BLASTX nr result

ID: Cephaelis21_contig00009290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00009290
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28010.3| unnamed protein product [Vitis vinifera]               67   2e-09
emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera]    67   2e-09
ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme...    60   1e-07
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme...    59   3e-07
ref|XP_003517644.1| PREDICTED: probable RNA-dependent RNA polyme...    55   4e-06

>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
          Length = 929

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 37/70 (52%), Positives = 44/70 (62%), Gaps = 12/70 (17%)
 Frame = -1

Query: 310 DGSYKLKGPCLNSTITHLQRKLGDNNVLIVKFVEE--DRAYIEW----------ICREGI 167
           DGSY+ KGP LN T THLQR LGD N+L+VKF E+  DR+ +            I REGI
Sbjct: 184 DGSYRFKGPYLNKTRTHLQRVLGDENILLVKFAEDVTDRSSLNCSTDSNASYNKIAREGI 243

Query: 166 IVGSWRYRFF 137
            VG  +YRFF
Sbjct: 244 FVGLRQYRFF 253


>emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera]
          Length = 1202

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 37/70 (52%), Positives = 44/70 (62%), Gaps = 12/70 (17%)
 Frame = -1

Query: 310 DGSYKLKGPCLNSTITHLQRKLGDNNVLIVKFVEE--DRAYIEW----------ICREGI 167
           DGSY+ KGP LN T THLQR LGD N+L+VKF E+  DR+ +            I REGI
Sbjct: 547 DGSYRFKGPYLNKTRTHLQRVLGDENILLVKFAEDVTDRSSLNCSTDSNASYNKIAREGI 606

Query: 166 IVGSWRYRFF 137
            VG  +YRFF
Sbjct: 607 FVGLRQYRFF 616


>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
           sativus]
          Length = 1056

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 35/71 (49%), Positives = 44/71 (61%), Gaps = 13/71 (18%)
 Frame = -1

Query: 310 DGSYKLKGPCLNSTITHLQRKLGDNNVLIVKFVEEDR-------------AYIEWICREG 170
           DGS + KGP LN+T THLQR LGD+NVL+VKF E+               AY + I R+G
Sbjct: 274 DGSCRFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDKSDTPLSNHSGGSFYAYSK-IARDG 332

Query: 169 IIVGSWRYRFF 137
           I++G  RY FF
Sbjct: 333 ILLGLRRYHFF 343


>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
           vinifera]
          Length = 943

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 37/78 (47%), Positives = 44/78 (56%), Gaps = 20/78 (25%)
 Frame = -1

Query: 310 DGSYKLK--------GPCLNSTITHLQRKLGDNNVLIVKFVEE--DRAYIEW-------- 185
           DGSY+ K        GP LN T THLQR LGD N+L+VKF E+  DR+ +          
Sbjct: 184 DGSYRFKVCISSSLNGPYLNKTRTHLQRVLGDENILLVKFAEDVTDRSSLNCSTDSNASY 243

Query: 184 --ICREGIIVGSWRYRFF 137
             I REGI VG  +YRFF
Sbjct: 244 NKIAREGIFVGLRQYRFF 261


>ref|XP_003517644.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Glycine
           max]
          Length = 953

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 33/70 (47%), Positives = 39/70 (55%), Gaps = 12/70 (17%)
 Frame = -1

Query: 310 DGSYKLKGPCLNSTITHLQRKLGDNNVLIVKF------------VEEDRAYIEWICREGI 167
           DG+ + KGP L ST THLQ+ LGD+NVL+VKF             EE  A      +EGI
Sbjct: 171 DGNLRFKGPILQSTRTHLQKTLGDDNVLLVKFAEDGSGKNFRTHAEEANALYGKFGKEGI 230

Query: 166 IVGSWRYRFF 137
            VG   YRFF
Sbjct: 231 RVGLRLYRFF 240


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