRLIRTPLHRIKETMDSEDKERSSPLRSP 2057
S+IP I++ ++ ++ +++ + L+++L++TP +I T+DS+ S L+S
Sbjct: 16 SRIPQIIQLLFPIPFQAQHSFSTASSSDPLLSKLLQTPTSKIIITLDSD---HSFNLKSS 72
Query: 2056 DFSLEALVAALRDSSFPKKANLVVEWKLDKFIKENEKNPDSYSRLILLSGKIQNFETALR 1877
S + L+ LR SS P+KA+LV+EW+L + + +NE + D YS LI L GKIQN A+
Sbjct: 73 QLSWDPLITNLRSSS-PEKAHLVLEWRLGRMLDDNEIDHDEYSSLISLCGKIQNVSLAMH 131
Query: 1876 IFSSMEAQGIRPTSSVFNALISACLSSNNFVTALSFYELMEISKEYECDSDTYNAFISAY 1697
+F+SMEA+GI+PT+SVFN+L+ ACL S+N +TALS +E+ME S+ Y+ +S+TY+ F++ +
Sbjct: 132 VFASMEARGIKPTTSVFNSLLYACLLSSNVITALSLFEIMENSESYKPNSETYDKFVAGF 191
Query: 1696 ANLGNKKAMWAWYSARIAAGFSPCLQTYEAVILGCLKSKDFGDAERVFEEITSAGFVPNL 1517
+NL + M AW+ + AAGFS LQ YE +I GC+K++DF A+R++EE+ S G +P+L
Sbjct: 192 SNLRDVNKMQAWFVGKRAAGFSASLQNYECLISGCVKARDFDTADRLYEEMMSLGIMPSL 251
Query: 1516 SILQNML 1496
I++ +L
Sbjct: 252 HIMEWVL 258
Score = 159 bits (403), Expect = 2e-36
Identities = 82/134 (61%), Positives = 98/134 (73%)
Frame = -1
Query: 1361 EKVVGLYYELGKVEEMEELLVAFTKSKQDSRILSFMHSMMIRLYVVADRLDDVEFSVGRM 1182
E VV LY ELGKV+EME LL + Q L +H +IR Y + D+LDDVEFSVGRM
Sbjct: 290 ENVVRLYSELGKVDEMEMLLEMLMEFNQVGEALLQLHCGIIRFYAMLDKLDDVEFSVGRM 349
Query: 1181 LKQGISFRCPDDVEKIICLYFRHTAYERLDLFLECIKDSYKLRRSTYDILVAGYRRAGLQ 1002
+ QG+SF+ P DVEK+I YFR AYERLDLFLE IK YKL RSTYD+LVAGYRR GL
Sbjct: 350 MSQGMSFKSPSDVEKVISSYFRQEAYERLDLFLEHIKSYYKLTRSTYDLLVAGYRRVGLM 409
Query: 1001 EKLDMVIDDMKRNG 960
EKL+++++DMK G
Sbjct: 410 EKLNLLMEDMKLAG 423
>ref|XP_003545589.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 421
Score = 201 bits (511), Expect = 7e-49
Identities = 105/225 (46%), Positives = 150/225 (66%)
Frame = -2
Query: 2170 SSPNFTSLITRLIRTPLHRIKETMDSEDKERSSPLRSPDFSLEALVAALRDSSFPKKANL 1991
S N L+ +L++ P IK T+D E S RS DF + +L + D KA L
Sbjct: 34 SHSNSNPLLLKLLQVPNSHIKTTLDQEMASLQSSQRSWDFLITSLSPSSSD-----KARL 88
Query: 1990 VVEWKLDKFIKENEKNPDSYSRLILLSGKIQNFETALRIFSSMEAQGIRPTSSVFNALIS 1811
++EW L+K +KENEK+ D +S LI L GK+++ +R+FSSMEA G++P S VFN+LIS
Sbjct: 89 ILEWILEKMLKENEKDRDLFSELIFLCGKVKDVMLGMRVFSSMEATGVKPNSLVFNSLIS 148
Query: 1810 ACLSSNNFVTALSFYELMEISKEYECDSDTYNAFISAYANLGNKKAMWAWYSARIAAGFS 1631
CLSS++ VTA+S +E+ME S+ Y+ D TYN FISA++ GN AM AWYSA+ AA
Sbjct: 149 VCLSSHDIVTAVSLFEIMESSESYKPDFHTYNIFISAFSKSGNVDAMLAWYSAKKAARLG 208
Query: 1630 PCLQTYEAVILGCLKSKDFGDAERVFEEITSAGFVPNLSILQNML 1496
P LQ +E++I GC+ S+ F A+R+FEE+ +G VP+ SI+++ML
Sbjct: 209 PDLQMFESLISGCVNSRKFKIADRIFEEMMISGIVPSASIIESML 253
Score = 153 bits (387), Expect = 2e-34
Identities = 72/137 (52%), Positives = 102/137 (74%), Gaps = 1/137 (0%)
Frame = -1
Query: 1361 EKVVGLYYELGKVEEMEELLVAFTKS-KQDSRILSFMHSMMIRLYVVADRLDDVEFSVGR 1185
+K+V +Y +LGK EEME LL K + +L+ +H ++++Y + DRLDD+EF+VGR
Sbjct: 285 DKLVAMYLQLGKAEEMEGLLKTMMKPCVTTTGVLTRIHCGIVKMYAMVDRLDDIEFAVGR 344
Query: 1184 MLKQGISFRCPDDVEKIICLYFRHTAYERLDLFLECIKDSYKLRRSTYDILVAGYRRAGL 1005
MLKQG+SF DDVEK+IC YFR AY+RLD+FLEC+K Y L +STYD+L++GY+RA L
Sbjct: 345 MLKQGLSFTSADDVEKVICSYFRREAYDRLDIFLECLKRCYVLNKSTYDLLISGYKRARL 404
Query: 1004 QEKLDMVIDDMKRNGFI 954
EK++ V++DMK G +
Sbjct: 405 LEKVERVMEDMKSAGLV 421