BLASTX nr result

ID: Cephaelis21_contig00008170 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00008170
         (1380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266112.1| PREDICTED: ribosomal RNA small subunit methy...   558   e-157
ref|XP_002300381.1| predicted protein [Populus trichocarpa] gi|2...   552   e-155
ref|XP_003519634.1| PREDICTED: ribosomal RNA small subunit methy...   542   e-152
ref|XP_003617839.1| Ribosomal RNA small subunit methyltransferas...   539   e-151
ref|XP_002522772.1| ribosomal RNA small subunit methyltransferas...   534   e-149

>ref|XP_002266112.1| PREDICTED: ribosomal RNA small subunit methyltransferase B [Vitis
            vinifera] gi|296089930|emb|CBI39749.3| unnamed protein
            product [Vitis vinifera]
          Length = 525

 Score =  558 bits (1439), Expect = e-157
 Identities = 273/358 (76%), Positives = 315/358 (87%)
 Frame = -2

Query: 1379 PYAVVDENVRLAKVALRPGAGNMVNGILRKLVLLKERDSIPSAEVDGDDRQQARALATIY 1200
            PYAVVDENVRLAKVALRPGAGNMVN ILRKLVLLKE++S+P  +++GDDR QARALAT+Y
Sbjct: 167  PYAVVDENVRLAKVALRPGAGNMVNAILRKLVLLKEKNSLPLPKLEGDDRAQARALATLY 226

Query: 1199 SHPVWMVRRWIKLLGHEGATRLMMWNNKDPSFCLRANIAKGFRRSDLVKQLEKLKVPHEL 1020
            SHPVWMVRRW K LG E A +LMMWNN +PSF LRAN  KGF R+DLV +L+ LKVPHEL
Sbjct: 227  SHPVWMVRRWTKYLGQEEAIKLMMWNNSEPSFSLRANSGKGFTRADLVMRLKMLKVPHEL 286

Query: 1019 SAHLDQFVRINTGLQIIKQAGLLKDGLCSVQDESAGMVVSLVDPQPGENILDCCAAPGGK 840
            S HLD FVRI TG+QI+ QA LLK+GLCSVQDESAG+VVS+VDPQPGE+I+DCCAAPGGK
Sbjct: 287  SPHLDNFVRIRTGMQIVIQAQLLKEGLCSVQDESAGLVVSVVDPQPGESIIDCCAAPGGK 346

Query: 839  TLFLATYLNGQGMVTAVDVNIGRLRILKETAKLHQVHNVVTTVHSDLRIFAKNSHVKHDK 660
            T+F+A+ L+GQGMV A+D+N GRLRI+KETAKL  V +V+TTVH+DL  FAKN+ VK DK
Sbjct: 347  TIFMASCLSGQGMVHAIDINKGRLRIVKETAKLLLVDDVITTVHADLCTFAKNNPVKSDK 406

Query: 659  VLLDAPCSGLGVLSKRADLRWNRRLEDMEELKSLQDELLDSAAMLVKPDGVLIYSTCSID 480
            VLLDAPCSGLGVLSKRADLRWNR LEDME+LK+LQDELLD+AA+LVKP GVL+YSTCSID
Sbjct: 407  VLLDAPCSGLGVLSKRADLRWNRSLEDMEQLKNLQDELLDAAAILVKPGGVLVYSTCSID 466

Query: 479  PEENEERIASFLLRRPEFVVDSADRYVPHEFVTRNGFYLSNPVKHSMDGAFAARLIRS 306
            PEENEER+A+FL R PEF +D   RYVP +FVT  GFY SNPVKH++DGAFAARL+RS
Sbjct: 467  PEENEERVAAFLQRHPEFSIDPVGRYVPSDFVTEGGFYFSNPVKHALDGAFAARLVRS 524


>ref|XP_002300381.1| predicted protein [Populus trichocarpa] gi|222847639|gb|EEE85186.1|
            predicted protein [Populus trichocarpa]
          Length = 527

 Score =  552 bits (1423), Expect = e-155
 Identities = 267/357 (74%), Positives = 314/357 (87%)
 Frame = -2

Query: 1376 YAVVDENVRLAKVALRPGAGNMVNGILRKLVLLKERDSIPSAEVDGDDRQQARALATIYS 1197
            YAVVDENVRLAKV+LRPGAGNMVNGILRKLVLLKE +S+P  +++GDDR QARALAT+YS
Sbjct: 170  YAVVDENVRLAKVSLRPGAGNMVNGILRKLVLLKESNSLPLPKLEGDDRAQARALATLYS 229

Query: 1196 HPVWMVRRWIKLLGHEGATRLMMWNNKDPSFCLRANIAKGFRRSDLVKQLEKLKVPHELS 1017
            HPVWMVRRW KLLG E A +LMMWNN +PSF LRAN  KG  R+DLV Q   LKVPHELS
Sbjct: 230  HPVWMVRRWTKLLGQEKAIKLMMWNNDNPSFSLRANSGKGVTRADLVMQFNMLKVPHELS 289

Query: 1016 AHLDQFVRINTGLQIIKQAGLLKDGLCSVQDESAGMVVSLVDPQPGENILDCCAAPGGKT 837
             HLD FVR+ TGLQI+ QAGLLK GLC+VQDESAG++VS+V+PQPG++I+DCCAAPGGKT
Sbjct: 290  LHLDHFVRVKTGLQIVIQAGLLKQGLCAVQDESAGLIVSVVNPQPGDSIIDCCAAPGGKT 349

Query: 836  LFLATYLNGQGMVTAVDVNIGRLRILKETAKLHQVHNVVTTVHSDLRIFAKNSHVKHDKV 657
            L++A+ ++GQGM+ A+D+N GRLRI+KETAKLHQV  V+TT+ SDLR FA++  +K DKV
Sbjct: 350  LYMASQMHGQGMLYAIDINKGRLRIVKETAKLHQVDGVITTIPSDLRTFAESYQLKSDKV 409

Query: 656  LLDAPCSGLGVLSKRADLRWNRRLEDMEELKSLQDELLDSAAMLVKPDGVLIYSTCSIDP 477
            LLDAPCSGLGVLSKRADLRWNRRLED+EELK LQ+ELLD+A++LVKP GVL+YSTCSIDP
Sbjct: 410  LLDAPCSGLGVLSKRADLRWNRRLEDLEELKKLQEELLDAASILVKPGGVLVYSTCSIDP 469

Query: 476  EENEERIASFLLRRPEFVVDSADRYVPHEFVTRNGFYLSNPVKHSMDGAFAARLIRS 306
            EENEER+ +FLLR PEF +D  DRYVP +FVT+ GFY S+PVKHSMDGAFAARLIR+
Sbjct: 470  EENEERVDAFLLRHPEFRIDPVDRYVPPDFVTKRGFYSSDPVKHSMDGAFAARLIRT 526


>ref|XP_003519634.1| PREDICTED: ribosomal RNA small subunit methyltransferase B-like
            [Glycine max]
          Length = 528

 Score =  542 bits (1396), Expect = e-152
 Identities = 261/357 (73%), Positives = 307/357 (85%)
 Frame = -2

Query: 1379 PYAVVDENVRLAKVALRPGAGNMVNGILRKLVLLKERDSIPSAEVDGDDRQQARALATIY 1200
            PYAVVDENV+LAK ALRPGAGNMVNGILRKLV+LKE++S+P  +V+GDDR QARALAT+Y
Sbjct: 170  PYAVVDENVKLAKFALRPGAGNMVNGILRKLVVLKEKESLPLPKVEGDDRAQARALATLY 229

Query: 1199 SHPVWMVRRWIKLLGHEGATRLMMWNNKDPSFCLRANIAKGFRRSDLVKQLEKLKVPHEL 1020
            SHPVWMVRRW K LG E A +LM+WNN +PSF LRAN A+GF R DLV QL  LKVPH+L
Sbjct: 230  SHPVWMVRRWTKYLGQEEAIKLMIWNNSEPSFSLRANRARGFSRDDLVTQLNALKVPHKL 289

Query: 1019 SAHLDQFVRINTGLQIIKQAGLLKDGLCSVQDESAGMVVSLVDPQPGENILDCCAAPGGK 840
            S HLD+FVRI TGLQII QAGLLK GLCSVQDESAG+VVS+VDPQPGE I+DCCAAPGGK
Sbjct: 290  SPHLDEFVRIKTGLQIIIQAGLLKKGLCSVQDESAGLVVSVVDPQPGETIIDCCAAPGGK 349

Query: 839  TLFLATYLNGQGMVTAVDVNIGRLRILKETAKLHQVHNVVTTVHSDLRIFAKNSHVKHDK 660
            TL++A++L+GQG V A+DVN GRLRILKETAKLHQV  V+T +H+DLR    +  +K +K
Sbjct: 350  TLYMASHLSGQGKVFAIDVNSGRLRILKETAKLHQVDGVITAIHADLRTLPDSGQLKSNK 409

Query: 659  VLLDAPCSGLGVLSKRADLRWNRRLEDMEELKSLQDELLDSAAMLVKPDGVLIYSTCSID 480
            VLLDAPCSGLGVLSKRADLRWN+ LEDME+LK LQDELLD+A+ LVKP GVL+YSTCSID
Sbjct: 410  VLLDAPCSGLGVLSKRADLRWNKNLEDMEQLKELQDELLDAASKLVKPGGVLVYSTCSID 469

Query: 479  PEENEERIASFLLRRPEFVVDSADRYVPHEFVTRNGFYLSNPVKHSMDGAFAARLIR 309
            PEEN++R+ +FL R  +F +D  DRYVP +F T +GF+ SNPVKHS+DG+FAARL+R
Sbjct: 470  PEENDDRVVAFLARHSDFHIDPVDRYVPPDFETSSGFFFSNPVKHSLDGSFAARLVR 526


>ref|XP_003617839.1| Ribosomal RNA small subunit methyltransferase [Medicago truncatula]
            gi|355519174|gb|AET00798.1| Ribosomal RNA small subunit
            methyltransferase [Medicago truncatula]
          Length = 654

 Score =  539 bits (1388), Expect = e-151
 Identities = 262/355 (73%), Positives = 304/355 (85%)
 Frame = -2

Query: 1379 PYAVVDENVRLAKVALRPGAGNMVNGILRKLVLLKERDSIPSAEVDGDDRQQARALATIY 1200
            PYAVVDENV+LAK ALRPGAGNMVNG+LRKLV+LKE +++P  +V+GDDR QARALAT+Y
Sbjct: 171  PYAVVDENVQLAKAALRPGAGNMVNGVLRKLVVLKENETLPLPKVEGDDRSQARALATLY 230

Query: 1199 SHPVWMVRRWIKLLGHEGATRLMMWNNKDPSFCLRANIAKGFRRSDLVKQLEKLKVPHEL 1020
            SHPVW+VRRW K LG E A +LM+WNN +PS+ LRAN AKGF R DLV +L  LKVPH+L
Sbjct: 231  SHPVWIVRRWTKYLGQEEAIKLMIWNNIEPSYSLRANRAKGFSRDDLVTELNALKVPHKL 290

Query: 1019 SAHLDQFVRINTGLQIIKQAGLLKDGLCSVQDESAGMVVSLVDPQPGENILDCCAAPGGK 840
            S HLD FVRI TGLQII  AGL K+GLCSVQDESAG++VS+VDPQPGE I+DCCAAPGGK
Sbjct: 291  SLHLDDFVRIKTGLQIIIHAGLFKEGLCSVQDESAGLIVSIVDPQPGETIVDCCAAPGGK 350

Query: 839  TLFLATYLNGQGMVTAVDVNIGRLRILKETAKLHQVHNVVTTVHSDLRIFAKNSHVKHDK 660
            TL++A +L+GQGMV AVDVN GRLRILKETAKLHQV  VVTTVH+DLR       +K +K
Sbjct: 351  TLYMAAHLSGQGMVYAVDVNSGRLRILKETAKLHQVDGVVTTVHADLRTLTDGEPLKSNK 410

Query: 659  VLLDAPCSGLGVLSKRADLRWNRRLEDMEELKSLQDELLDSAAMLVKPDGVLIYSTCSID 480
            VLLDAPCSGLGVLSKRADLRWNR+LEDME+LK LQDELLD+A+ LVKP GVL+YSTCSID
Sbjct: 411  VLLDAPCSGLGVLSKRADLRWNRKLEDMEQLKKLQDELLDAASTLVKPGGVLVYSTCSID 470

Query: 479  PEENEERIASFLLRRPEFVVDSADRYVPHEFVTRNGFYLSNPVKHSMDGAFAARL 315
            PEEN++R+A+FL R  +F +D  DRYVP +FVT  GFY SNPVKHS+DG+FAARL
Sbjct: 471  PEENDDRVAAFLERHADFHIDPVDRYVPPDFVTPKGFYSSNPVKHSLDGSFAARL 525


>ref|XP_002522772.1| ribosomal RNA small subunit methyltransferase B, putative [Ricinus
            communis] gi|223538010|gb|EEF39623.1| ribosomal RNA small
            subunit methyltransferase B, putative [Ricinus communis]
          Length = 527

 Score =  534 bits (1375), Expect = e-149
 Identities = 259/358 (72%), Positives = 307/358 (85%)
 Frame = -2

Query: 1379 PYAVVDENVRLAKVALRPGAGNMVNGILRKLVLLKERDSIPSAEVDGDDRQQARALATIY 1200
            PYAVVDENVRLAKVALRPGAGNMVNGILRKLVLLKE +S+P  +++GD R QARALAT++
Sbjct: 169  PYAVVDENVRLAKVALRPGAGNMVNGILRKLVLLKENNSLPLPKLEGDARAQARALATLH 228

Query: 1199 SHPVWMVRRWIKLLGHEGATRLMMWNNKDPSFCLRANIAKGFRRSDLVKQLEKLKVPHEL 1020
            SHPVWMVRRW K LG E A RLM+WNN DPSF LRAN  KG  R DLV +L  LKVP+EL
Sbjct: 229  SHPVWMVRRWTKYLGQEEAIRLMIWNNSDPSFSLRANGGKGVTRDDLVTRLNLLKVPYEL 288

Query: 1019 SAHLDQFVRINTGLQIIKQAGLLKDGLCSVQDESAGMVVSLVDPQPGENILDCCAAPGGK 840
            S + D FVR+ TGLQI+ QAGLLK+G CSVQDESAG+VVS+V+PQPG++I+DCCAAPGGK
Sbjct: 289  SPYSDHFVRMRTGLQIVLQAGLLKEGFCSVQDESAGLVVSIVNPQPGDSIIDCCAAPGGK 348

Query: 839  TLFLATYLNGQGMVTAVDVNIGRLRILKETAKLHQVHNVVTTVHSDLRIFAKNSHVKHDK 660
            T+++A+ + GQGMV A+D+N GRLRIL+ETAKLHQ+  V+T V SDLR+ A+N  +K DK
Sbjct: 349  TVYMASLMEGQGMVYAIDINKGRLRILQETAKLHQIDGVITAVPSDLRVLAENYPMKSDK 408

Query: 659  VLLDAPCSGLGVLSKRADLRWNRRLEDMEELKSLQDELLDSAAMLVKPDGVLIYSTCSID 480
            VLLDAPCSGLGVLSKRADLRWNRR+ED+EELK+LQDELLD+A+ LVKP G L+YSTCSID
Sbjct: 409  VLLDAPCSGLGVLSKRADLRWNRRVEDLEELKNLQDELLDAASTLVKPGGFLVYSTCSID 468

Query: 479  PEENEERIASFLLRRPEFVVDSADRYVPHEFVTRNGFYLSNPVKHSMDGAFAARLIRS 306
            PEENEER+ +FLLR PEF +D  DRYVP + VT  GFY S+PVKHS+DGAFAARL+++
Sbjct: 469  PEENEERVDAFLLRHPEFQIDPVDRYVPPDLVTERGFYSSSPVKHSIDGAFAARLVKA 526


Top