BLASTX nr result

ID: Cephaelis21_contig00006723 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00006723
         (1544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA05170.1| RNA-binding glycine rich protein [Nicotiana sylv...   176   2e-41
gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]      174   6e-41
gb|AAL07519.1| RNA-binding protein precursor [Solanum tuberosum]      167   7e-39
emb|CBI15119.3| unnamed protein product [Vitis vinifera]              164   8e-38
ref|XP_002284026.1| PREDICTED: uncharacterized protein LOC100256...   164   8e-38

>dbj|BAA05170.1| RNA-binding glycine rich protein [Nicotiana sylvestris]
           gi|295393567|gb|ADG03639.1| RNA-binding glycine-rich
           protein [Nicotiana tabacum]
          Length = 259

 Score =  176 bits (445), Expect = 2e-41
 Identities = 87/122 (71%), Positives = 106/122 (86%), Gaps = 1/122 (0%)
 Frame = +2

Query: 257 MAFVNRIGNVLKQAMSKQINVEPCGSNSVLFQAIRSMST-RLFVGGLSYGTDDMSLSQAF 433
           MAFVN+IGN+LKQ +S+  N+E C S + L+QAIRSMS+ +LFVGGLS+GTD+ SL +AF
Sbjct: 1   MAFVNKIGNMLKQIVSRHANLELCASRTSLYQAIRSMSSSKLFVGGLSWGTDETSLKEAF 60

Query: 434 SQHGQVVEARVIIDRDNGRSRGFGFVTFASNEEAARAMQALDGQDLHGRRIRVNYATERP 613
           SQHG+V+EARVI+DRD GRSRGFGFV+F S EEAA A+ ALDGQDLHGR+IRVNYATE+ 
Sbjct: 61  SQHGEVIEARVIMDRDTGRSRGFGFVSFTSTEEAASALTALDGQDLHGRQIRVNYATEKL 120

Query: 614 RG 619
           RG
Sbjct: 121 RG 122


>gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]
          Length = 277

 Score =  174 bits (441), Expect = 6e-41
 Identities = 86/121 (71%), Positives = 106/121 (87%), Gaps = 1/121 (0%)
 Frame = +2

Query: 257 MAFVNRIGNVLKQAMSKQINVEPCGSNSVLFQAIRSMST-RLFVGGLSYGTDDMSLSQAF 433
           MAF NR+G++LKQ++SK  N+E   SN+ LFQAIRSMS+ +LFVGGLSYGTD+ SL +AF
Sbjct: 1   MAFFNRVGSILKQSVSKHSNLELSASNASLFQAIRSMSSSKLFVGGLSYGTDESSLKEAF 60

Query: 434 SQHGQVVEARVIIDRDNGRSRGFGFVTFASNEEAARAMQALDGQDLHGRRIRVNYATERP 613
           SQ+G V+EARVI+DRD GRSRGFGF++F S+EEAA A+QA+DGQDLHGRRIRVNYATE+ 
Sbjct: 61  SQYGDVIEARVIMDRDTGRSRGFGFISFPSSEEAASALQAMDGQDLHGRRIRVNYATEKR 120

Query: 614 R 616
           R
Sbjct: 121 R 121


>gb|AAL07519.1| RNA-binding protein precursor [Solanum tuberosum]
          Length = 339

 Score =  167 bits (423), Expect = 7e-39
 Identities = 81/121 (66%), Positives = 101/121 (83%), Gaps = 1/121 (0%)
 Frame = +2

Query: 257 MAFVNRIGNVLKQAMSKQINVEPCGSNSVLFQAIRSMST-RLFVGGLSYGTDDMSLSQAF 433
           MAF+N+IGN+LK  + K  N+E   SN  LFQ IRSMS+ +LFVGGLSYGTD+ SL + F
Sbjct: 1   MAFLNKIGNILKHGVGKNTNLELSASNGSLFQTIRSMSSSKLFVGGLSYGTDESSLKETF 60

Query: 434 SQHGQVVEARVIIDRDNGRSRGFGFVTFASNEEAARAMQALDGQDLHGRRIRVNYATERP 613
           SQ+G+V+EARVI+DR+ GRSRGFGF++F S+EEA  AMQA+DGQDLHGRRI+VNYATE+ 
Sbjct: 61  SQYGEVIEARVILDRETGRSRGFGFISFPSSEEATSAMQAMDGQDLHGRRIKVNYATEKR 120

Query: 614 R 616
           R
Sbjct: 121 R 121


>emb|CBI15119.3| unnamed protein product [Vitis vinifera]
          Length = 163

 Score =  164 bits (414), Expect = 8e-38
 Identities = 79/125 (63%), Positives = 103/125 (82%), Gaps = 1/125 (0%)
 Frame = +2

Query: 257 MAFVNRIGNVLKQAMSKQINVEPCGSNSVLFQAIRSMST-RLFVGGLSYGTDDMSLSQAF 433
           MAF  ++GN+L+Q +SKQ+N +   SN  ++QAIR MS+ +LF+GGLSY TDD SL +AF
Sbjct: 1   MAFFGKVGNILRQTVSKQVNSQFSVSNPSIYQAIRCMSSSKLFIGGLSYSTDDTSLREAF 60

Query: 434 SQHGQVVEARVIIDRDNGRSRGFGFVTFASNEEAARAMQALDGQDLHGRRIRVNYATERP 613
            ++G+V+EARVI+DR+ GRSRGFGFVTF S+EEA+ A+QALDGQDLHGRR+RVNYAT+R 
Sbjct: 61  HKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYATDRA 120

Query: 614 RGPRF 628
           R   F
Sbjct: 121 RSGGF 125


>ref|XP_002284026.1| PREDICTED: uncharacterized protein LOC100256940 [Vitis vinifera]
          Length = 277

 Score =  164 bits (414), Expect = 8e-38
 Identities = 79/125 (63%), Positives = 103/125 (82%), Gaps = 1/125 (0%)
 Frame = +2

Query: 257 MAFVNRIGNVLKQAMSKQINVEPCGSNSVLFQAIRSMST-RLFVGGLSYGTDDMSLSQAF 433
           MAF  ++GN+L+Q +SKQ+N +   SN  ++QAIR MS+ +LF+GGLSY TDD SL +AF
Sbjct: 1   MAFFGKVGNILRQTVSKQVNSQFSVSNPSIYQAIRCMSSSKLFIGGLSYSTDDTSLREAF 60

Query: 434 SQHGQVVEARVIIDRDNGRSRGFGFVTFASNEEAARAMQALDGQDLHGRRIRVNYATERP 613
            ++G+V+EARVI+DR+ GRSRGFGFVTF S+EEA+ A+QALDGQDLHGRR+RVNYAT+R 
Sbjct: 61  HKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYATDRA 120

Query: 614 RGPRF 628
           R   F
Sbjct: 121 RSGGF 125


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