BLASTX nr result

ID: Cephaelis21_contig00006678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00006678
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK23173.1| unknown [Picea sitchensis]                              98   8e-19
ref|XP_002510918.1| 40S ribosomal protein S13, putative [Ricinus...    97   1e-18
ref|XP_002509604.1| 40S ribosomal protein S13, putative [Ricinus...    97   1e-18
ref|XP_002280012.1| PREDICTED: 40S ribosomal protein S13 [Vitis ...    97   1e-18
ref|XP_004147576.1| PREDICTED: 40S ribosomal protein S13-like [C...    97   2e-18

>gb|ABK23173.1| unknown [Picea sitchensis]
          Length = 151

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 44/47 (93%), Positives = 47/47 (100%)
 Frame = -1

Query: 142 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKRGMTP 2
           MGRMHSRGKGIS+SALPYKRTPPSWLKISSQDVEDNICKFAK+G+TP
Sbjct: 1   MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEDNICKFAKKGLTP 47


>ref|XP_002510918.1| 40S ribosomal protein S13, putative [Ricinus communis]
           gi|223550033|gb|EEF51520.1| 40S ribosomal protein S13,
           putative [Ricinus communis]
          Length = 112

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 44/47 (93%), Positives = 47/47 (100%)
 Frame = -1

Query: 142 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKRGMTP 2
           MGRMHSRGKGISASALPYKRTPPSWLKISSQDVE+NICKFAK+G+TP
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTP 47


>ref|XP_002509604.1| 40S ribosomal protein S13, putative [Ricinus communis]
           gi|223549503|gb|EEF50991.1| 40S ribosomal protein S13,
           putative [Ricinus communis]
          Length = 82

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 44/47 (93%), Positives = 47/47 (100%)
 Frame = -1

Query: 142 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKRGMTP 2
           MGRMHSRGKGISASALPYKRTPPSWLKISSQDVE+NICKFAK+G+TP
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTP 47


>ref|XP_002280012.1| PREDICTED: 40S ribosomal protein S13 [Vitis vinifera]
           gi|147820740|emb|CAN69640.1| hypothetical protein
           VITISV_028568 [Vitis vinifera]
           gi|296089171|emb|CBI38874.3| unnamed protein product
           [Vitis vinifera]
          Length = 151

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 44/47 (93%), Positives = 47/47 (100%)
 Frame = -1

Query: 142 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKRGMTP 2
           MGRMHSRGKGIS+SALPYKRTPPSWLKISSQDVE+NICKFAK+GMTP
Sbjct: 1   MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGMTP 47


>ref|XP_004147576.1| PREDICTED: 40S ribosomal protein S13-like [Cucumis sativus]
           gi|449506113|ref|XP_004162657.1| PREDICTED: 40S
           ribosomal protein S13-like [Cucumis sativus]
          Length = 151

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 44/47 (93%), Positives = 46/47 (97%)
 Frame = -1

Query: 142 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKRGMTP 2
           MGRMHSRGKGISASALPYKRTPPSWLKISS DVEDNICKFAK+G+TP
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTP 47


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