BLASTX nr result
ID: Cephaelis21_contig00008440
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cephaelis21_contig00008440 (205 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002326280.1| predicted protein [Populus trichocarpa] gi|2... 98 8e-19 ref|XP_002879109.1| hypothetical protein ARALYDRAFT_481687 [Arab... 97 2e-18 ref|XP_002516976.1| conserved hypothetical protein [Ricinus comm... 96 4e-18 ref|NP_180390.2| TATA-binding related factor (TRF) of subunit 20... 94 1e-17 emb|CBI27822.3| unnamed protein product [Vitis vinifera] 94 2e-17 >ref|XP_002326280.1| predicted protein [Populus trichocarpa] gi|222833473|gb|EEE71950.1| predicted protein [Populus trichocarpa] Length = 221 Score = 97.8 bits (242), Expect = 8e-19 Identities = 40/52 (76%), Positives = 48/52 (92%) Frame = +3 Query: 30 MPIKWVLHWQPNAGATVSTQILTEVCQCIEGINGVKEGRWKATLSFYKPVVR 185 MP+KWVLHWQPNAG TV+TQIL EV QC+E INGVKEGRWKAT+++YKP++R Sbjct: 1 MPLKWVLHWQPNAGTTVNTQILNEVTQCVESINGVKEGRWKATVTYYKPILR 52 >ref|XP_002879109.1| hypothetical protein ARALYDRAFT_481687 [Arabidopsis lyrata subsp. lyrata] gi|297324948|gb|EFH55368.1| hypothetical protein ARALYDRAFT_481687 [Arabidopsis lyrata subsp. lyrata] Length = 219 Score = 96.7 bits (239), Expect = 2e-18 Identities = 40/52 (76%), Positives = 48/52 (92%) Frame = +3 Query: 30 MPIKWVLHWQPNAGATVSTQILTEVCQCIEGINGVKEGRWKATLSFYKPVVR 185 MP+KWVLHWQPN G+TVS+QIL EV QC+E INGVKEGRWKATL++YKP++R Sbjct: 1 MPVKWVLHWQPNQGSTVSSQILNEVTQCVESINGVKEGRWKATLNYYKPMLR 52 >ref|XP_002516976.1| conserved hypothetical protein [Ricinus communis] gi|223544064|gb|EEF45590.1| conserved hypothetical protein [Ricinus communis] Length = 221 Score = 95.5 bits (236), Expect = 4e-18 Identities = 41/57 (71%), Positives = 49/57 (85%) Frame = +3 Query: 30 MPIKWVLHWQPNAGATVSTQILTEVCQCIEGINGVKEGRWKATLSFYKPVVRGFSIS 200 MP+KWVLHWQPNAG TV+TQIL EV QC+E INGVKEGRWKA L+ YKP++R S++ Sbjct: 1 MPLKWVLHWQPNAGTTVNTQILNEVSQCVESINGVKEGRWKAALTSYKPMLRDQSLT 57 >ref|NP_180390.2| TATA-binding related factor (TRF) of subunit 20 of Mediator complex [Arabidopsis thaliana] gi|75127115|sp|Q6NPF4.1|MD20A_ARATH RecName: Full=Mediator of RNA polymerase II transcription subunit 20a gi|38454106|gb|AAR20747.1| At2g28230 [Arabidopsis thaliana] gi|38604010|gb|AAR24748.1| At2g28230 [Arabidopsis thaliana] gi|330252999|gb|AEC08093.1| TATA-binding related factor (TRF) of subunit 20 of Mediator complex [Arabidopsis thaliana] Length = 219 Score = 94.0 bits (232), Expect = 1e-17 Identities = 38/52 (73%), Positives = 47/52 (90%) Frame = +3 Query: 30 MPIKWVLHWQPNAGATVSTQILTEVCQCIEGINGVKEGRWKATLSFYKPVVR 185 MP+KWVLHWQPN G+TVS+QIL E QC+E INGVKEGRWKATL++YKP+++ Sbjct: 1 MPVKWVLHWQPNQGSTVSSQILNEATQCVESINGVKEGRWKATLNYYKPMLK 52 >emb|CBI27822.3| unnamed protein product [Vitis vinifera] Length = 223 Score = 93.6 bits (231), Expect = 2e-17 Identities = 38/52 (73%), Positives = 46/52 (88%) Frame = +3 Query: 30 MPIKWVLHWQPNAGATVSTQILTEVCQCIEGINGVKEGRWKATLSFYKPVVR 185 MP+KWV HWQPNAG TV++Q++ EV QC+E INGVKEGRWKATL+FYKP+ R Sbjct: 1 MPLKWVFHWQPNAGTTVNSQMINEVSQCVESINGVKEGRWKATLTFYKPMFR 52