BLASTX nr result

ID: Cephaelis21_contig00009255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00009255
         (673 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270244.2| PREDICTED: RNA-binding protein 40-like [Viti...   224   9e-57
ref|XP_003632078.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding ...   215   5e-54
ref|XP_002525464.1| RNA binding protein, putative [Ricinus commu...   213   4e-53
ref|XP_002325403.1| predicted protein [Populus trichocarpa] gi|2...   212   6e-53
ref|XP_003553326.1| PREDICTED: RNA-binding protein 40-like [Glyc...   209   3e-52

>ref|XP_002270244.2| PREDICTED: RNA-binding protein 40-like [Vitis vinifera]
           gi|298205172|emb|CBI17231.3| unnamed protein product
           [Vitis vinifera]
          Length = 463

 Score =  224 bits (572), Expect = 9e-57
 Identities = 122/176 (69%), Positives = 139/176 (78%), Gaps = 3/176 (1%)
 Frame = +3

Query: 153 ENENATLLIRHLPEAITQETLSRLFSHYGATSVRLGSHGRMRNCAFVDFKNIALASQAQQ 332
           E   ATLLIRHLPEAI Q+TLSRLFS YGA+SVR  + GR+RNCAFVDFK+  LASQA +
Sbjct: 17  EKSAATLLIRHLPEAIPQDTLSRLFSSYGASSVRPCTSGRLRNCAFVDFKSEMLASQALR 76

Query: 333 QLHGLRFIGKILSVERASGQITGDKSQESENQIRNDLG---SMMKDASMARDQREGSKSG 503
           QL+GLRF+GK+L VERA+ + T D  Q+SE     DL    S++KD +MARD  EG KS 
Sbjct: 77  QLNGLRFLGKVLLVERAN-KPTEDDKQKSEALFGKDLTKPVSLIKDFTMARDLDEGLKSS 135

Query: 504 SSFISEPIAERLGVDYPFPSYLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMN 671
           S   SEPIA RLG+DYPFP +LEYAYPPPDGNILTNIVNALIAVPRFY QVLHLMN
Sbjct: 136 SLPASEPIAARLGIDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYVQVLHLMN 191


>ref|XP_003632078.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 40-like [Vitis
           vinifera]
          Length = 463

 Score =  215 bits (548), Expect = 5e-54
 Identities = 118/176 (67%), Positives = 135/176 (76%), Gaps = 3/176 (1%)
 Frame = +3

Query: 153 ENENATLLIRHLPEAITQETLSRLFSHYGATSVRLGSHGRMRNCAFVDFKNIALASQAQQ 332
           E   ATLLIRHLPEAI Q+TLSRLFS YGA+SVR  + GR+RNCAFVDFK+  LASQA +
Sbjct: 17  EKSAATLLIRHLPEAIPQDTLSRLFSSYGASSVRPSTSGRLRNCAFVDFKSEMLASQALR 76

Query: 333 QLHGLRFIGKILSVERASGQITGDKSQESENQIRNDL---GSMMKDASMARDQREGSKSG 503
           QL+GLRF+GK+L VERA+ + T D  Q+SE     DL    S++KD +MARD  EG KS 
Sbjct: 77  QLNGLRFLGKVLLVERAN-KPTEDDKQKSEALFGKDLTKPASLIKDFTMARDLGEGLKSS 135

Query: 504 SSFISEPIAERLGVDYPFPSYLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMN 671
           S   SEPIA RLG+DYPFP +LEY    PDGNILTNIVNALIAVPRFY QVLHLMN
Sbjct: 136 SLPASEPIAARLGIDYPFPPHLEYVXSHPDGNILTNIVNALIAVPRFYVQVLHLMN 191


>ref|XP_002525464.1| RNA binding protein, putative [Ricinus communis]
           gi|223535277|gb|EEF36954.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 450

 Score =  213 bits (541), Expect = 4e-53
 Identities = 118/174 (67%), Positives = 134/174 (77%), Gaps = 5/174 (2%)
 Frame = +3

Query: 165 ATLLIRHLPEAITQETLSRLFSHYGATSVRLGSHGRMRNCAFVDFKNIALASQAQQQLHG 344
           +TLLIRHLPEAI  ETLSRLFSHYGATSVR  + GR+ NCAFVDFKN ALA QAQ+QL+G
Sbjct: 9   STLLIRHLPEAIPHETLSRLFSHYGATSVRPCAGGRLTNCAFVDFKNEALAYQAQRQLNG 68

Query: 345 LRFIGKILSVERASGQITGDKS--QESENQIRND---LGSMMKDASMARDQREGSKSGSS 509
           LRF+GK+L+ E+A+     + +   +SE QIR D     S+ KDAS   D    SKS  +
Sbjct: 69  LRFLGKVLAAEKANNNKPNENNVLTQSEAQIRKDHTLPTSVDKDASAMIDTDGRSKSVPA 128

Query: 510 FISEPIAERLGVDYPFPSYLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMN 671
             SEPIA RLGVDYPFP +LEY YPPPDGNILTNIVNALIAVPRFYTQVLHLMN
Sbjct: 129 --SEPIAPRLGVDYPFPPHLEYTYPPPDGNILTNIVNALIAVPRFYTQVLHLMN 180


>ref|XP_002325403.1| predicted protein [Populus trichocarpa] gi|222862278|gb|EEE99784.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score =  212 bits (539), Expect = 6e-53
 Identities = 113/168 (67%), Positives = 131/168 (77%)
 Frame = +3

Query: 168 TLLIRHLPEAITQETLSRLFSHYGATSVRLGSHGRMRNCAFVDFKNIALASQAQQQLHGL 347
           TLLI+HLPEAI  +TLSRLFSHYGA SVR  + GR++NCAFVDFK+ +LA QA  QL+GL
Sbjct: 37  TLLIKHLPEAIPFKTLSRLFSHYGAVSVRPCNSGRLKNCAFVDFKSESLAYQAHTQLNGL 96

Query: 348 RFIGKILSVERASGQITGDKSQESENQIRNDLGSMMKDASMARDQREGSKSGSSFISEPI 527
            F+GK+LSVERAS      + +ES         S+++DAS+ RD  +GSK  S   SEPI
Sbjct: 97  SFLGKVLSVERASKLSEAQQGKESVPPT-----SLIEDASVPRDVGDGSKFRSFPASEPI 151

Query: 528 AERLGVDYPFPSYLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMN 671
           A RLGVDYPFP +LEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMN
Sbjct: 152 APRLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMN 199


>ref|XP_003553326.1| PREDICTED: RNA-binding protein 40-like [Glycine max]
          Length = 452

 Score =  209 bits (533), Expect = 3e-52
 Identities = 106/169 (62%), Positives = 132/169 (78%)
 Frame = +3

Query: 165 ATLLIRHLPEAITQETLSRLFSHYGATSVRLGSHGRMRNCAFVDFKNIALASQAQQQLHG 344
           ATLLI+HLPEAI   TLSR+ +++GA+SVR  S GR+RNCAF DFKN  +ASQAQ+QL+G
Sbjct: 34  ATLLIKHLPEAIPDVTLSRILANFGASSVRPCSTGRLRNCAFADFKNEIVASQAQRQLNG 93

Query: 345 LRFIGKILSVERASGQITGDKSQESENQIRNDLGSMMKDASMARDQREGSKSGSSFISEP 524
           LRF+GK+LS ERAS      +    +   ++   SM+K+A++ +     +KSG+  I EP
Sbjct: 94  LRFLGKVLSAERASNPTENGEKSSGDQLGKDSKTSMLKNANVTKPIDGDTKSGALPIPEP 153

Query: 525 IAERLGVDYPFPSYLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMN 671
           IA+RLGV+YPFP +LEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMN
Sbjct: 154 IADRLGVNYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMN 202


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