BLASTX nr result

ID: Cephaelis21_contig00008345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00008345
         (565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002894659.1| clathrin adaptor complexes medium subunit fa...   100   2e-19
ref|XP_003536038.1| PREDICTED: AP-3 complex subunit mu-1-like [G...    97   2e-18
ref|XP_004167320.1| PREDICTED: AP-3 complex subunit mu-1-like [C...    95   7e-18
ref|XP_004139522.1| PREDICTED: AP-3 complex subunit mu-1-like [C...    95   7e-18
ref|XP_002330025.1| predicted protein [Populus trichocarpa] gi|2...    95   9e-18

>ref|XP_002894659.1| clathrin adaptor complexes medium subunit family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297340501|gb|EFH70918.1| clathrin adaptor complexes
           medium subunit family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 415

 Score =  100 bits (248), Expect = 2e-19
 Identities = 55/102 (53%), Positives = 62/102 (60%), Gaps = 37/102 (36%)
 Frame = -1

Query: 544 EVMLEKQLTGHKVDRSICA*FWEQSIALGDSFK--------------------------- 446
           EVMLEKQLTGH+VDRSICA FW+QSI+ GDSFK                           
Sbjct: 13  EVMLEKQLTGHRVDRSICAWFWDQSISQGDSFKLLPVIASPTHYLFQIVRDGITLLACSQ 72

Query: 445 ----------FLCRVADVLSNYLGGLNEDMMKDNFVIVYEVL 350
                     FLCRVADVLS YLGGLNED++KDNF+IVYE+L
Sbjct: 73  VEMPPLMAIEFLCRVADVLSEYLGGLNEDLVKDNFIIVYELL 114


>ref|XP_003536038.1| PREDICTED: AP-3 complex subunit mu-1-like [Glycine max]
          Length = 415

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 54/108 (50%), Positives = 65/108 (60%), Gaps = 37/108 (34%)
 Frame = -1

Query: 562 VVTGLKEVMLEKQLTGHKVDRSICA*FWEQSIALGDSFK--------------------- 446
           +V+   EVMLEKQLTGH+VDRSICA FWEQ+I+LGDSFK                     
Sbjct: 7   LVSDAGEVMLEKQLTGHRVDRSICAWFWEQAISLGDSFKQQPVIASPTHYIFQVFRDGIT 66

Query: 445 ----------------FLCRVADVLSNYLGGLNEDMMKDNFVIVYEVL 350
                           FLCRVA+VL++Y G LNED++KDNFVIVYE+L
Sbjct: 67  FLGCTQVEMPPLMAIEFLCRVANVLNDYFGALNEDIIKDNFVIVYELL 114


>ref|XP_004167320.1| PREDICTED: AP-3 complex subunit mu-1-like [Cucumis sativus]
          Length = 415

 Score = 95.1 bits (235), Expect = 7e-18
 Identities = 52/102 (50%), Positives = 61/102 (59%), Gaps = 37/102 (36%)
 Frame = -1

Query: 544 EVMLEKQLTGHKVDRSICA*FWEQSIALGDSFK--------------------------- 446
           E+MLEKQLTGH+VDRSIC  FWEQS++ GDSFK                           
Sbjct: 13  EIMLEKQLTGHRVDRSICVWFWEQSLSQGDSFKLQPVIASPTHYLFQVIRAGITFLACTQ 72

Query: 445 ----------FLCRVADVLSNYLGGLNEDMMKDNFVIVYEVL 350
                     FLCRVADVL++YLG LNED++KDNFVIVYE+L
Sbjct: 73  VEMPPLMGIEFLCRVADVLTDYLGELNEDLVKDNFVIVYELL 114


>ref|XP_004139522.1| PREDICTED: AP-3 complex subunit mu-1-like [Cucumis sativus]
          Length = 415

 Score = 95.1 bits (235), Expect = 7e-18
 Identities = 52/102 (50%), Positives = 61/102 (59%), Gaps = 37/102 (36%)
 Frame = -1

Query: 544 EVMLEKQLTGHKVDRSICA*FWEQSIALGDSFK--------------------------- 446
           E+MLEKQLTGH+VDRSIC  FWEQS++ GDSFK                           
Sbjct: 13  EIMLEKQLTGHRVDRSICVWFWEQSLSQGDSFKLQPVIASPTHYLFQVIRAGITFLACTQ 72

Query: 445 ----------FLCRVADVLSNYLGGLNEDMMKDNFVIVYEVL 350
                     FLCRVADVL++YLG LNED++KDNFVIVYE+L
Sbjct: 73  VEMPPLMGIEFLCRVADVLTDYLGELNEDLVKDNFVIVYELL 114


>ref|XP_002330025.1| predicted protein [Populus trichocarpa] gi|222871450|gb|EEF08581.1|
           predicted protein [Populus trichocarpa]
          Length = 415

 Score = 94.7 bits (234), Expect = 9e-18
 Identities = 53/102 (51%), Positives = 61/102 (59%), Gaps = 37/102 (36%)
 Frame = -1

Query: 544 EVMLEKQLTGHKVDRSICA*FWEQSIALGDSFK--------------------------- 446
           EVMLEKQLTGH+VDRSICA FW+Q ++ GDSFK                           
Sbjct: 13  EVMLEKQLTGHRVDRSICAWFWDQIVSQGDSFKQQPVIASPTHYLFQIVREGITFLACTQ 72

Query: 445 ----------FLCRVADVLSNYLGGLNEDMMKDNFVIVYEVL 350
                     FLCRVADVLS+YL GLNED++KDNFVIVYE+L
Sbjct: 73  VEKPPLMGIEFLCRVADVLSDYLEGLNEDVIKDNFVIVYELL 114


Top