BLASTX nr result

ID: Cephaelis21_contig00008350 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00008350
         (983 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280012.1| PREDICTED: 40S ribosomal protein S13 [Vitis ...   296   7e-78
ref|NP_001237229.1| 40S ribosomal protein S13 [Glycine max] gi|3...   295   1e-77
gb|ABB86273.1| cytoplasmic ribosomal protein S13-like [Solanum t...   295   1e-77
gb|AFK48673.1| unknown [Lotus japonicus] gi|388521665|gb|AFK4889...   294   2e-77
dbj|BAA96366.1| cytoplasmic ribosomal protein S13 [Panax ginseng]     294   3e-77

>ref|XP_002280012.1| PREDICTED: 40S ribosomal protein S13 [Vitis vinifera]
           gi|147820740|emb|CAN69640.1| hypothetical protein
           VITISV_028568 [Vitis vinifera]
           gi|296089171|emb|CBI38874.3| unnamed protein product
           [Vitis vinifera]
          Length = 151

 Score =  296 bits (757), Expect = 7e-78
 Identities = 146/151 (96%), Positives = 150/151 (99%)
 Frame = -2

Query: 880 MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSHIGVILRDSHGI 701
           MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVE+NICKFAKKG+TPS IGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGMTPSQIGVILRDSHGI 60

Query: 700 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 521
           AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 520 RIHRLARYYKKTKKLPPIWKYESTTASTLVA 428
           RIHRLARYYK+TKKLPP+WKYESTTASTLVA
Sbjct: 121 RIHRLARYYKRTKKLPPVWKYESTTASTLVA 151


>ref|NP_001237229.1| 40S ribosomal protein S13 [Glycine max]
           gi|356514135|ref|XP_003525762.1| PREDICTED: 40S
           ribosomal protein S13-like [Glycine max]
           gi|356514137|ref|XP_003525763.1| PREDICTED: 40S
           ribosomal protein S13-like [Glycine max]
           gi|356563264|ref|XP_003549884.1| PREDICTED: 40S
           ribosomal protein S13-like [Glycine max]
           gi|54039313|sp|P62302.1|RS13_SOYBN RecName: Full=40S
           ribosomal protein S13 gi|44662862|gb|AAS47510.1|
           ribosomal protein S13 [Glycine max]
           gi|161367348|gb|ABX71080.1| ribosomal protein S13
           [Glycine max] gi|255625887|gb|ACU13288.1| unknown
           [Glycine max]
          Length = 151

 Score =  295 bits (754), Expect = 1e-77
 Identities = 146/151 (96%), Positives = 149/151 (98%)
 Frame = -2

Query: 880 MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSHIGVILRDSHGI 701
           MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVE+NICKFAKKGLTPS IGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGI 60

Query: 700 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 521
           AQV SVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVNSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 520 RIHRLARYYKKTKKLPPIWKYESTTASTLVA 428
           RIHRLARYYKKTKKLPP+WKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


>gb|ABB86273.1| cytoplasmic ribosomal protein S13-like [Solanum tuberosum]
          Length = 151

 Score =  295 bits (754), Expect = 1e-77
 Identities = 146/151 (96%), Positives = 149/151 (98%)
 Frame = -2

Query: 880 MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSHIGVILRDSHGI 701
           MGRMHSRGKGIS+SALPYKRTPPSWLKIS+ DVEDNICKFAKKGLTPS IGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKISAPDVEDNICKFAKKGLTPSQIGVILRDSHGI 60

Query: 700 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 521
           AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 520 RIHRLARYYKKTKKLPPIWKYESTTASTLVA 428
           RIHRLARYYKKTKKLPP+WKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


>gb|AFK48673.1| unknown [Lotus japonicus] gi|388521665|gb|AFK48894.1| unknown
           [Lotus japonicus]
          Length = 151

 Score =  294 bits (753), Expect = 2e-77
 Identities = 145/151 (96%), Positives = 150/151 (99%)
 Frame = -2

Query: 880 MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSHIGVILRDSHGI 701
           MGRMHSRGKGISSSALPYKRTPPSWLKI+SQDVE+NICKFAKKGLTPS IGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISSSALPYKRTPPSWLKIASQDVEENICKFAKKGLTPSQIGVILRDSHGI 60

Query: 700 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 521
           AQV+SVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVRSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 520 RIHRLARYYKKTKKLPPIWKYESTTASTLVA 428
           RIHRLARYYKKTKKLPP+WKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


>dbj|BAA96366.1| cytoplasmic ribosomal protein S13 [Panax ginseng]
          Length = 151

 Score =  294 bits (752), Expect = 3e-77
 Identities = 145/151 (96%), Positives = 149/151 (98%)
 Frame = -2

Query: 880 MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSHIGVILRDSHGI 701
           MGRMHSRGKGIS+SALPYKRTPPSWLKI+ QDV+DNICKFAKKGLTPS IGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKITPQDVDDNICKFAKKGLTPSQIGVILRDSHGI 60

Query: 700 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 521
           AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 520 RIHRLARYYKKTKKLPPIWKYESTTASTLVA 428
           RIHRLARYYKKTKKLPP+WKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


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