BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00008146
         (699 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid...   186   5e-59
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta...   190   5e-59
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...   181   8e-59
dbj|BAF01759.1| putative non-LTR retroelement reverse transcript...   181   8e-59
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...   185   2e-58

>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
           gi|7267666|emb|CAB78094.1| RNA-directed DNA
           polymerase-like protein [Arabidopsis thaliana]
          Length = 1274

 Score =  186 bits (471), Expect(2) = 5e-59
 Identities = 89/178 (50%), Positives = 123/178 (69%)
 Frame = +1

Query: 7   YWNVVGNDICVAIKDFFGSSCMLKSVNHTLISLIPKVKNPTSIAHYRPISLCNVIYKIIS 186
           YW+++  D+   I+ FF  SC+   +N T ++LIPK+  P  ++ YRPI+LCNV YKI++
Sbjct: 400 YWDIIEADVSRDIRSFFVDSCLSPRLNETHVTLIPKISAPRKVSDYRPIALCNVQYKIVA 459

Query: 187 KLLAERLKFCLPKCISECQSAFIKGRQILDNVIIAHECIHQLNNMRKGKEWYMAIKLDMS 366
           K+L  RL+  L + IS  QSAF+ GR I DNV+I HE +H L      K   MAIK DMS
Sbjct: 460 KILTRRLQPWLSELISLHQSAFVPGRAIADNVLITHEILHFLRVSGAKKYCSMAIKTDMS 519

Query: 367 KAYDRVEWGFLEQVMCRMGFDPIFVGWVMKCVTTASFSFNINGNACGYVIPSRGIRQG 540
           KAYDR++W FL++V+ R+GF   ++ WVM+CV T S+SF ING+  G V+PSRG+RQG
Sbjct: 520 KAYDRIKWNFLQEVLMRLGFHDKWIRWVMQCVCTVSYSFLINGSPQGSVVPSRGLRQG 577



 Score = 68.6 bits (166), Expect(2) = 5e-59
 Identities = 28/59 (47%), Positives = 43/59 (72%)
 Frame = +3

Query: 522 QGYKAGDPLSPYLFLICSEVFTHLINRASCAGRFQGLKVSKHGPSISHLLFADDSLVFC 698
           +G + GDPLSPYLF++C+EV + L  +A   G   G++V++  P ++HLLFADD++ FC
Sbjct: 572 RGLRQGDPLSPYLFILCTEVLSGLCRKAQEKGVMVGIRVARGSPQVNHLLFADDTMFFC 630


>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1229

 Score =  190 bits (483), Expect(2) = 5e-59
 Identities = 90/178 (50%), Positives = 123/178 (69%)
 Frame = +1

Query: 7   YWNVVGNDICVAIKDFFGSSCMLKSVNHTLISLIPKVKNPTSIAHYRPISLCNVIYKIIS 186
           YW+++  D+   I+ FF S    + +N T I LIPK   P  +A YRPI+LCN+ YKI++
Sbjct: 354 YWHIISTDVGREIRLFFTSKNFPRRMNETHIRLIPKDLGPRKVADYRPIALCNIFYKIVA 413

Query: 187 KLLAERLKFCLPKCISECQSAFIKGRQILDNVIIAHECIHQLNNMRKGKEWYMAIKLDMS 366
           K++ +R++  LPK ISE QSAF+ GR I DNV+I HE +H L      K   MA+K DMS
Sbjct: 414 KIMTKRMQLILPKLISENQSAFVPGRVISDNVLITHEVLHFLRTSSAKKHCSMAVKTDMS 473

Query: 367 KAYDRVEWGFLEQVMCRMGFDPIFVGWVMKCVTTASFSFNINGNACGYVIPSRGIRQG 540
           KAYDRVEW FL++V+ R GF  I++ WV++CVT+ S+SF ING   G V+P+RG+RQG
Sbjct: 474 KAYDRVEWDFLKKVLQRFGFHSIWIDWVLECVTSVSYSFLINGTPQGKVVPTRGLRQG 531



 Score = 63.9 bits (154), Expect(2) = 5e-59
 Identities = 28/58 (48%), Positives = 42/58 (72%)
 Frame = +3

Query: 522 QGYKAGDPLSPYLFLICSEVFTHLINRASCAGRFQGLKVSKHGPSISHLLFADDSLVF 695
           +G + GDPLSP LF++C+EV + L  RA    +  G++VS +GP ++HLLFADD++ F
Sbjct: 526 RGLRQGDPLSPCLFILCTEVLSGLCTRAQRLRQLPGVRVSINGPRVNHLLFADDTMFF 583


>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1225

 Score =  181 bits (460), Expect(2) = 8e-59
 Identities = 88/180 (48%), Positives = 121/180 (67%)
 Frame = +1

Query: 1   QQYWNVVGNDICVAIKDFFGSSCMLKSVNHTLISLIPKVKNPTSIAHYRPISLCNVIYKI 180
           Q YW++ G D+   +++F  +    + +N T I LIPK + P  +A +RPISLCNV YK+
Sbjct: 404 QHYWDLTGPDLIKLVQNFHSTGFFDERLNETNICLIPKTERPRKMAEFRPISLCNVSYKV 463

Query: 181 ISKLLAERLKFCLPKCISECQSAFIKGRQILDNVIIAHECIHQLNNMRKGKEWYMAIKLD 360
           ISK+L+ RLK  LP+ ISE QSAF+  R I DN++IA E  H L      K+ YMAIK D
Sbjct: 464 ISKVLSSRLKRLLPELISETQSAFVAERLITDNILIAQENFHALRTNPACKKKYMAIKTD 523

Query: 361 MSKAYDRVEWGFLEQVMCRMGFDPIFVGWVMKCVTTASFSFNINGNACGYVIPSRGIRQG 540
           MSKAYDRVEW FL  +M +MGF   +V W++ C+++ S+   +NG+  G++ PSRGIRQG
Sbjct: 524 MSKAYDRVEWSFLRALMLKMGFAQKWVDWIIFCISSVSYKILLNGSPKGFIKPSRGIRQG 583



 Score = 72.0 bits (175), Expect(2) = 8e-59
 Identities = 31/59 (52%), Positives = 42/59 (71%)
 Frame = +3

Query: 522 QGYKAGDPLSPYLFLICSEVFTHLINRASCAGRFQGLKVSKHGPSISHLLFADDSLVFC 698
           +G + GDP+SP+LF++C+E     +  A   GR QGL++S+  PS SHLLFADDSL FC
Sbjct: 578 RGIRQGDPISPFLFILCTEALVAKLKDAEWHGRIQGLQISRASPSTSHLLFADDSLFFC 636


>dbj|BAF01759.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 400

 Score =  181 bits (460), Expect(2) = 8e-59
 Identities = 88/180 (48%), Positives = 121/180 (67%)
 Frame = +1

Query: 1   QQYWNVVGNDICVAIKDFFGSSCMLKSVNHTLISLIPKVKNPTSIAHYRPISLCNVIYKI 180
           Q YW++ G D+   +++F  +    + +N T I LIPK + P  +A +RPISLCNV YK+
Sbjct: 38  QHYWDLTGPDLIKLVQNFHSTGFFDERLNETNICLIPKTERPRKMAEFRPISLCNVSYKV 97

Query: 181 ISKLLAERLKFCLPKCISECQSAFIKGRQILDNVIIAHECIHQLNNMRKGKEWYMAIKLD 360
           ISK+L+ RLK  LP+ ISE QSAF+  R I DN++IA E  H L      K+ YMAIK D
Sbjct: 98  ISKVLSSRLKRLLPELISETQSAFVAERLITDNILIAQENFHALRTNPACKKKYMAIKTD 157

Query: 361 MSKAYDRVEWGFLEQVMCRMGFDPIFVGWVMKCVTTASFSFNINGNACGYVIPSRGIRQG 540
           MSKAYDRVEW FL  +M +MGF   +V W++ C+++ S+   +NG+  G++ PSRGIRQG
Sbjct: 158 MSKAYDRVEWSFLRALMLKMGFAQKWVDWIIFCISSVSYKILLNGSPKGFIKPSRGIRQG 217



 Score = 72.0 bits (175), Expect(2) = 8e-59
 Identities = 31/59 (52%), Positives = 42/59 (71%)
 Frame = +3

Query: 522 QGYKAGDPLSPYLFLICSEVFTHLINRASCAGRFQGLKVSKHGPSISHLLFADDSLVFC 698
           +G + GDP+SP+LF++C+E     +  A   GR QGL++S+  PS SHLLFADDSL FC
Sbjct: 212 RGIRQGDPISPFLFILCTEALVAKLKDAEWHGRIQGLQISRASPSTSHLLFADDSLFFC 270


>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
           (fragment)
          Length = 1365

 Score =  185 bits (470), Expect(2) = 2e-58
 Identities = 90/180 (50%), Positives = 124/180 (68%)
 Frame = +1

Query: 1   QQYWNVVGNDICVAIKDFFGSSCMLKSVNHTLISLIPKVKNPTSIAHYRPISLCNVIYKI 180
           QQ+W++V + I   I  FF +  + +  NHT I LIPK+ +P  ++  RPISLC+V+YKI
Sbjct: 456 QQHWDLVKHQILTEIFGFFETGVLPQDWNHTHICLIPKITSPQRMSDLRPISLCSVLYKI 515

Query: 181 ISKLLAERLKFCLPKCISECQSAFIKGRQILDNVIIAHECIHQLNNMRKGKEWYMAIKLD 360
           ISK+L +RLK  LP  +S  QSAF+  R I DN+++AHE IH L    +  + +MA K D
Sbjct: 516 ISKILTQRLKKHLPAIVSTTQSAFVPQRLISDNILVAHEMIHSLRTNDRISKEHMAFKTD 575

Query: 361 MSKAYDRVEWGFLEQVMCRMGFDPIFVGWVMKCVTTASFSFNINGNACGYVIPSRGIRQG 540
           MSKAYDRVEW FLE +M  +GF+  ++ W+M CVT+ S+S  ING   G++IP+RGIRQG
Sbjct: 576 MSKAYDRVEWPFLETMMTALGFNNKWISWIMNCVTSVSYSVLINGQPYGHIIPTRGIRQG 635



 Score = 66.6 bits (161), Expect(2) = 2e-58
 Identities = 27/59 (45%), Positives = 42/59 (71%)
 Frame = +3

Query: 522 QGYKAGDPLSPYLFLICSEVFTHLINRASCAGRFQGLKVSKHGPSISHLLFADDSLVFC 698
           +G + GDPLSP LF++C+E   H++N+A  AG+  G++      S++HLLFADD+L+ C
Sbjct: 630 RGIRQGDPLSPALFVLCTEALIHILNKAEQAGKITGIQFQDKKVSVNHLLFADDTLLMC 688