BLASTX nr result

ID: Cephaelis21_contig00008440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00008440
         (205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326280.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-19
ref|XP_002879109.1| hypothetical protein ARALYDRAFT_481687 [Arab...    97   2e-18
ref|XP_002516976.1| conserved hypothetical protein [Ricinus comm...    96   4e-18
ref|NP_180390.2| TATA-binding related factor (TRF) of subunit 20...    94   1e-17
emb|CBI27822.3| unnamed protein product [Vitis vinifera]               94   2e-17

>ref|XP_002326280.1| predicted protein [Populus trichocarpa] gi|222833473|gb|EEE71950.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 40/52 (76%), Positives = 48/52 (92%)
 Frame = +3

Query: 30  MPIKWVLHWQPNAGATVSTQILTEVCQCIEGINGVKEGRWKATLSFYKPVVR 185
           MP+KWVLHWQPNAG TV+TQIL EV QC+E INGVKEGRWKAT+++YKP++R
Sbjct: 1   MPLKWVLHWQPNAGTTVNTQILNEVTQCVESINGVKEGRWKATVTYYKPILR 52


>ref|XP_002879109.1| hypothetical protein ARALYDRAFT_481687 [Arabidopsis lyrata subsp.
           lyrata] gi|297324948|gb|EFH55368.1| hypothetical protein
           ARALYDRAFT_481687 [Arabidopsis lyrata subsp. lyrata]
          Length = 219

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 40/52 (76%), Positives = 48/52 (92%)
 Frame = +3

Query: 30  MPIKWVLHWQPNAGATVSTQILTEVCQCIEGINGVKEGRWKATLSFYKPVVR 185
           MP+KWVLHWQPN G+TVS+QIL EV QC+E INGVKEGRWKATL++YKP++R
Sbjct: 1   MPVKWVLHWQPNQGSTVSSQILNEVTQCVESINGVKEGRWKATLNYYKPMLR 52


>ref|XP_002516976.1| conserved hypothetical protein [Ricinus communis]
           gi|223544064|gb|EEF45590.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 221

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 41/57 (71%), Positives = 49/57 (85%)
 Frame = +3

Query: 30  MPIKWVLHWQPNAGATVSTQILTEVCQCIEGINGVKEGRWKATLSFYKPVVRGFSIS 200
           MP+KWVLHWQPNAG TV+TQIL EV QC+E INGVKEGRWKA L+ YKP++R  S++
Sbjct: 1   MPLKWVLHWQPNAGTTVNTQILNEVSQCVESINGVKEGRWKAALTSYKPMLRDQSLT 57


>ref|NP_180390.2| TATA-binding related factor (TRF) of subunit 20 of Mediator complex
           [Arabidopsis thaliana]
           gi|75127115|sp|Q6NPF4.1|MD20A_ARATH RecName:
           Full=Mediator of RNA polymerase II transcription subunit
           20a gi|38454106|gb|AAR20747.1| At2g28230 [Arabidopsis
           thaliana] gi|38604010|gb|AAR24748.1| At2g28230
           [Arabidopsis thaliana] gi|330252999|gb|AEC08093.1|
           TATA-binding related factor (TRF) of subunit 20 of
           Mediator complex [Arabidopsis thaliana]
          Length = 219

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 38/52 (73%), Positives = 47/52 (90%)
 Frame = +3

Query: 30  MPIKWVLHWQPNAGATVSTQILTEVCQCIEGINGVKEGRWKATLSFYKPVVR 185
           MP+KWVLHWQPN G+TVS+QIL E  QC+E INGVKEGRWKATL++YKP+++
Sbjct: 1   MPVKWVLHWQPNQGSTVSSQILNEATQCVESINGVKEGRWKATLNYYKPMLK 52


>emb|CBI27822.3| unnamed protein product [Vitis vinifera]
          Length = 223

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 38/52 (73%), Positives = 46/52 (88%)
 Frame = +3

Query: 30  MPIKWVLHWQPNAGATVSTQILTEVCQCIEGINGVKEGRWKATLSFYKPVVR 185
           MP+KWV HWQPNAG TV++Q++ EV QC+E INGVKEGRWKATL+FYKP+ R
Sbjct: 1   MPLKWVFHWQPNAGTTVNSQMINEVSQCVESINGVKEGRWKATLTFYKPMFR 52


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