BLASTX nr result

ID: Cephaelis21_contig00006569 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00006569
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531881.1| PREDICTED: E3 ubiquitin-protein ligase At3g0...   128   2e-28
gb|AFK44484.1| unknown [Medicago truncatula]                          127   1e-27
ref|XP_003621540.1| RING finger protein [Medicago truncatula] gi...   127   1e-27
gb|AFK43629.1| unknown [Lotus japonicus]                              126   2e-27
ref|XP_002525923.1| 60S ribosomal protein L7a, putative [Ricinus...   125   3e-27

>ref|XP_003531881.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Glycine max]
          Length = 227

 Score =  128 bits (321), Expect(2) = 2e-28
 Identities = 71/116 (61%), Positives = 87/116 (75%), Gaps = 8/116 (6%)
 Frame = +3

Query: 93  SLDNSLSDMYRSPPRPLPYDADPRYFRLQK---WSGLKKG-----EETKALRRIDVDEDS 248
           SLDNSLSDMYRSPPRPLPYDADPR+FR Q+    S  +KG     EE++ LR  DVD DS
Sbjct: 68  SLDNSLSDMYRSPPRPLPYDADPRFFRSQREGLVSRREKGSSHLNEESEPLRG-DVDADS 126

Query: 249 KSLSTGGKWNVCTGVEESKEYNSRTSLKLFAAKTTTGFAHIYFSFEDEDVCPTCLE 416
           +SL++GGKWN  T  + SKEY S++S++L +AK TTG   +Y S E+EDVCPTCLE
Sbjct: 127 ESLNSGGKWN-DTSEDGSKEYRSKSSVRLSSAKLTTGAGVVYSSSEEEDVCPTCLE 181



 Score = 22.3 bits (46), Expect(2) = 2e-28
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 31  REDQHAVVSSTHGAASLCS 87
           R + HA+ SS  GAAS+ S
Sbjct: 47  RGEVHAIPSSIQGAASMTS 65


>gb|AFK44484.1| unknown [Medicago truncatula]
          Length = 227

 Score =  127 bits (318), Expect = 1e-27
 Identities = 69/117 (58%), Positives = 87/117 (74%), Gaps = 9/117 (7%)
 Frame = +3

Query: 93  SLDNSLSDMYRSPPRPLPYDADPRYFRLQKWSGL----KKG-----EETKALRRIDVDED 245
           SLDNSL+++YRSPPRPLPYDADPR+FR Q   GL    +KG     EE++ LR +DVD D
Sbjct: 68  SLDNSLAEIYRSPPRPLPYDADPRHFRSQH-DGLVSRREKGSSHLNEESEPLR-VDVDVD 125

Query: 246 SKSLSTGGKWNVCTGVEESKEYNSRTSLKLFAAKTTTGFAHIYFSFEDEDVCPTCLE 416
            +SLS+ GKW   TG + SKEY S++S++L +AK TTG A +Y S E+EDVCPTCLE
Sbjct: 126 PESLSSSGKWKESTGKDGSKEYRSKSSVRLSSAKLTTGAALVYASSEEEDVCPTCLE 182


>ref|XP_003621540.1| RING finger protein [Medicago truncatula]
           gi|217073256|gb|ACJ84987.1| unknown [Medicago
           truncatula] gi|355496555|gb|AES77758.1| RING finger
           protein [Medicago truncatula]
          Length = 227

 Score =  127 bits (318), Expect = 1e-27
 Identities = 69/117 (58%), Positives = 87/117 (74%), Gaps = 9/117 (7%)
 Frame = +3

Query: 93  SLDNSLSDMYRSPPRPLPYDADPRYFRLQKWSGL----KKG-----EETKALRRIDVDED 245
           SLDNSL+++YRSPPRPLPYDADPR+FR Q   GL    +KG     EE++ LR +DVD D
Sbjct: 68  SLDNSLAEIYRSPPRPLPYDADPRHFRSQH-DGLVSRREKGSSHLNEESEPLR-VDVDVD 125

Query: 246 SKSLSTGGKWNVCTGVEESKEYNSRTSLKLFAAKTTTGFAHIYFSFEDEDVCPTCLE 416
            +SLS+ GKW   TG + SKEY S++S++L +AK TTG A +Y S E+EDVCPTCLE
Sbjct: 126 PESLSSSGKWKESTGKDGSKEYRSKSSVRLSSAKLTTGAALVYASSEEEDVCPTCLE 182


>gb|AFK43629.1| unknown [Lotus japonicus]
          Length = 229

 Score =  126 bits (316), Expect = 2e-27
 Identities = 66/116 (56%), Positives = 81/116 (69%), Gaps = 8/116 (6%)
 Frame = +3

Query: 93  SLDNSLSDMYRSPPRPLPYDADPRYFRLQK--------WSGLKKGEETKALRRIDVDEDS 248
           SLDNSLSD+YRSPPRPLPYDA+PRYFR Q+         S     EET+ LR  DV+ D 
Sbjct: 68  SLDNSLSDLYRSPPRPLPYDAEPRYFRSQRDGLVSRRDKSSSHSNEETEPLRS-DVEVDP 126

Query: 249 KSLSTGGKWNVCTGVEESKEYNSRTSLKLFAAKTTTGFAHIYFSFEDEDVCPTCLE 416
           +S ++G KWN C G + SKE  S+++LK+ +AK TTG   IY S E+EDVCPTCLE
Sbjct: 127 ESFNSGDKWNGCAGDDGSKECRSKSALKISSAKYTTGVGLIYASSEEEDVCPTCLE 182


>ref|XP_002525923.1| 60S ribosomal protein L7a, putative [Ricinus communis]
           gi|223534752|gb|EEF36443.1| 60S ribosomal protein L7a,
           putative [Ricinus communis]
          Length = 570

 Score =  125 bits (315), Expect = 3e-27
 Identities = 71/117 (60%), Positives = 81/117 (69%), Gaps = 9/117 (7%)
 Frame = +3

Query: 93  SLDNSLSDMYRSPPRPLPYDADPRYFRLQKWSGL----KKG-----EETKALRRIDVDED 245
           SLDNSLSDMYRSPPRPLPYDADPRYF LQ+  GL    +KG     EE++ LR  D   D
Sbjct: 68  SLDNSLSDMYRSPPRPLPYDADPRYFHLQR-DGLVSRREKGSSHSHEESEPLRS-DNHGD 125

Query: 246 SKSLSTGGKWNVCTGVEESKEYNSRTSLKLFAAKTTTGFAHIYFSFEDEDVCPTCLE 416
           S SLSTG KW      E SKE  +R+SLK  +AK+T G  ++Y S EDEDVCPTCLE
Sbjct: 126 SDSLSTGDKWTASGCEEGSKEQRARSSLKFLSAKSTVGIGYVYSSSEDEDVCPTCLE 182


Top