BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00006824
         (1084 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA90282.1| U1snRNP-specific protein, U1A [Solanum tuberosum]     389   e-106
ref|XP_002270967.1| PREDICTED: U1 small nuclear ribonucleoprotei...   374   e-101
gb|ABK94716.1| unknown [Populus trichocarpa]                          371   e-100
ref|XP_004156835.1| PREDICTED: U1 small nuclear ribonucleoprotei...   369   e-100
emb|CBI36876.3| unnamed protein product [Vitis vinifera]              368   1e-99

>emb|CAA90282.1| U1snRNP-specific protein, U1A [Solanum tuberosum]
          Length = 253

 Score =  389 bits (999), Expect = e-106
 Identities = 187/241 (77%), Positives = 210/241 (87%)
 Frame = -3

Query: 962 ATAGTDIPQNQTIYINNLNEKIKLDELKKSLHAVFCQFGSILEVLAFKTLKHKGQAWVVF 783
           A +G + P N TIYINNLNEKIKL+ELKKS+HAVF QFG ILEVLAFKTLKHKGQAWVVF
Sbjct: 13  APSGGETPPNVTIYINNLNEKIKLEELKKSMHAVFSQFGKILEVLAFKTLKHKGQAWVVF 72

Query: 782 DDVSSAANAFRQMQGFPFYDKPMRIQYAKTKSDIIAKADGTFLPREKRKKQDERGRKKKE 603
           ++VSSA+NA RQMQGFPFYDKPMRIQYAKTKSD++AKADGTF+PREKRK+ +++GRKKK+
Sbjct: 73  EEVSSASNALRQMQGFPFYDKPMRIQYAKTKSDVVAKADGTFVPREKRKRHEDKGRKKKD 132

Query: 602 QHDANQAGIGLNPAYAGPYGTTPPLSQLPYMAGVKTXXXXXXXXXXXILFVQNLPHQTTS 423
           Q D+NQAG+GLNPAYAG YG  PP SQ+PYM G K            ILFVQNLPHQ+T 
Sbjct: 133 QQDSNQAGMGLNPAYAGAYGAAPPFSQIPYMGGAKAAVPEAPAPPNSILFVQNLPHQSTP 192

Query: 422 MMLQMLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSTVAMQGLQGFKITAENPMLVTYAK 243
           MMLQMLFCQYPGFKEVRM+EAKPGIAF+EY +EMQSTVAMQ LQGFKITAENPML+TYAK
Sbjct: 193 MMLQMLFCQYPGFKEVRMIEAKPGIAFIEYGDEMQSTVAMQALQGFKITAENPMLITYAK 252

Query: 242 K 240
           K
Sbjct: 253 K 253


>ref|XP_002270967.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Vitis vinifera]
          Length = 245

 Score =  374 bits (959), Expect = e-101
 Identities = 181/239 (75%), Positives = 204/239 (85%), Gaps = 1/239 (0%)
 Frame = -3

Query: 953 GTDIPQNQTIYINNLNEKIKLDELKKSLHAVFCQFGSILEVLAFKTLKHKGQAWVVFDDV 774
           G +I  N TIYINNLNEKIKL+ELKKSL AVF QFG I+EVLAFKTLKHKGQAWVVF++V
Sbjct: 7   GGEISPNMTIYINNLNEKIKLEELKKSLFAVFSQFGKIMEVLAFKTLKHKGQAWVVFEEV 66

Query: 773 SSAANAFRQMQGFPFYDKPMRIQYAKTKSDIIAKADGTFLPREKRKKQDER-GRKKKEQH 597
           SSA NA RQMQGFPFYDKPMRIQYAKTKSD+IAKADGTF+PRE+R++ D+R GRK++EQH
Sbjct: 67  SSATNALRQMQGFPFYDKPMRIQYAKTKSDVIAKADGTFVPRERRRRHDDRAGRKRREQH 126

Query: 596 DANQAGIGLNPAYAGPYGTTPPLSQLPYMAGVKTXXXXXXXXXXXILFVQNLPHQTTSMM 417
           DANQAG+G+NPAY G YG  PPLSQ+PY+ G K+           ILF+QNLPH+ T MM
Sbjct: 127 DANQAGVGVNPAYGGAYGAAPPLSQIPYLGGAKSAVPEAPAPPNNILFIQNLPHEATPMM 186

Query: 416 LQMLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSTVAMQGLQGFKITAENPMLVTYAKK 240
           LQM FCQYPGFKEVRMVEAKPGIAFVEY +EMQSTVAMQGLQG KI  +NPML+TYAKK
Sbjct: 187 LQMFFCQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGLKINQQNPMLITYAKK 245


>gb|ABK94716.1| unknown [Populus trichocarpa]
          Length = 254

 Score =  371 bits (952), Expect = e-100
 Identities = 180/240 (75%), Positives = 203/240 (84%)
 Frame = -3

Query: 959 TAGTDIPQNQTIYINNLNEKIKLDELKKSLHAVFCQFGSILEVLAFKTLKHKGQAWVVFD 780
           + GTD+ QN TIYINNLNEKIK+DELK SLHAVF QFG ILE+LAFKTLKHKGQAWV+F+
Sbjct: 15  STGTDVSQNMTIYINNLNEKIKIDELKTSLHAVFSQFGKILEILAFKTLKHKGQAWVIFE 74

Query: 779 DVSSAANAFRQMQGFPFYDKPMRIQYAKTKSDIIAKADGTFLPREKRKKQDERGRKKKEQ 600
           DV SA+NA RQMQ FPFYDKPMRIQYAKTKSDIIAKADGTF+PREKR++ +E+G+KKK+Q
Sbjct: 75  DVQSASNAIRQMQSFPFYDKPMRIQYAKTKSDIIAKADGTFVPREKRRRHEEKGKKKKDQ 134

Query: 599 HDANQAGIGLNPAYAGPYGTTPPLSQLPYMAGVKTXXXXXXXXXXXILFVQNLPHQTTSM 420
           HDANQ G+GL PAY G YGTTP L Q+PY  GVK+           ILF+QNLP++TT M
Sbjct: 135 HDANQVGVGLTPAYGGAYGTTPSLLQIPYPGGVKSMVPEAPAPPNNILFIQNLPNETTPM 194

Query: 419 MLQMLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSTVAMQGLQGFKITAENPMLVTYAKK 240
           MLQMLF QYPGFKEVRMVEAKPGIAFVEY +EMQST AM GLQGFKI  +N ML+TYAKK
Sbjct: 195 MLQMLFQQYPGFKEVRMVEAKPGIAFVEYGDEMQSTGAMHGLQGFKILQQNSMLITYAKK 254


>ref|XP_004156835.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cucumis
           sativus]
          Length = 242

 Score =  369 bits (946), Expect = e-100
 Identities = 187/248 (75%), Positives = 210/248 (84%)
 Frame = -3

Query: 983 MADLTVTATAGTDIPQNQTIYINNLNEKIKLDELKKSLHAVFCQFGSILEVLAFKTLKHK 804
           MA++T T   G ++P N TIYINNLNEKIKL+ELKKSL+AVF QFG ILEVLAFKTLKHK
Sbjct: 1   MAEVTTT---GNEVPPNMTIYINNLNEKIKLEELKKSLNAVFSQFGKILEVLAFKTLKHK 57

Query: 803 GQAWVVFDDVSSAANAFRQMQGFPFYDKPMRIQYAKTKSDIIAKADGTFLPREKRKKQDE 624
           GQAWVVF++VSSA NA RQMQGFPFYDKPMRIQYAKTKSDIIAK+DG+F+PREKRK+ +E
Sbjct: 58  GQAWVVFEEVSSATNALRQMQGFPFYDKPMRIQYAKTKSDIIAKSDGSFVPREKRKRHEE 117

Query: 623 RGRKKKEQHDANQAGIGLNPAYAGPYGTTPPLSQLPYMAGVKTXXXXXXXXXXXILFVQN 444
           +GRKKKEQHDANQAG+GLNPA+AG YG T   SQ+PY  GV             ILFVQN
Sbjct: 118 KGRKKKEQHDANQAGMGLNPAFAGAYGATAH-SQVPYSGGVMV--PEAPAPPNSILFVQN 174

Query: 443 LPHQTTSMMLQMLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSTVAMQGLQGFKITAENP 264
           LPH+TT MMLQMLFCQYPGFKEVRMVEAKPGIAFVEY +E+QSTVAMQ LQGFK+  +N 
Sbjct: 175 LPHETTPMMLQMLFCQYPGFKEVRMVEAKPGIAFVEYSDEVQSTVAMQALQGFKMNPQNS 234

Query: 263 MLVTYAKK 240
           ML+TYAKK
Sbjct: 235 MLITYAKK 242


>emb|CBI36876.3| unnamed protein product [Vitis vinifera]
          Length = 232

 Score =  368 bits (945), Expect = 1e-99
 Identities = 178/231 (77%), Positives = 200/231 (86%), Gaps = 1/231 (0%)
 Frame = -3

Query: 929 TIYINNLNEKIKLDELKKSLHAVFCQFGSILEVLAFKTLKHKGQAWVVFDDVSSAANAFR 750
           TIYINNLNEKIKL+ELKKSL AVF QFG I+EVLAFKTLKHKGQAWVVF++VSSA NA R
Sbjct: 2   TIYINNLNEKIKLEELKKSLFAVFSQFGKIMEVLAFKTLKHKGQAWVVFEEVSSATNALR 61

Query: 749 QMQGFPFYDKPMRIQYAKTKSDIIAKADGTFLPREKRKKQDER-GRKKKEQHDANQAGIG 573
           QMQGFPFYDKPMRIQYAKTKSD+IAKADGTF+PRE+R++ D+R GRK++EQHDANQAG+G
Sbjct: 62  QMQGFPFYDKPMRIQYAKTKSDVIAKADGTFVPRERRRRHDDRAGRKRREQHDANQAGVG 121

Query: 572 LNPAYAGPYGTTPPLSQLPYMAGVKTXXXXXXXXXXXILFVQNLPHQTTSMMLQMLFCQY 393
           +NPAY G YG  PPLSQ+PY+ G K+           ILF+QNLPH+ T MMLQM FCQY
Sbjct: 122 VNPAYGGAYGAAPPLSQIPYLGGAKSAVPEAPAPPNNILFIQNLPHEATPMMLQMFFCQY 181

Query: 392 PGFKEVRMVEAKPGIAFVEYENEMQSTVAMQGLQGFKITAENPMLVTYAKK 240
           PGFKEVRMVEAKPGIAFVEY +EMQSTVAMQGLQG KI  +NPML+TYAKK
Sbjct: 182 PGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGLKINQQNPMLITYAKK 232