BLASTX nr result

ID: Cephaelis21_contig00009422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00009422
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera]   142   3e-64
ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medica...   123   3e-26
ref|XP_002518274.1| conserved hypothetical protein [Ricinus comm...    90   3e-16
ref|XP_002517741.1| conserved hypothetical protein [Ricinus comm...    51   2e-10
ref|XP_002535828.1| conserved hypothetical protein [Ricinus comm...    54   8e-06

>emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera]
          Length = 280

 Score =  142 bits (357), Expect(2) = 3e-64
 Identities = 66/76 (86%), Positives = 69/76 (90%)
 Frame = +1

Query: 289 APLPAYPYKIFVGGSRSYKIPTTRSTLPKEKRRICQVRFLLVGLGGFDQKCYAYTQDYPS 468
           APLPAYPYK  VGGSRSY++PTTRSTLPK KR +CQVRF LVGLGGFDQKCYAYTQDYPS
Sbjct: 205 APLPAYPYKTRVGGSRSYEVPTTRSTLPKGKRCVCQVRFFLVGLGGFDQKCYAYTQDYPS 264

Query: 469 YRKLRGDSFTTTDDRP 516
            RKLRGD FTTTDDRP
Sbjct: 265 SRKLRGDYFTTTDDRP 280



 Score =  129 bits (324), Expect(2) = 3e-64
 Identities = 62/74 (83%), Positives = 67/74 (90%)
 Frame = +3

Query: 3   QLLIRSPHQELPGDDKGSNPPAVAGRLFSFTIRPGRLSLPSVAYEFTSIPSRVQFPFDFS 182
           QL++RSP QELPGDD+G+NPPAVAGRLF FTIRPGRLSLPSVAYEFTSIP RVQFPFDFS
Sbjct: 135 QLILRSPRQELPGDDRGTNPPAVAGRLFCFTIRPGRLSLPSVAYEFTSIPGRVQFPFDFS 194

Query: 183 LVAVTQIRASVSTP 224
           LVAVT+IRA    P
Sbjct: 195 LVAVTRIRARAPLP 208


>ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477316|gb|AES58519.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 556

 Score =  123 bits (308), Expect = 3e-26
 Identities = 60/68 (88%), Positives = 61/68 (89%)
 Frame = -2

Query: 337 TSNRLQRSCMDMQEGVLLGVCRSCVCSREWIPRQVCLGGVDTLARIWVTATREKSKGNCT 158
           TS RL  SCMDMQEGVLLGVCR CVCSREWIPRQV LGGVDTLARI VTATREKSKGNCT
Sbjct: 175 TSTRLLGSCMDMQEGVLLGVCRGCVCSREWIPRQVSLGGVDTLARIRVTATREKSKGNCT 234

Query: 157 RLGMDVNS 134
           + GMDVNS
Sbjct: 235 QPGMDVNS 242


>ref|XP_002518274.1| conserved hypothetical protein [Ricinus communis]
           gi|223542494|gb|EEF44034.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 431

 Score = 89.7 bits (221), Expect = 3e-16
 Identities = 45/65 (69%), Positives = 51/65 (78%)
 Frame = +3

Query: 33  LPGDDKGSNPPAVAGRLFSFTIRPGRLSLPSVAYEFTSIPSRVQFPFDFSLVAVTQIRAS 212
           +P   + + P    G LF FTIRPGRLSLPSVA +F S+PSRVQFPFDFSLVAVT+IR S
Sbjct: 65  VPRRRQKNQPVCCGGALFFFTIRPGRLSLPSVACKFMSVPSRVQFPFDFSLVAVTRIRTS 124

Query: 213 VSTPP 227
           VSTPP
Sbjct: 125 VSTPP 129



 Score = 57.4 bits (137), Expect(2) = 8e-09
 Identities = 31/55 (56%), Positives = 34/55 (61%)
 Frame = +1

Query: 145 PSLVGYSFLSIFPL*PLPKFAQVCPHPPNRLDEESILANKHNSYTHLGAPLPAYP 309
           PS V + F   F L  + +       PPN LDEESIL NKHN YTHL APLPAYP
Sbjct: 104 PSRVQFPF--DFSLVAVTRIRTSVSTPPNLLDEESILVNKHNPYTHLEAPLPAYP 156



 Score = 27.7 bits (60), Expect(2) = 8e-09
 Identities = 14/30 (46%), Positives = 14/30 (46%)
 Frame = +2

Query: 2   ATSHKVSSXXXXXXXXXXXXXCCGGAAFFF 91
           AT  KVSS             CCGGA FFF
Sbjct: 55  ATYPKVSSLRVPRRRQKNQPVCCGGALFFF 84


>ref|XP_002517741.1| conserved hypothetical protein [Ricinus communis]
           gi|223543139|gb|EEF44673.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 111

 Score = 51.2 bits (121), Expect(2) = 2e-10
 Identities = 24/28 (85%), Positives = 26/28 (92%)
 Frame = -2

Query: 226 GGVDTLARIWVTATREKSKGNCTRLGMD 143
           GG+DTLA+I VTATREKSKGNCTR GMD
Sbjct: 9   GGMDTLAQIRVTATREKSKGNCTRPGMD 36



 Score = 39.7 bits (91), Expect(2) = 2e-10
 Identities = 18/25 (72%), Positives = 20/25 (80%)
 Frame = -1

Query: 86  KKPPRHSRRVASFVVAGELLVRRPY 12
           K  P HSRRV S +VAG+LLVRRPY
Sbjct: 37  KIAPHHSRRVGSSIVAGQLLVRRPY 61


>ref|XP_002535828.1| conserved hypothetical protein [Ricinus communis]
           gi|255608154|ref|XP_002538850.1| conserved hypothetical
           protein [Ricinus communis] gi|223510119|gb|EEF23533.1|
           conserved hypothetical protein [Ricinus communis]
           gi|223521805|gb|EEF26555.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 86

 Score = 53.9 bits (128), Expect(2) = 8e-06
 Identities = 26/28 (92%), Positives = 26/28 (92%)
 Frame = -2

Query: 226 GGVDTLARIWVTATREKSKGNCTRLGMD 143
           GGVDTLARI VTATREKSKGNCTR GMD
Sbjct: 9   GGVDTLARIRVTATREKSKGNCTRPGMD 36



 Score = 21.2 bits (43), Expect(2) = 8e-06
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = -1

Query: 251 MDSSSSLFGG 222
           MDSSSS FGG
Sbjct: 1   MDSSSSKFGG 10


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