BLASTX nr result

ID: Cephaelis21_contig00008309 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00008309
         (1744 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275908.1| PREDICTED: high mobility group B protein 14 ...   165   4e-38
ref|XP_002305996.1| high mobility group family [Populus trichoca...   164   9e-38
ref|XP_003531090.1| PREDICTED: high mobility group B protein 14-...   163   1e-37
ref|XP_002519708.1| DNA-binding protein MNB1B, putative [Ricinus...   162   3e-37
ref|NP_001237839.1| uncharacterized protein LOC100305607 [Glycin...   160   1e-36

>ref|XP_002275908.1| PREDICTED: high mobility group B protein 14 [Vitis vinifera]
           gi|297740668|emb|CBI30850.3| unnamed protein product
           [Vitis vinifera]
          Length = 175

 Score =  165 bits (417), Expect = 4e-38
 Identities = 83/137 (60%), Positives = 101/137 (73%), Gaps = 6/137 (4%)
 Frame = -2

Query: 519 MVLRVRTSEQMKK------ITAKLNEPMXXXXXXXXXXXXXXXRIDAFKPKKPPTAFFYF 358
           MVLRVR++E++K+      ++ K  +P                 +D+ KPKKPPTAFFYF
Sbjct: 40  MVLRVRSTEKIKRAVMESRVSEKEKKPRSGNKAKAKTKKRSQR-VDSKKPKKPPTAFFYF 98

Query: 357 LEDFRKEFQEKNPDIKSMRDIGKACGDKWKTMNYEEKVHYYDIATEKRAEFDKAMADYNK 178
           LEDFRKEFQE+NPD+KSMRDIGKACG+KWKTM YEEKV YYDIATEKRAEFD+AMADY K
Sbjct: 99  LEDFRKEFQEQNPDVKSMRDIGKACGEKWKTMTYEEKVQYYDIATEKRAEFDRAMADYIK 158

Query: 177 RKEMGEFQEYEEDSDFE 127
           R+E GE +E E+   +E
Sbjct: 159 RQESGEDEEIEDSEAYE 175


>ref|XP_002305996.1| high mobility group family [Populus trichocarpa]
           gi|222848960|gb|EEE86507.1| high mobility group family
           [Populus trichocarpa]
          Length = 165

 Score =  164 bits (414), Expect = 9e-38
 Identities = 79/134 (58%), Positives = 99/134 (73%)
 Frame = -2

Query: 528 QGGMVLRVRTSEQMKKITAKLNEPMXXXXXXXXXXXXXXXRIDAFKPKKPPTAFFYFLED 349
           +G MVLR+R++E  K+ T +                    + DA KPKKPPTAFFYFLED
Sbjct: 31  EGKMVLRIRSNEITKRSTRQQRVVRSENERRPKSKTKKNKKFDAKKPKKPPTAFFYFLED 90

Query: 348 FRKEFQEKNPDIKSMRDIGKACGDKWKTMNYEEKVHYYDIATEKRAEFDKAMADYNKRKE 169
           FRKEFQE+NPD+KSMR++GKACG+KWKTM YEEKV YYDIATEKRAEFD+A ++Y KRKE
Sbjct: 91  FRKEFQEQNPDVKSMREVGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRATSEYIKRKE 150

Query: 168 MGEFQEYEEDSDFE 127
            GE ++ E+ S+F+
Sbjct: 151 SGEDEDPEDASEFD 164


>ref|XP_003531090.1| PREDICTED: high mobility group B protein 14-like [Glycine max]
          Length = 148

 Score =  163 bits (413), Expect = 1e-37
 Identities = 77/131 (58%), Positives = 97/131 (74%)
 Frame = -2

Query: 519 MVLRVRTSEQMKKITAKLNEPMXXXXXXXXXXXXXXXRIDAFKPKKPPTAFFYFLEDFRK 340
           +VLR++++E +K+   + N                    DA KPKKPPTAFFYFLEDFRK
Sbjct: 21  LVLRIKSNEGIKRSVRQTNS----RKKPKAKQKKNKQMFDAMKPKKPPTAFFYFLEDFRK 76

Query: 339 EFQEKNPDIKSMRDIGKACGDKWKTMNYEEKVHYYDIATEKRAEFDKAMADYNKRKEMGE 160
           EFQE+NPD+KSMRDIGKACG+KWKTM YEEKV YYDIAT+KR EFD AMA++NK+ E GE
Sbjct: 77  EFQEQNPDVKSMRDIGKACGEKWKTMTYEEKVQYYDIATKKREEFDNAMAEFNKKMENGE 136

Query: 159 FQEYEEDSDFE 127
           F E +++S+F+
Sbjct: 137 FDETDDESEFD 147


>ref|XP_002519708.1| DNA-binding protein MNB1B, putative [Ricinus communis]
           gi|223541125|gb|EEF42681.1| DNA-binding protein MNB1B,
           putative [Ricinus communis]
          Length = 198

 Score =  162 bits (410), Expect = 3e-37
 Identities = 72/93 (77%), Positives = 86/93 (92%)
 Frame = -2

Query: 405 IDAFKPKKPPTAFFYFLEDFRKEFQEKNPDIKSMRDIGKACGDKWKTMNYEEKVHYYDIA 226
           +D+ KPKKPPTAFFYFLEDFRK+FQ++NPD+KSMR+IGKACG+KWK M YEEKV YYDIA
Sbjct: 105 LDSKKPKKPPTAFFYFLEDFRKDFQKQNPDVKSMREIGKACGEKWKMMTYEEKVKYYDIA 164

Query: 225 TEKRAEFDKAMADYNKRKEMGEFQEYEEDSDFE 127
           TEKRAEFDKAMA+Y K+KE GEF+E E+DS+F+
Sbjct: 165 TEKRAEFDKAMAEYIKKKESGEFEEVEDDSEFD 197


>ref|NP_001237839.1| uncharacterized protein LOC100305607 [Glycine max]
           gi|255626057|gb|ACU13373.1| unknown [Glycine max]
          Length = 150

 Score =  160 bits (405), Expect = 1e-36
 Identities = 75/131 (57%), Positives = 97/131 (74%)
 Frame = -2

Query: 519 MVLRVRTSEQMKKITAKLNEPMXXXXXXXXXXXXXXXRIDAFKPKKPPTAFFYFLEDFRK 340
           +VLR++++E  K+   + N                  + DA KP+KPPTAFFYFLEDFRK
Sbjct: 23  LVLRIKSNEGTKRSVRQTNS----RKKLKAKQKKNKQKFDAMKPRKPPTAFFYFLEDFRK 78

Query: 339 EFQEKNPDIKSMRDIGKACGDKWKTMNYEEKVHYYDIATEKRAEFDKAMADYNKRKEMGE 160
           EFQE+NPD++SMRDIGKACG+KWKTM YEEKV YYDIAT+KR EFD AMA++NK+ E GE
Sbjct: 79  EFQEQNPDVRSMRDIGKACGEKWKTMTYEEKVQYYDIATKKREEFDSAMAEFNKKMENGE 138

Query: 159 FQEYEEDSDFE 127
           F E +++S+F+
Sbjct: 139 FDETDDESEFD 149


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