BLASTX nr result

ID: Cephaelis21_contig00008496 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00008496
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235235.1| RIN4c protein [Glycine max] gi|300079887|gb|...   144   6e-33
ref|XP_002265336.2| PREDICTED: RPM1-interacting protein 4-like [...   144   7e-33
emb|CAN63304.1| hypothetical protein VITISV_002333 [Vitis vinifera]   144   7e-33
gb|ACZ64257.1| RPM1 interacting protein 4 transcript 2 [Lactuca ...   144   1e-32
gb|ACZ64255.1| RPM1 interacting protein 4 transcript 2 [Lactuca ...   144   1e-32

>ref|NP_001235235.1| RIN4c protein [Glycine max] gi|300079887|gb|ADJ67469.1| RIN4c
           protein [Glycine max]
          Length = 246

 Score =  144 bits (364), Expect = 6e-33
 Identities = 72/123 (58%), Positives = 93/123 (75%), Gaps = 4/123 (3%)
 Frame = -2

Query: 370 RPVRQSAGSEHSIERSPMHSNQAKLSGRGGASPAWDGKSSHDSNYGAPGKSRMKPATRVD 191
           RP RQS GSEHSI+RSP+H  QAK  GR   SP+W+GK+S+DS++G PG+SR++P  R D
Sbjct: 116 RPSRQSTGSEHSIDRSPLH-RQAKTPGRD--SPSWEGKNSYDSSHGTPGRSRLRPPNRGD 172

Query: 190 ESPDRSAAVPRFGEWDESNPQSADNYTHIFNQVREERH----NVPSNAPAGKKYQSSYQQ 23
           E+PD+ AAVP+FGEWDESNP SAD YTHIFN+VREE+     +VP   P G++Y +  Q 
Sbjct: 173 ETPDKGAAVPKFGEWDESNPASADGYTHIFNKVREEKQVGAGHVPV-TPNGRQYAARNQP 231

Query: 22  SGD 14
           + D
Sbjct: 232 ADD 234


>ref|XP_002265336.2| PREDICTED: RPM1-interacting protein 4-like [Vitis vinifera]
          Length = 261

 Score =  144 bits (363), Expect = 7e-33
 Identities = 71/117 (60%), Positives = 90/117 (76%), Gaps = 2/117 (1%)
 Frame = -2

Query: 370 RPVRQSAGSEHSIERSPMHSN-QAKLSGRGGASPAWDGK-SSHDSNYGAPGKSRMKPATR 197
           R  R S GSEHSI+RSP+H + QA+++GRG  SP+W+GK SS+DS++G PG+SRMKP TR
Sbjct: 126 RKPRTSGGSEHSIDRSPLHPHHQARIAGRGTGSPSWEGKGSSYDSSHGTPGRSRMKP-TR 184

Query: 196 VDESPDRSAAVPRFGEWDESNPQSADNYTHIFNQVREERHNVPSNAPAGKKYQSSYQ 26
            DESPD+ AAVP+FG+WDE+NP SAD YTHIFN+VREER    +    G   + SYQ
Sbjct: 185 GDESPDKGAAVPKFGDWDENNPSSADGYTHIFNKVREERQTGAATRVPGMASEPSYQ 241


>emb|CAN63304.1| hypothetical protein VITISV_002333 [Vitis vinifera]
          Length = 599

 Score =  144 bits (363), Expect = 7e-33
 Identities = 71/117 (60%), Positives = 90/117 (76%), Gaps = 2/117 (1%)
 Frame = -2

Query: 370 RPVRQSAGSEHSIERSPMHSN-QAKLSGRGGASPAWDGK-SSHDSNYGAPGKSRMKPATR 197
           R  R S GSEHSI+RSP+H + QA+++GRG  SP+W+GK SS+DS++G PG+SRMKP TR
Sbjct: 133 RKPRTSGGSEHSIDRSPLHPHHQARIAGRGTGSPSWEGKGSSYDSSHGTPGRSRMKP-TR 191

Query: 196 VDESPDRSAAVPRFGEWDESNPQSADNYTHIFNQVREERHNVPSNAPAGKKYQSSYQ 26
            DESPD+ AAVP+FG+WDE+NP SAD YTHIFN+VREER    +    G   + SYQ
Sbjct: 192 GDESPDKGAAVPKFGDWDENNPSSADGYTHIFNKVREERQTGAATRVPGMASEPSYQ 248


>gb|ACZ64257.1| RPM1 interacting protein 4 transcript 2 [Lactuca viminea]
          Length = 243

 Score =  144 bits (362), Expect = 1e-32
 Identities = 69/99 (69%), Positives = 86/99 (86%), Gaps = 2/99 (2%)
 Frame = -2

Query: 370 RPVRQSAGSEHSIERSPMHSN-QAKLS-GRGGASPAWDGKSSHDSNYGAPGKSRMKPATR 197
           RPV+ SAGSE+S +RSP+H + QAK++ G+G  SPAW+GK+S+DS++G P +SRMKPA R
Sbjct: 111 RPVKHSAGSENSFDRSPLHPHYQAKVAAGKGSGSPAWEGKNSYDSSHGTPSRSRMKPA-R 169

Query: 196 VDESPDRSAAVPRFGEWDESNPQSADNYTHIFNQVREER 80
            D+SPDR AAVPRFGEWDE+NP SADNYTHIFN+VREER
Sbjct: 170 GDDSPDRGAAVPRFGEWDENNPSSADNYTHIFNKVREER 208


>gb|ACZ64255.1| RPM1 interacting protein 4 transcript 2 [Lactuca indica]
          Length = 243

 Score =  144 bits (362), Expect = 1e-32
 Identities = 69/99 (69%), Positives = 86/99 (86%), Gaps = 2/99 (2%)
 Frame = -2

Query: 370 RPVRQSAGSEHSIERSPMHSN-QAKLS-GRGGASPAWDGKSSHDSNYGAPGKSRMKPATR 197
           RPV+ SAGSE+S +RSP+H + QAK++ G+G  SPAW+GK+S+DS++G P +SRMKPA R
Sbjct: 111 RPVKHSAGSENSFDRSPLHPHYQAKVAAGKGSGSPAWEGKNSYDSSHGTPSRSRMKPA-R 169

Query: 196 VDESPDRSAAVPRFGEWDESNPQSADNYTHIFNQVREER 80
            D+SPDR AAVPRFGEWDE+NP SADNYTHIFN+VREER
Sbjct: 170 GDDSPDRGAAVPRFGEWDENNPSSADNYTHIFNKVREER 208


Top