BLASTX nr result

ID: Cephaelis21_contig00006763 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00006763
         (1058 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263648.1| PREDICTED: DNA-directed RNA polymerase III s...   135   2e-29
emb|CAN72759.1| hypothetical protein VITISV_004802 [Vitis vinifera]   125   2e-26
gb|AFK37258.1| unknown [Lotus japonicus]                              120   6e-25
gb|AFK40316.1| unknown [Lotus japonicus]                              115   2e-23
ref|XP_003552972.1| PREDICTED: DNA-directed RNA polymerase III s...   115   2e-23

>ref|XP_002263648.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC9 [Vitis
           vinifera] gi|296087853|emb|CBI35109.3| unnamed protein
           product [Vitis vinifera]
          Length = 156

 Score =  135 bits (340), Expect = 2e-29
 Identities = 76/169 (44%), Positives = 99/169 (58%)
 Frame = -2

Query: 841 MKILEAYAGALTNFEVLDFLRTRGAGKDPTRLIASVAPSEYMVYDYLEQTTASTQTREIM 662
           MKI +A AGALTNFEVLDFLR+RGA KDPTR+IA +A SE+ VYDYL ++ A  QTRE +
Sbjct: 1   MKIKKANAGALTNFEVLDFLRSRGAAKDPTRVIAPIAASEFKVYDYLVESAACNQTRESI 60

Query: 661 NEFMKQSTKYDXXXXXXXXXXXIRPSSEVEXXXXXXXXXXXXXXXXXXXXRPSSEVEIDP 482
           NE +++  KYD               +E+                     RP+S VEIDP
Sbjct: 61  NELLEKCKKYDL------------AKAEI---------------LNIINIRPASPVEIDP 93

Query: 481 IIEDCENRFGENREKLVETVVQMLPPPPTEMEHDDGIGVDKGETSDGHQ 335
           IIE+ E R GE  E L+E V+ +LPPPP +M  ++ +     E +DG Q
Sbjct: 94  IIEESEKRMGEGIEDLIEMVITVLPPPPNQMNTEEEVVAGDEEIADGEQ 142


>emb|CAN72759.1| hypothetical protein VITISV_004802 [Vitis vinifera]
          Length = 388

 Score =  125 bits (313), Expect = 2e-26
 Identities = 70/157 (44%), Positives = 93/157 (59%)
 Frame = -2

Query: 829 EAYAGALTNFEVLDFLRTRGAGKDPTRLIASVAPSEYMVYDYLEQTTASTQTREIMNEFM 650
           +A AGALTNFEVLDFLR+RGA KD TR+IA +A SE+ VYDYL ++ A  QTRE +NE +
Sbjct: 26  KANAGALTNFEVLDFLRSRGAAKDXTRVIAPIAASEFKVYDYLVESAACNQTRESINELL 85

Query: 649 KQSTKYDXXXXXXXXXXXIRPSSEVEXXXXXXXXXXXXXXXXXXXXRPSSEVEIDPIIED 470
           ++  KYD               +E+                     RP+S VEIDPIIE+
Sbjct: 86  EKCKKYDL------------AKAEI---------------LNIINIRPASPVEIDPIIEE 118

Query: 469 CENRFGENREKLVETVVQMLPPPPTEMEHDDGIGVDK 359
            E R GE  E L+E V+ +LPPPP +M  ++ + +DK
Sbjct: 119 SEKRMGEGIEDLIEMVITVLPPPPNQMNTEEEVIMDK 155


>gb|AFK37258.1| unknown [Lotus japonicus]
          Length = 162

 Score =  120 bits (301), Expect = 6e-25
 Identities = 78/187 (41%), Positives = 99/187 (52%), Gaps = 16/187 (8%)
 Frame = -2

Query: 841 MKILEAYAGALTNFEVLDFLRTRGAGKDPTRLIASVAPSEYMVYDYLEQTTASTQTREIM 662
           MKILEA AGALTNFEVLDFLR +GA KDPTR+IA VA SEY VYDYL  T AS QTRE +
Sbjct: 1   MKILEANAGALTNFEVLDFLRGKGASKDPTRVIAKVAQSEYKVYDYLVNTAASNQTRESI 60

Query: 661 NEFMKQSTKYDXXXXXXXXXXXIRPSSEVEXXXXXXXXXXXXXXXXXXXXRPSSEVEIDP 482
           NEFM    K+D               +EV                     RP++ VE+ P
Sbjct: 61  NEFMASVKKHDL------------AKAEV---------------LNIINIRPAAAVEMFP 93

Query: 481 IIEDCENRF-GENREKLVETVVQMLPPPPTE---------------MEHDDGIGVDKGET 350
           IIE+CE+RF  E   ++VE V + LP PP +               +EH++   + + + 
Sbjct: 94  IIEECESRFPDEEVTEIVELVKKTLPAPPAKKNVVENPEGNEETATLEHENDTKMSEDQN 153

Query: 349 SDGHQKE 329
             G Q +
Sbjct: 154 EGGEQMD 160


>gb|AFK40316.1| unknown [Lotus japonicus]
          Length = 162

 Score =  115 bits (288), Expect = 2e-23
 Identities = 76/187 (40%), Positives = 96/187 (51%), Gaps = 16/187 (8%)
 Frame = -2

Query: 841 MKILEAYAGALTNFEVLDFLRTRGAGKDPTRLIASVAPSEYMVYDYLEQTTASTQTREIM 662
           MKILEA AGALTNFEVLDFLR +GA KDPTR+IA VA SEY VYDYL  T AS QTRE +
Sbjct: 1   MKILEANAGALTNFEVLDFLRGKGASKDPTRVIAKVAQSEYKVYDYLVNTAASNQTRESI 60

Query: 661 NEFMKQSTKYDXXXXXXXXXXXIRPSSEVEXXXXXXXXXXXXXXXXXXXXRPSSEVEIDP 482
           NEFM    K+D               +EV                      P++ VE+ P
Sbjct: 61  NEFMASVKKHDL------------AKAEV---------------LNIINITPAAAVEMFP 93

Query: 481 IIEDCENRF-GENREKLVETVVQMLPPPPTE---------------MEHDDGIGVDKGET 350
           IIE+CE RF  E   ++VE   + LP PP +               +EH++   + + + 
Sbjct: 94  IIEECEPRFPDEEVTEIVELAKKTLPAPPAKKNVVENPEGNEETATLEHENDTKMSEDQN 153

Query: 349 SDGHQKE 329
             G Q +
Sbjct: 154 EGGEQMD 160


>ref|XP_003552972.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc9-like
           [Glycine max]
          Length = 161

 Score =  115 bits (288), Expect = 2e-23
 Identities = 70/161 (43%), Positives = 89/161 (55%)
 Frame = -2

Query: 841 MKILEAYAGALTNFEVLDFLRTRGAGKDPTRLIASVAPSEYMVYDYLEQTTASTQTREIM 662
           MKILE  AGALTNFEVLDFLR +GA KDPTR+IA VA SEY VYDYL  T AS QTRE +
Sbjct: 1   MKILECNAGALTNFEVLDFLRAKGASKDPTRVIAKVAQSEYKVYDYLVDTAASVQTRESI 60

Query: 661 NEFMKQSTKYDXXXXXXXXXXXIRPSSEVEXXXXXXXXXXXXXXXXXXXXRPSSEVEIDP 482
           NEF+    ++D               +EV                      P++EVE+ P
Sbjct: 61  NEFLTSVKQHDL------------AKAEV---------------LNILNIGPAAEVELYP 93

Query: 481 IIEDCENRFGENREKLVETVVQMLPPPPTEMEHDDGIGVDK 359
           IIEDC+ RFG+     +  +V+   P P  M+ ++   VD+
Sbjct: 94  IIEDCDERFGDEGVLEIVELVKKTLPLPLNMKQEEITKVDE 134


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