BLASTX nr result
ID: Cephaelis21_contig00009354
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00009354
(1265 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN81292.1| hypothetical protein VITISV_005315 [Vitis vinifera] 519 e-145
ref|XP_002519045.1| tfiih, polypeptide, putative [Ricinus commun... 516 e-144
ref|XP_004134713.1| PREDICTED: general transcription factor IIH ... 500 e-139
ref|NP_974564.1| transcription initiation factor TFIIH subunit H... 493 e-137
dbj|BAD43671.1| unnamed protein product [Arabidopsis thaliana] 493 e-137
>emb|CAN81292.1| hypothetical protein VITISV_005315 [Vitis vinifera]
Length = 451
Score = 519 bits (1336), Expect = e-145
Identities = 256/326 (78%), Positives = 291/326 (89%)
Frame = -2
Query: 1096 MPQVKIVAKNFMDMVASLPAMKLDKLFQNAFICEAILRSLPPLAKKYVLHLLYIDVSVPG 917
MPQVKI+AKNFMDMVASLPAMKLD L+ N FICEAILRSLPPLAKKY+L +LYIDV V
Sbjct: 1 MPQVKIIAKNFMDMVASLPAMKLDALYHNTFICEAILRSLPPLAKKYILQMLYIDVPVTA 60
Query: 916 KSLEDWVLADGLSKHKVAIDRLTQLRVLTETFDRKKEVSYRLNPTFQLNIRKHIRQGGVL 737
K++E+WVLADG SKH+VAIDRL QLRV TET DRKKE SYRLNPTFQ N++KH+ GGVL
Sbjct: 61 KAMEEWVLADGFSKHRVAIDRLIQLRVFTETSDRKKETSYRLNPTFQTNLQKHLIYGGVL 120
Query: 736 PREPLPSNVALRLPSSEELDAYAANQWECFLLHLISSSEAEKTTNISSSMMKVFQRGLLS 557
PREP+PSN+ +RLPS ++L+AYA QWECFLL LISS++ EK TN SSS+MKVFQRGLL+
Sbjct: 121 PREPMPSNITVRLPSLDDLEAYALGQWECFLLQLISSTQTEKLTNFSSSLMKVFQRGLLT 180
Query: 556 QKDEKEPPRLTEGGFQFLLMDTNAQLWYIIREYICNSEERGLDSADLISFLLELSFHATG 377
Q+ EKE PRLTE GFQFLLMDTNAQLWYI+REYI NSEERG+D ADLISFLLELSFH TG
Sbjct: 181 QR-EKEAPRLTESGFQFLLMDTNAQLWYIMREYISNSEERGVDPADLISFLLELSFHVTG 239
Query: 376 EAYSMSTLSDIQPTIIRDLADLGLVKLQKGIKESWFIPTKLATNLSISLSDTSSRKQGFV 197
EAY+++TL++ Q I+DL DLGLVKLQ+G KESWFIPTKLATNLS+SLSDTSSRKQGFV
Sbjct: 240 EAYNINTLTEFQRNTIKDLVDLGLVKLQQGRKESWFIPTKLATNLSMSLSDTSSRKQGFV 299
Query: 196 VVETNFRMYAYSTSKLHCEILRLFAR 119
VVETNFR+YAYS+SKLHCEILRLF+R
Sbjct: 300 VVETNFRLYAYSSSKLHCEILRLFSR 325
>ref|XP_002519045.1| tfiih, polypeptide, putative [Ricinus communis]
gi|223541708|gb|EEF43256.1| tfiih, polypeptide, putative
[Ricinus communis]
Length = 451
Score = 516 bits (1328), Expect = e-144
Identities = 255/326 (78%), Positives = 291/326 (89%)
Frame = -2
Query: 1096 MPQVKIVAKNFMDMVASLPAMKLDKLFQNAFICEAILRSLPPLAKKYVLHLLYIDVSVPG 917
MPQV+I+AKNFMDMVASLPAMKLDKL+ N FIC+AILRSLPPLAKKYV+ +LYID V
Sbjct: 1 MPQVRIIAKNFMDMVASLPAMKLDKLYTNPFICQAILRSLPPLAKKYVVQILYIDGPVAD 60
Query: 916 KSLEDWVLADGLSKHKVAIDRLTQLRVLTETFDRKKEVSYRLNPTFQLNIRKHIRQGGVL 737
K+LE+W+L DG SKH+VAIDRLTQLR+ TE DRKKE+SY+LNPTFQ N++KH+ GGVL
Sbjct: 61 KTLEEWLLPDGSSKHRVAIDRLTQLRIFTEIVDRKKEISYKLNPTFQTNLQKHLIDGGVL 120
Query: 736 PREPLPSNVALRLPSSEELDAYAANQWECFLLHLISSSEAEKTTNISSSMMKVFQRGLLS 557
P EPL SN+A+RLP+ EELD YA QWECFLLHLI+S AE++TN SSSMMK+FQRGLL+
Sbjct: 121 PGEPLASNIAVRLPTLEELDTYALGQWECFLLHLINSGHAERSTNFSSSMMKIFQRGLLT 180
Query: 556 QKDEKEPPRLTEGGFQFLLMDTNAQLWYIIREYICNSEERGLDSADLISFLLELSFHATG 377
Q+D KE PRLTE GFQFLLMDTNAQLWYIIREYI NSEERGLDSADLISFLLELSFH TG
Sbjct: 181 QRD-KEAPRLTESGFQFLLMDTNAQLWYIIREYISNSEERGLDSADLISFLLELSFHITG 239
Query: 376 EAYSMSTLSDIQPTIIRDLADLGLVKLQKGIKESWFIPTKLATNLSISLSDTSSRKQGFV 197
EAY+M L++ Q +I+DLADLGLVKLQ+G KESWFIPTKLATNLS+SL+D+SSRKQGFV
Sbjct: 240 EAYNMIMLTEFQRNMIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLTDSSSRKQGFV 299
Query: 196 VVETNFRMYAYSTSKLHCEILRLFAR 119
VVETNFRMYAYSTSKLHCEI+RLF+R
Sbjct: 300 VVETNFRMYAYSTSKLHCEIMRLFSR 325
>ref|XP_004134713.1| PREDICTED: general transcription factor IIH subunit 4-like [Cucumis
sativus]
Length = 451
Score = 500 bits (1288), Expect = e-139
Identities = 251/326 (76%), Positives = 289/326 (88%)
Frame = -2
Query: 1096 MPQVKIVAKNFMDMVASLPAMKLDKLFQNAFICEAILRSLPPLAKKYVLHLLYIDVSVPG 917
MPQVKI+AKNFMDMVASLPAMKLD+L++NAFICEAILRSLPPLAKK+VL +LYID V
Sbjct: 1 MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGPVSA 60
Query: 916 KSLEDWVLADGLSKHKVAIDRLTQLRVLTETFDRKKEVSYRLNPTFQLNIRKHIRQGGVL 737
KS+E+WVL DG+SK+KVA+DRL QLRV ET DRK+E +YRLNPTFQ N++K + G VL
Sbjct: 61 KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIHGEVL 120
Query: 736 PREPLPSNVALRLPSSEELDAYAANQWECFLLHLISSSEAEKTTNISSSMMKVFQRGLLS 557
REP+PSN+ +RLPS E+L+AYA +QWECFLL LI+S +AEK +NISSS+MKVFQ+GLLS
Sbjct: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLS 180
Query: 556 QKDEKEPPRLTEGGFQFLLMDTNAQLWYIIREYICNSEERGLDSADLISFLLELSFHATG 377
Q+D KE PRLTE GFQFLLM+TNAQLWYIIREYI N+EERG+D ADLISFLLELSFH TG
Sbjct: 181 QRD-KEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTG 239
Query: 376 EAYSMSTLSDIQPTIIRDLADLGLVKLQKGIKESWFIPTKLATNLSISLSDTSSRKQGFV 197
EAY + TLSD Q I+DLADLGLVKLQ+G KESWFIPTKLATNLS+SL+D+SSRK GFV
Sbjct: 240 EAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFV 299
Query: 196 VVETNFRMYAYSTSKLHCEILRLFAR 119
VVETNFRMYAYSTSKLHCEILRLF+R
Sbjct: 300 VVETNFRMYAYSTSKLHCEILRLFSR 325
>ref|NP_974564.1| transcription initiation factor TFIIH subunit H4 [Arabidopsis
thaliana] gi|332658438|gb|AEE83838.1| transcription
initiation factor TFIIH subunit H4 [Arabidopsis thaliana]
Length = 462
Score = 493 bits (1270), Expect = e-137
Identities = 243/326 (74%), Positives = 285/326 (87%)
Frame = -2
Query: 1096 MPQVKIVAKNFMDMVASLPAMKLDKLFQNAFICEAILRSLPPLAKKYVLHLLYIDVSVPG 917
MPQVKI+AKNFMDMVASLPA+KLDKL+ N FICEAILRSLPPLAKKYVL +LYIDV VP
Sbjct: 1 MPQVKIIAKNFMDMVASLPAIKLDKLYNNVFICEAILRSLPPLAKKYVLQMLYIDVPVPA 60
Query: 916 KSLEDWVLADGLSKHKVAIDRLTQLRVLTETFDRKKEVSYRLNPTFQLNIRKHIRQGGVL 737
+E+WVLADG SKH+VAIDRL QLR+ +E DRK+ SY LNPTFQ N++KHI GGVL
Sbjct: 61 TMMEEWVLADGTSKHRVAIDRLIQLRIFSEISDRKRGTSYSLNPTFQNNLQKHIISGGVL 120
Query: 736 PREPLPSNVALRLPSSEELDAYAANQWECFLLHLISSSEAEKTTNISSSMMKVFQRGLLS 557
PREP+ S+ A++LPS +EL+ YA QWECFLL LI+S + EK T ISSSMMK+FQRGLLS
Sbjct: 121 PREPMNSDNAIKLPSLQELETYALKQWECFLLQLINSGQGEKLTGISSSMMKIFQRGLLS 180
Query: 556 QKDEKEPPRLTEGGFQFLLMDTNAQLWYIIREYICNSEERGLDSADLISFLLELSFHATG 377
Q+D K+ PRLTE GFQFLLMDTNAQLWYIIREYI N+EER +D ADLISFLLELSFH TG
Sbjct: 181 QRD-KDGPRLTESGFQFLLMDTNAQLWYIIREYILNAEERDVDPADLISFLLELSFHVTG 239
Query: 376 EAYSMSTLSDIQPTIIRDLADLGLVKLQKGIKESWFIPTKLATNLSISLSDTSSRKQGFV 197
+AY+++TL+++Q ++DLADLGLVKLQ+G K+SWFIPTKLATNLS+SL+D+S+RK+GFV
Sbjct: 240 QAYNLNTLTEVQNNTLKDLADLGLVKLQQGRKDSWFIPTKLATNLSVSLADSSARKEGFV 299
Query: 196 VVETNFRMYAYSTSKLHCEILRLFAR 119
V+ETNFRMYAYSTSKL CEILRLFAR
Sbjct: 300 VMETNFRMYAYSTSKLQCEILRLFAR 325
>dbj|BAD43671.1| unnamed protein product [Arabidopsis thaliana]
Length = 452
Score = 493 bits (1270), Expect = e-137
Identities = 243/326 (74%), Positives = 285/326 (87%)
Frame = -2
Query: 1096 MPQVKIVAKNFMDMVASLPAMKLDKLFQNAFICEAILRSLPPLAKKYVLHLLYIDVSVPG 917
MPQVKI+AKNFMDMVASLPA+KLDKL+ N FICEAILRSLPPLAKKYVL +LYIDV VP
Sbjct: 1 MPQVKIIAKNFMDMVASLPAIKLDKLYNNVFICEAILRSLPPLAKKYVLQMLYIDVPVPA 60
Query: 916 KSLEDWVLADGLSKHKVAIDRLTQLRVLTETFDRKKEVSYRLNPTFQLNIRKHIRQGGVL 737
+E+WVLADG SKH+VAIDRL QLR+ +E DRK+ SY LNPTFQ N++KHI GGVL
Sbjct: 61 TMMEEWVLADGTSKHRVAIDRLIQLRIFSEISDRKRGTSYSLNPTFQNNLQKHIISGGVL 120
Query: 736 PREPLPSNVALRLPSSEELDAYAANQWECFLLHLISSSEAEKTTNISSSMMKVFQRGLLS 557
PREP+ S+ A++LPS +EL+ YA QWECFLL LI+S + EK T ISSSMMK+FQRGLLS
Sbjct: 121 PREPMNSDNAIKLPSLQELETYALKQWECFLLQLINSGQGEKLTGISSSMMKIFQRGLLS 180
Query: 556 QKDEKEPPRLTEGGFQFLLMDTNAQLWYIIREYICNSEERGLDSADLISFLLELSFHATG 377
Q+D K+ PRLTE GFQFLLMDTNAQLWYIIREYI N+EER +D ADLISFLLELSFH TG
Sbjct: 181 QRD-KDGPRLTESGFQFLLMDTNAQLWYIIREYILNAEERDVDPADLISFLLELSFHVTG 239
Query: 376 EAYSMSTLSDIQPTIIRDLADLGLVKLQKGIKESWFIPTKLATNLSISLSDTSSRKQGFV 197
+AY+++TL+++Q ++DLADLGLVKLQ+G K+SWFIPTKLATNLS+SL+D+S+RK+GFV
Sbjct: 240 QAYNLNTLTEVQNNTLKDLADLGLVKLQQGRKDSWFIPTKLATNLSVSLADSSARKEGFV 299
Query: 196 VVETNFRMYAYSTSKLHCEILRLFAR 119
V+ETNFRMYAYSTSKL CEILRLFAR
Sbjct: 300 VMETNFRMYAYSTSKLQCEILRLFAR 325