BLASTX nr result

ID: Cephaelis21_contig00009095 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00009095
         (1586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ07996.1| hypothetical protein OsI_30258 [Oryza sativa Indi...   123   2e-25
gb|EEE69144.1| hypothetical protein OsJ_28268 [Oryza sativa Japo...   122   2e-25
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...   121   6e-25
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    97   6e-25
emb|CAN59718.1| hypothetical protein VITISV_032347 [Vitis vinifera]    92   2e-24

>gb|EAZ07996.1| hypothetical protein OsI_30258 [Oryza sativa Indica Group]
          Length = 633

 Score =  123 bits (308), Expect = 2e-25
 Identities = 70/198 (35%), Positives = 106/198 (53%)
 Frame = -3

Query: 594 LSLNKAQAELLGALTNEEDFWE*KT*VKWLQDGDQNTKFFHASVVSRRVKLRITKLLDAA 415
           + + +   ++   L  EE  W  ++ + WL++GD+NT+FFH+  V R  K +ITKL D+ 
Sbjct: 395 MEIRRVSDQMNELLYREEMIWLQRSRIAWLKEGDRNTRFFHSKAVWRAKKNKITKLRDSD 454

Query: 414 GAWVDGADFLK*QACNFFQDHLTEKKAIFDVTQAATLLEHIP*LVTSKNNHTLLAPVTLE 235
           G        L+  A  +FQ   T   +I D ++  +L++     VT   N  L   V+ E
Sbjct: 455 GTVHSTTKELESMATEYFQRLFTADPSI-DHSRVTSLIKP---KVTDAMNEELCKTVSEE 510

Query: 234 KVRTVVFHLNPSSAAGSDGFHGHFYQHCWDVIDDDLFHAVQEFFAEVPLP*SIGSTWNVL 55
           ++   +F + P  A G DGF G FYQ  W ++ DD+  AVQEFF+   +P  +  T  VL
Sbjct: 511 EIANALFQIGPLKAPGPDGFPGRFYQRNWAILKDDIVRAVQEFFSSGTMPSGVNETAIVL 570

Query: 54  LPKKDNPTGFGDFRPISL 1
           +PK + P    DFRPISL
Sbjct: 571 IPKTEQPQELKDFRPISL 588


>gb|EEE69144.1| hypothetical protein OsJ_28268 [Oryza sativa Japonica Group]
          Length = 1256

 Score =  122 bits (307), Expect = 2e-25
 Identities = 70/185 (37%), Positives = 102/185 (55%)
 Frame = -3

Query: 555 LTNEEDFWE*KT*VKWLQDGDQNTKFFHASVVSRRVKLRITKLLDAAGAWVDGADFLK*Q 376
           L  EE  W  ++ + WL++GD+NT+FFH+  V R  K +ITKL D+ G   +    L+  
Sbjct: 408 LYREEMIWLQRSRIAWLKEGDRNTRFFHSKAVWRAKKNKITKLRDSDGTVHNTTKELESM 467

Query: 375 ACNFFQDHLTEKKAIFDVTQAATLLEHIP*LVTSKNNHTLLAPVTLEKVRTVVFHLNPSS 196
           A  +FQ   T   +I D ++  +L++     VT   N  L   V+ E++   +F + P  
Sbjct: 468 ATEYFQRLFTADPSI-DHSRVTSLIKP---KVTDAMNEELCKTVSEEEIANALFQIGPLK 523

Query: 195 AAGSDGFHGHFYQHCWDVIDDDLFHAVQEFFAEVPLP*SIGSTWNVLLPKKDNPTGFGDF 16
           A G DGF G FYQ  W ++ DD+  AVQEFF+   +P  +  T  VL+PK + P    DF
Sbjct: 524 APGPDGFPGRFYQRNWAILKDDIVRAVQEFFSSGTMPSGVNETAIVLIPKTEQPQELKDF 583

Query: 15  RPISL 1
           RPISL
Sbjct: 584 RPISL 588


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score =  121 bits (303), Expect = 6e-25
 Identities = 70/197 (35%), Positives = 103/197 (52%), Gaps = 1/197 (0%)
 Frame = -3

Query: 588 LNKAQAELLGALTNEEDFWE*KT*VKWLQDGDQNTKFFHASVVSRRVKLRITKLLDAAGA 409
           L + + EL     NEE FW+ K+ + W+++GD+NTK+FHA+  +RR + RI KL+D  G 
Sbjct: 318 LARLKKELSQEYNNEEQFWQEKSRIMWMRNGDRNTKYFHAATKNRRAQNRIQKLIDEEGR 377

Query: 408 -WVDGADFLK*QACNFFQDHLTEKKAIFDVTQAATLLEHIP*LVTSKNNHTLLAPVTLEK 232
            W    D  +     F +   +E     DV      LE++  LV+ + N+ LLAP+T E+
Sbjct: 378 EWTSDEDLGRVAEAYFKKLFASE-----DVGYTVEELENLTPLVSDQMNNNLLAPITKEE 432

Query: 231 VRTVVFHLNPSSAAGSDGFHGHFYQHCWDVIDDDLFHAVQEFFAEVPLP*SIGSTWNVLL 52
           V+   F +NP    G DG +G  YQ  W+ + D +   VQ FF    +   +  T   L+
Sbjct: 433 VQRATFSINPHKCPGPDGMNGFLYQQFWETMGDQITEMVQAFFRSGSIEEGMNKTNICLI 492

Query: 51  PKKDNPTGFGDFRPISL 1
           PK        DFRPISL
Sbjct: 493 PKILKAEKMTDFRPISL 509


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease
           H; Endonuclease/exonuclease/phosphatase [Medicago
           truncatula]
          Length = 1246

 Score = 96.7 bits (239), Expect(2) = 6e-25
 Identities = 67/198 (33%), Positives = 99/198 (50%), Gaps = 4/198 (2%)
 Frame = -3

Query: 582 KAQAELLGALTNEEDFWE*KT*VKWLQDGDQNTKFFHASVVSRRVKLRITKLLDAAGAWV 403
           +A   L  AL  +++ W  K   +    GD+NT +FH     R  K  I+ L D      
Sbjct: 334 EAHLILTKALHYQDELWREKLRDQRFIHGDRNTAYFHRISKVRATKNTISFLQDGDAVIT 393

Query: 402 DGADFLK*QACNFFQDHLTEKKAIFDVTQAAT----LLEHIP*LVTSKNNHTLLAPVTLE 235
           D A  ++    N+FQ       AIF V  +      +++ IP LV++ +N++LL      
Sbjct: 394 DPAR-IEVHVLNYFQ-------AIFSVDNSCIQNDLVVDTIPSLVSNVDNNSLLRLPLWG 445

Query: 234 KVRTVVFHLNPSSAAGSDGFHGHFYQHCWDVIDDDLFHAVQEFFAEVPLP*SIGSTWNVL 55
           +V+  VF LN   A G +GF GHFYQ  WD++  D+  +VQ+FF    L  +I S   VL
Sbjct: 446 EVKNAVFTLNGDGAPGPNGFGGHFYQTYWDIVGADVIQSVQDFFISGQLAQNINSNLIVL 505

Query: 54  LPKKDNPTGFGDFRPISL 1
           +PK       GD+RPI+L
Sbjct: 506 IPKVPGARVMGDYRPIAL 523



 Score = 45.4 bits (106), Expect(2) = 6e-25
 Identities = 41/143 (28%), Positives = 58/143 (40%), Gaps = 9/143 (6%)
 Frame = -2

Query: 1087 SMLDFATFLGQAMLREFPTSGRRYTWV-GVLQRGRV*K*LNCILFNTH*IHQFSNLSIEL 911
            S +DF  +    +L   PT G  YTW  G L    V   L+  + N   ++ + + S   
Sbjct: 157  SCIDFMNWSNANLLHHLPTLGAFYTWSNGRLGSDNVALRLDRAICNEEWVNFWRSSSCSA 216

Query: 910  LS-----RVTSDHSLILYK---CVSSGSTPCSFKFQDMWLKYRDFLFVVSSN*DPLITGF 755
            L      R  SDH  +L     C S  S   +FKF   W ++ D   +V+ N      G 
Sbjct: 217  LGNSALVRHQSDHHPLLMSMDFCTSQRSG--NFKFFKTWTEHEDCRRIVAENWSKHTRGH 274

Query: 754  GMFYFSYMLCHLKTALHVWNKIV 686
            GM      L H+K     WN+ V
Sbjct: 275  GMTRLQAKLKHMKQVFRHWNRTV 297


>emb|CAN59718.1| hypothetical protein VITISV_032347 [Vitis vinifera]
          Length = 1198

 Score = 92.4 bits (228), Expect(2) = 2e-24
 Identities = 61/191 (31%), Positives = 90/191 (47%), Gaps = 1/191 (0%)
 Frame = -3

Query: 570  ELLGALTNEEDFWE*KT*VKWLQDGDQNTKFFHASVVSRRVKLRITKLLDAAGAWVDGAD 391
            EL   L  EE  W  K+ VKW+++GD N+KFFH     RR +  I  L+   G  ++  +
Sbjct: 969  ELEDLLLKEEVQWRXKSRVKWIKEGDXNSKFFHRVATGRRSRKFIKSLISERGETLNNXE 1028

Query: 390  FLK*QACNFFQDHLTEKKAIFDVTQAATLLEHIP*LVTSKNNHTLL-APVTLEKVRTVVF 214
             +  +  NFF +  ++ +        +  +E I     S+ +   L    + E+VR  VF
Sbjct: 1029 IISEEIVNFFGNLYSKPEG------DSWKIEGIDWXPISEESAIWLDRXFSEEEVRMTVF 1082

Query: 213  HLNPSSAAGSDGFHGHFYQHCWDVIDDDLFHAVQEFFAEVPLP*SIGSTWNVLLPKKDNP 34
             LN     G DGF    YQ CWDVI +DL     EF  +  +  S  +T+   +PKK   
Sbjct: 1083 QLNKEKXPGPDGFTIAVYQECWDVIKEDLMRVFFEFHTKGVINQSTNATFIAXVPKKSQT 1142

Query: 33   TGFGDFRPISL 1
                D+ PISL
Sbjct: 1143 FKISDYXPISL 1153



 Score = 48.1 bits (113), Expect(2) = 2e-24
 Identities = 51/178 (28%), Positives = 79/178 (44%), Gaps = 9/178 (5%)
 Frame = -2

Query: 1153 CTG--FNVIASLDEFVGPVTSDLGSMLDFATFLGQAMLREFPTSGRRYTWVGVLQRGRV* 980
            C G  FNVI  + E +G     + +M  F  F+ ++ L + P     +TW   +Q   + 
Sbjct: 772  CVGGDFNVIRRISEKMGDSRLTV-NMRCFDEFIRESGLLDPPLRNAAFTWSN-MQVDPIC 829

Query: 979  K*LNCILFNTH*IHQFSNLSIELLSRVTSDHSLILYKCVSSGSTPCSFKFQDMWL----- 815
            K L+  LF++     FS    E L R TSDHS I  +       P  F+F++MWL     
Sbjct: 830  KRLDRFLFSSEWDSFFSQSIQEALPRXTSDHSPICLETNPXKWGPTPFRFENMWLLHPEF 889

Query: 814  --KYRDFLFVVSSN*DPLITGFGMFYFSYMLCHLKTALHVWNKIVLELFLIGLLRQRQ 647
              K+RD+        +  +  +    F   L  +K+ L  WN +V      G LR+R+
Sbjct: 890  KEKFRDWWQ------ECXVEXWEXHKFMRKLKFIKSKLXEWNIVV-----FGDLRERK 936


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