BLASTX nr result

ID: Cephaelis21_contig00006666 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00006666
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containi...    73   3e-11
emb|CBI21289.3| unnamed protein product [Vitis vinifera]               73   3e-11
ref|XP_002300144.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
ref|XP_003624481.1| Pentatricopeptide repeat-containing protein ...    70   2e-10
ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [S...    69   3e-10

>ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Vitis vinifera]
          Length = 735

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 31/36 (86%), Positives = 34/36 (94%)
 Frame = +2

Query: 2   TTIRLISKIVEREIVVRDSKRFHHFRNGLCSCGDYW 109
           T I+ ISKIV+REIVVRDSKRFHHFR+GLCSCGDYW
Sbjct: 700 TAIKFISKIVDREIVVRDSKRFHHFRDGLCSCGDYW 735


>emb|CBI21289.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 31/36 (86%), Positives = 34/36 (94%)
 Frame = +2

Query: 2   TTIRLISKIVEREIVVRDSKRFHHFRNGLCSCGDYW 109
           T I+ ISKIV+REIVVRDSKRFHHFR+GLCSCGDYW
Sbjct: 546 TAIKFISKIVDREIVVRDSKRFHHFRDGLCSCGDYW 581


>ref|XP_002300144.1| predicted protein [Populus trichocarpa] gi|222847402|gb|EEE84949.1|
           predicted protein [Populus trichocarpa]
          Length = 666

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 29/36 (80%), Positives = 34/36 (94%)
 Frame = +2

Query: 2   TTIRLISKIVEREIVVRDSKRFHHFRNGLCSCGDYW 109
           T I+LISKIV REI+VRD+KRFHHF++GLCSCGDYW
Sbjct: 631 TVIKLISKIVSREIIVRDAKRFHHFKDGLCSCGDYW 666


>ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|87240699|gb|ABD32557.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355499496|gb|AES80699.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 672

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 29/34 (85%), Positives = 33/34 (97%)
 Frame = +2

Query: 8   IRLISKIVEREIVVRDSKRFHHFRNGLCSCGDYW 109
           I+LISKIV REIV+RDSKRFHHF++GLCSCGDYW
Sbjct: 639 IKLISKIVNREIVIRDSKRFHHFKDGLCSCGDYW 672


>ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
           gi|241922063|gb|EER95207.1| hypothetical protein
           SORBIDRAFT_01g041740 [Sorghum bicolor]
          Length = 635

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 29/36 (80%), Positives = 33/36 (91%)
 Frame = +2

Query: 2   TTIRLISKIVEREIVVRDSKRFHHFRNGLCSCGDYW 109
           TTI+LISKIV+REI+VRDS RFHHF+NG CSC DYW
Sbjct: 600 TTIKLISKIVQREIIVRDSNRFHHFKNGSCSCRDYW 635


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