BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00008381
         (1141 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282635.1| PREDICTED: putative exosome complex componen...   102   1e-19
ref|XP_002511406.1| Exosome complex exonuclease RRP40, putative ...    99   3e-18
ref|XP_003518749.1| PREDICTED: putative exosome complex componen...    95   3e-17
ref|XP_002321594.1| predicted protein [Populus trichocarpa] gi|2...    93   1e-16
ref|XP_002318044.1| predicted protein [Populus trichocarpa] gi|1...    93   1e-16

>ref|XP_002282635.1| PREDICTED: putative exosome complex component rrp40 [Vitis
           vinifera] gi|297733775|emb|CBI15022.3| unnamed protein
           product [Vitis vinifera]
          Length = 237

 Score =  102 bits (255), Expect = 1e-19
 Identities = 49/63 (77%), Positives = 58/63 (92%)
 Frame = -2

Query: 255 TCPVLEAFGKDVSFEIAVGLNGQVWVNAASPATIILVTNAIMKSESLSAVQQKILVDRLL 76
           TCPVLEA GK +SFEIAVGLNG+VWVNA+SP+T+ILV NAIM SESLS VQQKI+VD+LL
Sbjct: 174 TCPVLEALGKKLSFEIAVGLNGRVWVNASSPSTVILVANAIMNSESLSVVQQKIMVDKLL 233

Query: 75  KRV 67
           +R+
Sbjct: 234 QRI 236



 Score = 53.5 bits (127), Expect(2) = 5e-12
 Identities = 25/31 (80%), Positives = 27/31 (87%)
 Frame = -1

Query: 475 VSCAIATGKAAGFGPLKDGYMFESSIGLSRM 383
           +SC  A+GKAA FGPLKDGYMFESS GLSRM
Sbjct: 138 LSCTDASGKAAEFGPLKDGYMFESSTGLSRM 168



 Score = 44.3 bits (103), Expect(2) = 5e-12
 Identities = 19/25 (76%), Positives = 21/25 (84%)
 Frame = -2

Query: 636 QVGTLLYVHVVKANIGMNPEISCMD 562
           + GTLLYV VVKAN GMNPE+SC D
Sbjct: 118 EAGTLLYVRVVKANTGMNPELSCTD 142


>ref|XP_002511406.1| Exosome complex exonuclease RRP40, putative [Ricinus communis]
           gi|223550521|gb|EEF52008.1| Exosome complex exonuclease
           RRP40, putative [Ricinus communis]
          Length = 234

 Score = 98.6 bits (244), Expect = 3e-18
 Identities = 47/63 (74%), Positives = 56/63 (88%)
 Frame = -2

Query: 255 TCPVLEAFGKDVSFEIAVGLNGQVWVNAASPATIILVTNAIMKSESLSAVQQKILVDRLL 76
           TCPVLEA GK +SFEIAVG+NG+VWVNA SP+TII+V NAIM SE+LSAVQQKI+VD LL
Sbjct: 149 TCPVLEALGKKLSFEIAVGINGRVWVNATSPSTIIVVANAIMNSETLSAVQQKIMVDNLL 208

Query: 75  KRV 67
            ++
Sbjct: 209 DKI 211



 Score = 46.6 bits (109), Expect(2) = 1e-09
 Identities = 22/31 (70%), Positives = 24/31 (77%)
 Frame = -1

Query: 475 VSCAIATGKAAGFGPLKDGYMFESSIGLSRM 383
           +SC  A+GKA  FG LKDGYMFE S GLSRM
Sbjct: 113 LSCTDASGKAVEFGVLKDGYMFECSTGLSRM 143



 Score = 43.5 bits (101), Expect(2) = 1e-09
 Identities = 19/25 (76%), Positives = 21/25 (84%)
 Frame = -2

Query: 636 QVGTLLYVHVVKANIGMNPEISCMD 562
           + GTLLYV VVKAN GMNPE+SC D
Sbjct: 93  EAGTLLYVRVVKANPGMNPELSCTD 117


>ref|XP_003518749.1| PREDICTED: putative exosome complex component rrp40-like [Glycine
           max]
          Length = 240

 Score = 95.1 bits (235), Expect = 3e-17
 Identities = 44/64 (68%), Positives = 56/64 (87%)
 Frame = -2

Query: 255 TCPVLEAFGKDVSFEIAVGLNGQVWVNAASPATIILVTNAIMKSESLSAVQQKILVDRLL 76
           TCPVL+A GK +SFEIAVGLNG+VWV+AASP T I+V NAIM SE+LS  QQ+I+V++LL
Sbjct: 177 TCPVLDALGKKLSFEIAVGLNGRVWVSAASPQTTIVVANAIMNSETLSGAQQRIMVEKLL 236

Query: 75  KRVH 64
           +R+H
Sbjct: 237 ERIH 240



 Score = 46.2 bits (108), Expect(2) = 6e-09
 Identities = 21/31 (67%), Positives = 25/31 (80%)
 Frame = -1

Query: 475 VSCAIATGKAAGFGPLKDGYMFESSIGLSRM 383
           ++C  A+GKAA FG LKDGYMFE + GLSRM
Sbjct: 141 LACTDASGKAAEFGALKDGYMFECTTGLSRM 171



 Score = 41.2 bits (95), Expect(2) = 6e-09
 Identities = 16/25 (64%), Positives = 21/25 (84%)
 Frame = -2

Query: 636 QVGTLLYVHVVKANIGMNPEISCMD 562
           ++GTL+Y  VVKAN GMNPE++C D
Sbjct: 121 EIGTLIYARVVKANPGMNPELACTD 145


>ref|XP_002321594.1| predicted protein [Populus trichocarpa] gi|222868590|gb|EEF05721.1|
           predicted protein [Populus trichocarpa]
          Length = 79

 Score = 93.2 bits (230), Expect = 1e-16
 Identities = 43/63 (68%), Positives = 55/63 (87%)
 Frame = -2

Query: 255 TCPVLEAFGKDVSFEIAVGLNGQVWVNAASPATIILVTNAIMKSESLSAVQQKILVDRLL 76
           TCPVLEA GK +SFEIAVGLNG+VWV A SP+T+I+V NAI+KSESLS  QQKI+ ++LL
Sbjct: 16  TCPVLEALGKKLSFEIAVGLNGRVWVKADSPSTVIIVVNAIIKSESLSGAQQKIMAEKLL 75

Query: 75  KRV 67
           +++
Sbjct: 76  QKI 78


>ref|XP_002318044.1| predicted protein [Populus trichocarpa] gi|118482713|gb|ABK93275.1|
           unknown [Populus trichocarpa]
           gi|222858717|gb|EEE96264.1| predicted protein [Populus
           trichocarpa]
          Length = 242

 Score = 93.2 bits (230), Expect = 1e-16
 Identities = 43/63 (68%), Positives = 55/63 (87%)
 Frame = -2

Query: 255 TCPVLEAFGKDVSFEIAVGLNGQVWVNAASPATIILVTNAIMKSESLSAVQQKILVDRLL 76
           TCPVLEA GK +SFEIAVGLNG+VWVNA SP+ +I+V NAIM SE+LS VQQKI+ ++LL
Sbjct: 177 TCPVLEALGKKLSFEIAVGLNGRVWVNANSPSIVIIVANAIMNSETLSGVQQKIMAEKLL 236

Query: 75  KRV 67
           +++
Sbjct: 237 QKI 239



 Score = 48.5 bits (114), Expect(2) = 3e-10
 Identities = 23/31 (74%), Positives = 25/31 (80%)
 Frame = -1

Query: 475 VSCAIATGKAAGFGPLKDGYMFESSIGLSRM 383
           +SC  A+GKAA FG LKDGYMFE S GLSRM
Sbjct: 141 LSCTDASGKAAEFGALKDGYMFECSTGLSRM 171



 Score = 43.5 bits (101), Expect(2) = 3e-10
 Identities = 19/25 (76%), Positives = 21/25 (84%)
 Frame = -2

Query: 636 QVGTLLYVHVVKANIGMNPEISCMD 562
           + GTLLYV VVKAN GMNPE+SC D
Sbjct: 121 EAGTLLYVRVVKANPGMNPELSCTD 145