BLASTX nr result
ID: Cephaelis21_contig00008161
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00008161
(1942 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002878070.1| hypothetical protein ARALYDRAFT_486056 [Arab... 146 2e-64
ref|NP_191174.1| translation initiation factor eIF-3 subunit 8 [... 146 3e-63
gb|AAC83464.1| eIF3c [Arabidopsis thaliana] 144 4e-61
ref|XP_002281426.1| PREDICTED: eukaryotic translation initiation... 160 1e-55
emb|CAN81874.1| hypothetical protein VITISV_038366 [Vitis vinifera] 133 1e-47
>ref|XP_002878070.1| hypothetical protein ARALYDRAFT_486056 [Arabidopsis lyrata subsp.
lyrata] gi|297323908|gb|EFH54329.1| hypothetical protein
ARALYDRAFT_486056 [Arabidopsis lyrata subsp. lyrata]
Length = 888
Score = 146 bits (368), Expect(6) = 2e-64
Identities = 90/179 (50%), Positives = 110/179 (61%), Gaps = 8/179 (4%)
Frame = +3
Query: 36 KGTGRIELVEQLTFLTRVAKTPTEKLEILFSAVYAQFDVNPSLNTDMPINAWKSCV---- 203
KGT R ELV+QLT LT++AKTP +KLEILFS + AQFDVNP L+ MPIN WK CV
Sbjct: 241 KGTARFELVDQLTHLTKIAKTPAQKLEILFSVISAQFDVNPGLSGHMPINVWKKCVLNML 300
Query: 204 ---DILTQHPNIVVDDDMVEPNEND*TK-RKKEQILRTXXXXXXXXXXXXKEYTWNSLRA 371
DIL ++ NIVV DD VEP+EN+ +K + +R E+ + SL+
Sbjct: 301 TILDILVKYNNIVV-DDTVEPDENETSKPADYDGKIRVWGNLVAFLERIDTEF-FKSLQC 358
Query: 372 CKLLIHTPVTCEYIERLREEVMLAVLSQNIQEYLESAGDNMGAAKVALERVELICYKVQ 548
P T EY+ERLR+E M L+QNIQ+Y E GD AAKVAL RVE I YK Q
Sbjct: 359 I-----DPHTREYVERLRDEPMFLALAQNIQDYFERMGDFKAAAKVALRRVEAIYYKPQ 412
Score = 55.1 bits (131), Expect(6) = 2e-64
Identities = 26/36 (72%), Positives = 28/36 (77%)
Frame = +3
Query: 876 IYKSGDELTKARAMLCDICHHALRDEFSTSFQLLLM 983
IY+ GDE TKARAMLCDI HHAL D F T+ LLLM
Sbjct: 475 IYRDGDERTKARAMLCDINHHALMDNFGTARDLLLM 510
Score = 53.5 bits (127), Expect(6) = 2e-64
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +1
Query: 1048 QLGLCAFRVGLIAEGHSCLSEPYSAGRVKALLAR 1149
QLGLCAFRVG+I E HSCLSE YS RV+ LLA+
Sbjct: 534 QLGLCAFRVGMITESHSCLSELYSGQRVRELLAQ 567
Score = 39.7 bits (91), Expect(6) = 2e-64
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 971 VIVNASQDNIHHMDISTQILFNRAMDNL 1054
++++ QDNI HMDISTQILFNR M L
Sbjct: 508 LLMSHLQDNIQHMDISTQILFNRTMAQL 535
Score = 37.4 bits (85), Expect(6) = 2e-64
Identities = 27/73 (36%), Positives = 34/73 (46%)
Frame = +1
Query: 535 ATKYKPQEVYGAMRKLAEQSGSAEGEMDSGEEPRVGEGXXXXXXXXXXXXXXXXXHLSRE 714
A YKPQEVY AMRKLAE E E ++ EE + G
Sbjct: 406 AIYYKPQEVYDAMRKLAELVEEEEEEEET-EEAKEESGPPTSFIVVPEVVPRKPTFPESS 464
Query: 715 Q*LMDMLVSVIVR 753
+ +MD+LVS+I R
Sbjct: 465 RAMMDILVSLIYR 477
Score = 24.6 bits (52), Expect(6) = 2e-64
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +1
Query: 1 NKKFKEIAAVRGRE 42
NKKFKEI A RG++
Sbjct: 228 NKKFKEIVASRGKK 241
>ref|NP_191174.1| translation initiation factor eIF-3 subunit 8 [Arabidopsis
thaliana] gi|334186011|ref|NP_001190102.1| translation
initiation factor eIF-3 subunit 8 [Arabidopsis thaliana]
gi|23503063|sp|O49160.2|EIF3C_ARATH RecName:
Full=Eukaryotic translation initiation factor 3 subunit
C; Short=eIF3c; AltName: Full=Eukaryotic translation
initiation factor 3 subunit 8; AltName: Full=eIF3 p110;
AltName: Full=p105 gi|7572913|emb|CAB87414.1| PROBABLE
EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 8
[Arabidopsis thaliana] gi|17381100|gb|AAL36362.1|
putative eukaryotic translation initiation factor 3
subunit 8 [Arabidopsis thaliana]
gi|25054977|gb|AAN71960.1| putative eukaryotic
translation initiation factor 3 subunit 8 [Arabidopsis
thaliana] gi|332645965|gb|AEE79486.1| translation
initiation factor eIF-3 subunit 8 [Arabidopsis thaliana]
gi|332645966|gb|AEE79487.1| translation initiation
factor eIF-3 subunit 8 [Arabidopsis thaliana]
Length = 900
Score = 146 bits (369), Expect(6) = 3e-63
Identities = 90/179 (50%), Positives = 110/179 (61%), Gaps = 8/179 (4%)
Frame = +3
Query: 36 KGTGRIELVEQLTFLTRVAKTPTEKLEILFSAVYAQFDVNPSLNTDMPINAWKSCV---- 203
KGT R ELV+QLT LT++AKTP +KLEILFS + AQFDVNP L+ MPIN WK CV
Sbjct: 256 KGTARFELVDQLTHLTKIAKTPAQKLEILFSVISAQFDVNPGLSGHMPINVWKKCVLNML 315
Query: 204 ---DILTQHPNIVVDDDMVEPNEND*TK-RKKEQILRTXXXXXXXXXXXXKEYTWNSLRA 371
DIL ++ NIVV DD VEP+EN+ +K + +R E+ + SL+
Sbjct: 316 TILDILVKYSNIVV-DDTVEPDENETSKPTDYDGKIRVWGNLVAFLERVDTEF-FKSLQC 373
Query: 372 CKLLIHTPVTCEYIERLREEVMLAVLSQNIQEYLESAGDNMGAAKVALERVELICYKVQ 548
P T EY+ERLR+E M L+QNIQ+Y E GD AAKVAL RVE I YK Q
Sbjct: 374 I-----DPHTREYVERLRDEPMFLALAQNIQDYFERMGDFKAAAKVALRRVEAIYYKPQ 427
Score = 54.7 bits (130), Expect(6) = 3e-63
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +3
Query: 876 IYKSGDELTKARAMLCDICHHALRDEFSTSFQLLLM 983
IY++GDE TKARAMLCDI HHAL D F T+ LLLM
Sbjct: 487 IYRNGDERTKARAMLCDINHHALMDNFVTARDLLLM 522
Score = 52.0 bits (123), Expect(6) = 3e-63
Identities = 24/34 (70%), Positives = 27/34 (79%)
Frame = +1
Query: 1048 QLGLCAFRVGLIAEGHSCLSEPYSAGRVKALLAR 1149
QLGLCAFR G+I E HSCLSE YS RV+ LLA+
Sbjct: 546 QLGLCAFRAGMITESHSCLSELYSGQRVRELLAQ 579
Score = 39.7 bits (91), Expect(6) = 3e-63
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 971 VIVNASQDNIHHMDISTQILFNRAMDNL 1054
++++ QDNI HMDISTQILFNR M L
Sbjct: 520 LLMSHLQDNIQHMDISTQILFNRTMAQL 547
Score = 34.7 bits (78), Expect(6) = 3e-63
Identities = 26/73 (35%), Positives = 32/73 (43%)
Frame = +1
Query: 535 ATKYKPQEVYGAMRKLAEQSGSAEGEMDSGEEPRVGEGXXXXXXXXXXXXXXXXXHLSRE 714
A YKPQEVY AMRKLAE E + EE + G
Sbjct: 421 AIYYKPQEVYDAMRKLAE----LVEEEEETEEAKEESGPPTSFIVVPEVVPRKPTFPESS 476
Query: 715 Q*LMDMLVSVIVR 753
+ +MD+LVS+I R
Sbjct: 477 RAMMDILVSLIYR 489
Score = 25.4 bits (54), Expect(6) = 3e-63
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +1
Query: 1 NKKFKEIAAVRGRE 42
NKKFKEI A RG++
Sbjct: 243 NKKFKEIVAARGKK 256
>gb|AAC83464.1| eIF3c [Arabidopsis thaliana]
Length = 900
Score = 144 bits (364), Expect(6) = 4e-61
Identities = 89/179 (49%), Positives = 109/179 (60%), Gaps = 8/179 (4%)
Frame = +3
Query: 36 KGTGRIELVEQLTFLTRVAKTPTEKLEILFSAVYAQFDVNPSLNTDMPINAWKSCV---- 203
KGT R ELV+QLT LT++A TP +KLEILFS + AQFDVNP L+ MPIN WK CV
Sbjct: 256 KGTARFELVDQLTHLTKIANTPAQKLEILFSVISAQFDVNPGLSGHMPINVWKKCVLNML 315
Query: 204 ---DILTQHPNIVVDDDMVEPNEND*TK-RKKEQILRTXXXXXXXXXXXXKEYTWNSLRA 371
DIL ++ NIVV DD VEP+EN+ +K + +R E+ + SL+
Sbjct: 316 TILDILVKYSNIVV-DDTVEPDENETSKPTDYDGKIRVWGNLVAFLERVDTEF-FKSLQC 373
Query: 372 CKLLIHTPVTCEYIERLREEVMLAVLSQNIQEYLESAGDNMGAAKVALERVELICYKVQ 548
P T EY+ERLR+E M L+QNIQ+Y E GD AAKVAL RVE I YK Q
Sbjct: 374 I-----DPHTREYVERLRDEPMFLALAQNIQDYFERMGDFKAAAKVALRRVEAIYYKPQ 427
Score = 54.7 bits (130), Expect(6) = 4e-61
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +3
Query: 876 IYKSGDELTKARAMLCDICHHALRDEFSTSFQLLLM 983
IY++GDE TKARAMLCDI HHAL D F T+ LLLM
Sbjct: 487 IYRNGDERTKARAMLCDINHHALMDNFVTARDLLLM 522
Score = 49.7 bits (117), Expect(6) = 4e-61
Identities = 23/34 (67%), Positives = 26/34 (76%)
Frame = +1
Query: 1048 QLGLCAFRVGLIAEGHSCLSEPYSAGRVKALLAR 1149
QLGLCAFR G+I E HSCLSE Y RV+ LLA+
Sbjct: 546 QLGLCAFRAGMITESHSCLSELYFGQRVRELLAQ 579
Score = 39.7 bits (91), Expect(6) = 4e-61
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 971 VIVNASQDNIHHMDISTQILFNRAMDNL 1054
++++ QDNI HMDISTQILFNR M L
Sbjct: 520 LLMSHLQDNIQHMDISTQILFNRTMAQL 547
Score = 34.7 bits (78), Expect(6) = 4e-61
Identities = 26/73 (35%), Positives = 32/73 (43%)
Frame = +1
Query: 535 ATKYKPQEVYGAMRKLAEQSGSAEGEMDSGEEPRVGEGXXXXXXXXXXXXXXXXXHLSRE 714
A YKPQEVY AMRKLAE E + EE + G
Sbjct: 421 AIYYKPQEVYDAMRKLAE----LVEEEEETEEAKEESGPPTSFIVVPEVVPRKPTFPESS 476
Query: 715 Q*LMDMLVSVIVR 753
+ +MD+LVS+I R
Sbjct: 477 RAMMDILVSLIYR 489
Score = 22.3 bits (46), Expect(6) = 4e-61
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1
Query: 1 NKKFKEIAAVRGRE 42
NKKFKEI A R ++
Sbjct: 243 NKKFKEIVAAREKK 256
>ref|XP_002281426.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
C-like [Vitis vinifera]
Length = 946
Score = 160 bits (405), Expect(3) = 1e-55
Identities = 98/179 (54%), Positives = 115/179 (64%), Gaps = 8/179 (4%)
Frame = +3
Query: 36 KGTGRIELVEQLTFLTRVAKTPTEKLEILFSAVYAQFDVNPSLNTDMPINAWKSCV---- 203
KGTGRIE VEQLTFLTRVAKTP +KLEILFS V AQFDVNPSL+ MPIN WK CV
Sbjct: 271 KGTGRIEQVEQLTFLTRVAKTPAQKLEILFSVVSAQFDVNPSLSGHMPINVWKKCVQNML 330
Query: 204 ---DILTQHPNIVVDDDMVEPNEND*TK-RKKEQILRTXXXXXXXXXXXXKEYTWNSLRA 371
DIL QH NI+V DD+VEP EN+ K + +R E+ + SL+
Sbjct: 331 VILDILVQHSNILV-DDVVEPEENETQKGADYKGTIRVWGNLVAFLERIDVEF-FKSLQC 388
Query: 372 CKLLIHTPVTCEYIERLREEVMLAVLSQNIQEYLESAGDNMGAAKVALERVELICYKVQ 548
P T EY+ERLR+E + VL+QN+Q+YLE GD A+KVAL RVELI YK Q
Sbjct: 389 I-----DPHTREYVERLRDEPLFLVLAQNVQDYLERVGDFKAASKVALRRVELIYYKPQ 442
Score = 76.6 bits (187), Expect(3) = 1e-55
Identities = 72/204 (35%), Positives = 91/204 (44%), Gaps = 2/204 (0%)
Frame = +1
Query: 544 YKPQEVYGAMRKLAEQSGSAE-GEMDSGEEPRVGEGXXXXXXXXXXXXXXXXXHL-SREQ 717
YKPQEVY AM+ LAEQ+ E GE ++GEEPRV E +
Sbjct: 439 YKPQEVYDAMKNLAEQTEDTENGESEAGEEPRVEESRGPPAFVVTPEVVPRKPTFPENSR 498
Query: 718 *LMDMLVSVIVRKHNPKLIKYSHQVSYI*SWGTDLY*TNWFYIESPLQVI*QAYTSLVMN 897
LMD+LVS+I H + K + I Y + L A L+M+
Sbjct: 499 TLMDILVSLIY-NHGDERTKARAMLCDI-------------YHHAILDEFSTARDLLLMS 544
Query: 898 *LRPVQCFVTSATML*GMNFRHLSSYC*CVAG*YSSHGHFDSDIIQ*SHGQLGLCAFRVG 1077
L+ N +H+ S+ F+ + Q LGLCAFRVG
Sbjct: 545 HLQD--------------NVQHMD---------ISTQILFNRAMAQ-----LGLCAFRVG 576
Query: 1078 LIAEGHSCLSEPYSAGRVKALLAR 1149
LIAEGH CLSE YS GRVK LLA+
Sbjct: 577 LIAEGHGCLSELYSGGRVKELLAQ 600
Score = 29.3 bits (64), Expect(3) = 1e-55
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +1
Query: 1 NKKFKEIAAVRGREREG 51
NKKFKEI AVRGR+ G
Sbjct: 258 NKKFKEIVAVRGRKGTG 274
>emb|CAN81874.1| hypothetical protein VITISV_038366 [Vitis vinifera]
Length = 1047
Score = 133 bits (334), Expect(3) = 1e-47
Identities = 88/172 (51%), Positives = 104/172 (60%), Gaps = 1/172 (0%)
Frame = +3
Query: 36 KGTGRIELVEQLTFLTRVAKTPTEKLEILFSAVYAQFDVNPSLNTDMPINAWKSCVDILT 215
KGTGRIE VEQLTFLTRVAKTP +KLEILFS V AQFDVNPSL W
Sbjct: 271 KGTGRIEQVEQLTFLTRVAKTPAQKLEILFSVVSAQFDVNPSLE-------WAHANKF-- 321
Query: 216 QHPNIVVDDDMVEPNEND*TK-RKKEQILRTXXXXXXXXXXXXKEYTWNSLRACKLLIHT 392
QH NI+V DD+VEP EN+ K + +R E+ + SL+
Sbjct: 322 QHSNILV-DDVVEPEENETQKGADYKGTIRVWGNLVAFLERIDVEF-FKSLQCI-----D 374
Query: 393 PVTCEYIERLREEVMLAVLSQNIQEYLESAGDNMGAAKVALERVELICYKVQ 548
P T EY+ERLR+E + VL+QN+Q+YLE GD A+KVAL RVELI YK Q
Sbjct: 375 PHTREYVERLRDEPLFLVLAQNVQDYLERVGDFKAASKVALRRVELIYYKPQ 426
Score = 76.6 bits (187), Expect(3) = 1e-47
Identities = 72/204 (35%), Positives = 91/204 (44%), Gaps = 2/204 (0%)
Frame = +1
Query: 544 YKPQEVYGAMRKLAEQSGSAE-GEMDSGEEPRVGEGXXXXXXXXXXXXXXXXXHL-SREQ 717
YKPQEVY AM+ LAEQ+ E GE ++GEEPRV E +
Sbjct: 423 YKPQEVYDAMKNLAEQTEDTENGESEAGEEPRVEESRGPPAFVVTPEVVPRKPTFPENSR 482
Query: 718 *LMDMLVSVIVRKHNPKLIKYSHQVSYI*SWGTDLY*TNWFYIESPLQVI*QAYTSLVMN 897
LMD+LVS+I H + K + I Y + L A L+M+
Sbjct: 483 TLMDILVSLIY-NHGDERTKARAMLCDI-------------YHHAILDEFSTARDLLLMS 528
Query: 898 *LRPVQCFVTSATML*GMNFRHLSSYC*CVAG*YSSHGHFDSDIIQ*SHGQLGLCAFRVG 1077
L+ N +H+ S+ F+ + Q LGLCAFRVG
Sbjct: 529 HLQD--------------NVQHMD---------ISTQILFNRAMAQ-----LGLCAFRVG 560
Query: 1078 LIAEGHSCLSEPYSAGRVKALLAR 1149
LIAEGH CLSE YS GRVK LLA+
Sbjct: 561 LIAEGHGCLSELYSGGRVKELLAQ 584
Score = 29.3 bits (64), Expect(3) = 1e-47
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +1
Query: 1 NKKFKEIAAVRGREREG 51
NKKFKEI AVRGR+ G
Sbjct: 258 NKKFKEIVAVRGRKGTG 274