BLASTX nr result

ID: Cephaelis21_contig00009012 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00009012
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283752.1| PREDICTED: polypyrimidine tract-binding prot...    88   8e-16
ref|XP_002283748.1| PREDICTED: polypyrimidine tract-binding prot...    88   8e-16
gb|ABK95931.1| unknown [Populus trichocarpa]                           79   4e-13
gb|ABB55397.1| polypyrimidine tract-binding protein-like [Solanu...    74   2e-11
gb|AEG89705.1| polypyrimidine tract-binding protein 7 [Solanum t...    74   2e-11

>ref|XP_002283752.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform 2
           [Vitis vinifera]
          Length = 420

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 46/85 (54%), Positives = 53/85 (62%)
 Frame = -1

Query: 263 AYSDKSRDYTVPESGLLALLQPSAIPGAETVWENSQAASLPTGSGFVAGGAAQAESSNPQ 84
           A+SD+SRDYT+P+SGLLA+ Q    PGA TVW+N QAA L TG    A  A        Q
Sbjct: 300 AHSDRSRDYTIPDSGLLAVQQAPGHPGATTVWQNPQAAPLYTGHDAAAAAAV-------Q 352

Query: 83  VSSWDPNIQPGRQTFVSVHSTFTGQ 9
           V SWDPN+Q GR TF S  S F  Q
Sbjct: 353 VPSWDPNMQAGRSTFASAASAFPSQ 377


>ref|XP_002283748.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform 1
           [Vitis vinifera] gi|296082938|emb|CBI22239.3| unnamed
           protein product [Vitis vinifera]
          Length = 449

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 46/85 (54%), Positives = 53/85 (62%)
 Frame = -1

Query: 263 AYSDKSRDYTVPESGLLALLQPSAIPGAETVWENSQAASLPTGSGFVAGGAAQAESSNPQ 84
           A+SD+SRDYT+P+SGLLA+ Q    PGA TVW+N QAA L TG    A  A        Q
Sbjct: 329 AHSDRSRDYTIPDSGLLAVQQAPGHPGATTVWQNPQAAPLYTGHDAAAAAAV-------Q 381

Query: 83  VSSWDPNIQPGRQTFVSVHSTFTGQ 9
           V SWDPN+Q GR TF S  S F  Q
Sbjct: 382 VPSWDPNMQAGRSTFASAASAFPSQ 406


>gb|ABK95931.1| unknown [Populus trichocarpa]
          Length = 473

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 38/87 (43%), Positives = 53/87 (60%)
 Frame = -1

Query: 263 AYSDKSRDYTVPESGLLALLQPSAIPGAETVWENSQAASLPTGSGFVAGGAAQAESSNPQ 84
           AYSDKSRDYT+P++ L+A   P  +  A T+W+N QA S+ TG+ +    A   +    Q
Sbjct: 329 AYSDKSRDYTIPDASLIAAQAPG-LHTAPTMWQNPQAGSMYTGNNYATTAAVPVQVPPGQ 387

Query: 83  VSSWDPNIQPGRQTFVSVHSTFTGQLY 3
           V +WDP +Q G Q + SV  T+ GQ Y
Sbjct: 388 VPAWDPTMQAGGQGYASVPGTYPGQTY 414


>gb|ABB55397.1| polypyrimidine tract-binding protein-like [Solanum tuberosum]
          Length = 442

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 36/87 (41%), Positives = 50/87 (57%)
 Frame = -1

Query: 263 AYSDKSRDYTVPESGLLALLQPSAIPGAETVWENSQAASLPTGSGFVAGGAAQAESSNPQ 84
           AYSDKSRDYTVPES LLA+ Q SA+     VW N Q+  + + +G+   G    ++    
Sbjct: 329 AYSDKSRDYTVPESSLLAMQQASAVHATPPVWHNPQSGPVQSSAGYATTGTVPGQAP--- 385

Query: 83  VSSWDPNIQPGRQTFVSVHSTFTGQLY 3
             +W+PN+Q G  TF S  + + G  Y
Sbjct: 386 -PAWNPNLQGGGSTFPSAPTGYPGHSY 411


>gb|AEG89705.1| polypyrimidine tract-binding protein 7 [Solanum tuberosum]
          Length = 467

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 36/87 (41%), Positives = 50/87 (57%)
 Frame = -1

Query: 263 AYSDKSRDYTVPESGLLALLQPSAIPGAETVWENSQAASLPTGSGFVAGGAAQAESSNPQ 84
           AYSDKSRDYTVPES LLA+ Q SA+     VW N Q+  + + +G+   G    ++    
Sbjct: 329 AYSDKSRDYTVPESSLLAMQQASAVHATPPVWHNPQSGPVQSSAGYATTGTVPGQAP--- 385

Query: 83  VSSWDPNIQPGRQTFVSVHSTFTGQLY 3
             +W+PN+Q G  TF S  + + G  Y
Sbjct: 386 -PAWNPNLQGGGSTFPSAPTGYPGHSY 411


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