BLASTX nr result
ID: Cephaelis21_contig00008049
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cephaelis21_contig00008049 (588 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABA81852.1| unknown [Solanum tuberosum] 84 1e-17 dbj|BAC41937.1| putative tubulin beta-1 chain [Arabidopsis thali... 86 2e-17 ref|XP_002282157.1| PREDICTED: tubulin beta-2 chain [Vitis vinif... 86 2e-17 emb|CAN64745.1| hypothetical protein VITISV_041322 [Vitis vinifera] 86 2e-17 gb|AAD02498.1| beta tubulin 1 [Arabidopsis thaliana] 86 3e-17 >gb|ABA81852.1| unknown [Solanum tuberosum] Length = 448 Score = 84.3 bits (207), Expect(2) = 1e-17 Identities = 42/56 (75%), Positives = 48/56 (85%) Frame = +3 Query: 246 LTQ*MGDAKNMMCAIDPRRHGGYLTASSMLRGKMSTKEVDKQIINVHNKNNSYIVK 413 LTQ M DAKNMMCA DPR HG YLTAS+M RGKMSTKEVD+Q++NV NKN+SY V+ Sbjct: 289 LTQQMWDAKNMMCAADPR-HGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVE 343 Score = 30.8 bits (68), Expect(2) = 1e-17 Identities = 15/24 (62%), Positives = 17/24 (70%) Frame = +1 Query: 430 TFVRN*TLIQEMFRIVSEPCLGIF 501 TF+ N T IQEMFR VSEP +F Sbjct: 366 TFIGNSTSIQEMFRRVSEPFTAMF 389 >dbj|BAC41937.1| putative tubulin beta-1 chain [Arabidopsis thaliana] gi|28951025|gb|AAO63436.1| At1g75780 [Arabidopsis thaliana] Length = 447 Score = 85.5 bits (210), Expect(2) = 2e-17 Identities = 43/56 (76%), Positives = 48/56 (85%) Frame = +3 Query: 246 LTQ*MGDAKNMMCAIDPRRHGGYLTASSMLRGKMSTKEVDKQIINVHNKNNSYIVK 413 LTQ M DAKNMMCA DPR HG YLTAS+M RGKMSTKEVD+QI+NV NKN+SY V+ Sbjct: 290 LTQQMWDAKNMMCAADPR-HGRYLTASAMFRGKMSTKEVDEQILNVQNKNSSYFVE 344 Score = 28.5 bits (62), Expect(2) = 2e-17 Identities = 15/24 (62%), Positives = 16/24 (66%) Frame = +1 Query: 430 TFVRN*TLIQEMFRIVSEPCLGIF 501 TFV N T IQEMFR VSE +F Sbjct: 367 TFVGNSTSIQEMFRRVSEQSTAMF 390 >ref|XP_002282157.1| PREDICTED: tubulin beta-2 chain [Vitis vinifera] Length = 445 Score = 86.3 bits (212), Expect(2) = 2e-17 Identities = 44/56 (78%), Positives = 48/56 (85%) Frame = +3 Query: 246 LTQ*MGDAKNMMCAIDPRRHGGYLTASSMLRGKMSTKEVDKQIINVHNKNNSYIVK 413 LTQ M DAKNMMCA DPR HG YLTAS+M RGKMSTKEVD+QIINV NKN+SY V+ Sbjct: 289 LTQQMWDAKNMMCAADPR-HGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVE 343 Score = 27.7 bits (60), Expect(2) = 2e-17 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = +1 Query: 430 TFVRN*TLIQEMFRIVSEPCLGIF 501 TF+ N T IQEMFR VSE +F Sbjct: 366 TFIGNSTSIQEMFRRVSEQFTAMF 389 >emb|CAN64745.1| hypothetical protein VITISV_041322 [Vitis vinifera] Length = 445 Score = 86.3 bits (212), Expect(2) = 2e-17 Identities = 44/56 (78%), Positives = 48/56 (85%) Frame = +3 Query: 246 LTQ*MGDAKNMMCAIDPRRHGGYLTASSMLRGKMSTKEVDKQIINVHNKNNSYIVK 413 LTQ M DAKNMMCA DPR HG YLTAS+M RGKMSTKEVD+QIINV NKN+SY V+ Sbjct: 289 LTQQMWDAKNMMCAADPR-HGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVE 343 Score = 27.7 bits (60), Expect(2) = 2e-17 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = +1 Query: 430 TFVRN*TLIQEMFRIVSEPCLGIF 501 TF+ N T IQEMFR VSE +F Sbjct: 366 TFIGNSTSIQEMFRRVSEQFTAMF 389 >gb|AAD02498.1| beta tubulin 1 [Arabidopsis thaliana] Length = 448 Score = 85.5 bits (210), Expect(2) = 3e-17 Identities = 43/56 (76%), Positives = 48/56 (85%) Frame = +3 Query: 246 LTQ*MGDAKNMMCAIDPRRHGGYLTASSMLRGKMSTKEVDKQIINVHNKNNSYIVK 413 LTQ M DAKNMMCA DPR HG YLTAS+M RGKMSTKEVD+QI+NV NKN+SY V+ Sbjct: 291 LTQQMWDAKNMMCAADPR-HGRYLTASAMFRGKMSTKEVDEQILNVQNKNSSYFVE 345 Score = 28.1 bits (61), Expect(2) = 3e-17 Identities = 15/24 (62%), Positives = 16/24 (66%) Frame = +1 Query: 430 TFVRN*TLIQEMFRIVSEPCLGIF 501 TFV N T IQEMFR VSE +F Sbjct: 368 TFVGNSTSIQEMFRRVSEQFTAMF 391