BLASTX nr result

ID: Cephaelis21_contig00006626 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00006626
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK46555.1| unknown [Lotus japonicus]                              206   1e-51
ref|XP_004149719.1| PREDICTED: DNA-directed RNA polymerase II su...   205   4e-51
ref|XP_002285578.1| PREDICTED: DNA-directed RNA polymerase II su...   205   4e-51
ref|XP_002313254.1| predicted protein [Populus trichocarpa] gi|1...   204   5e-51
ref|NP_001240124.1| uncharacterized protein LOC100784219 [Glycin...   204   6e-51

>gb|AFK46555.1| unknown [Lotus japonicus]
          Length = 116

 Score =  206 bits (525), Expect = 1e-51
 Identities = 99/106 (93%), Positives = 103/106 (97%)
 Frame = +3

Query: 69  MNAPDRYERFVVPEGVKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPDVLFAG 248
           MNAPDRYERFVVPEG KKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDP+VLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPNVLFAG 60

Query: 249 YKLPHPLQYKILVRIHTTSQSSPMQAYNQAVNDLDKELDRLKNAFE 386
           YKLPHPLQYKI+VRIHT SQSSPMQAYNQ++NDLDKELD LKNAFE
Sbjct: 61  YKLPHPLQYKIIVRIHTASQSSPMQAYNQSINDLDKELDHLKNAFE 106


>ref|XP_004149719.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
           [Cucumis sativus] gi|449516703|ref|XP_004165386.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB11-like [Cucumis sativus]
          Length = 116

 Score =  205 bits (521), Expect = 4e-51
 Identities = 99/106 (93%), Positives = 103/106 (97%)
 Frame = +3

Query: 69  MNAPDRYERFVVPEGVKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPDVLFAG 248
           MNAPDRYERFVVPEG KKVSYERDTKIINAASFTIERE+HTIGNILRMQLHRD +VLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAG 60

Query: 249 YKLPHPLQYKILVRIHTTSQSSPMQAYNQAVNDLDKELDRLKNAFE 386
           YKLPHPLQYKI+VRIHTTSQSSPMQAYNQA+NDLDKELD LKNAFE
Sbjct: 61  YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNAFE 106


>ref|XP_002285578.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11 [Vitis
           vinifera] gi|296082163|emb|CBI21168.3| unnamed protein
           product [Vitis vinifera]
          Length = 116

 Score =  205 bits (521), Expect = 4e-51
 Identities = 98/106 (92%), Positives = 103/106 (97%)
 Frame = +3

Query: 69  MNAPDRYERFVVPEGVKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPDVLFAG 248
           MNAPDRYERFVVPEG KKVSYERDTKIINAASFT+EREDHTIGNILRMQLHRD +VLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTVEREDHTIGNILRMQLHRDENVLFAG 60

Query: 249 YKLPHPLQYKILVRIHTTSQSSPMQAYNQAVNDLDKELDRLKNAFE 386
           YKLPHPLQYKI++RIHTTSQSSPMQAYNQA+NDLDKELD LKNAFE
Sbjct: 61  YKLPHPLQYKIIIRIHTTSQSSPMQAYNQAINDLDKELDYLKNAFE 106


>ref|XP_002313254.1| predicted protein [Populus trichocarpa] gi|118484276|gb|ABK94017.1|
           unknown [Populus trichocarpa]
           gi|222849662|gb|EEE87209.1| predicted protein [Populus
           trichocarpa]
          Length = 116

 Score =  204 bits (520), Expect = 5e-51
 Identities = 98/106 (92%), Positives = 103/106 (97%)
 Frame = +3

Query: 69  MNAPDRYERFVVPEGVKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPDVLFAG 248
           MNAPDRYERFVVPEG KKVSYERDTKIINAASFT+EREDHTIGNILRMQLHRD +VLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTVEREDHTIGNILRMQLHRDDNVLFAG 60

Query: 249 YKLPHPLQYKILVRIHTTSQSSPMQAYNQAVNDLDKELDRLKNAFE 386
           YKLPHPL+YKI+VRIHTTSQSSPMQAYNQA+NDLDKELD LKNAFE
Sbjct: 61  YKLPHPLKYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNAFE 106


>ref|NP_001240124.1| uncharacterized protein LOC100784219 [Glycine max]
           gi|255626235|gb|ACU13462.1| unknown [Glycine max]
          Length = 116

 Score =  204 bits (519), Expect = 6e-51
 Identities = 98/106 (92%), Positives = 104/106 (98%)
 Frame = +3

Query: 69  MNAPDRYERFVVPEGVKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPDVLFAG 248
           MNAPDRYERFVVPEG KKVSYERDTKIINAASFTIERE+HTIGNILRMQLHRDP+VLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDPNVLFAG 60

Query: 249 YKLPHPLQYKILVRIHTTSQSSPMQAYNQAVNDLDKELDRLKNAFE 386
           YKLPHPLQYKI+VRIHTTSQSSPMQAYNQ+VNDLD+ELD LK+AFE
Sbjct: 61  YKLPHPLQYKIIVRIHTTSQSSPMQAYNQSVNDLDRELDHLKSAFE 106


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