BLASTX nr result

ID: Cephaelis21_contig00006550 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00006550
         (777 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145109.1| PREDICTED: polyadenylate-binding protein RBP...   128   4e-54
ref|XP_004153241.1| PREDICTED: polyadenylate-binding protein RBP...   128   4e-54
ref|XP_002518499.1| nuclear acid binding protein, putative [Rici...   131   2e-53
ref|XP_003529629.1| PREDICTED: RNA-binding post-transcriptional ...   122   4e-53
ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP...   126   4e-52

>ref|XP_004145109.1| PREDICTED: polyadenylate-binding protein RBP45B-like [Cucumis
           sativus]
          Length = 404

 Score =  128 bits (322), Expect(2) = 4e-54
 Identities = 59/73 (80%), Positives = 64/73 (87%), Gaps = 1/73 (1%)
 Frame = +1

Query: 238 FVQFADRSCAEEALRMLNGTQLVGQNIRLSWGRSPSNKQPQAEANQW-AGGYYGYPSGYE 414
           FVQFADR+CAEEALR+LNGTQ+ GQNIRLSWGRSPSNKQPQA+ NQW  GGYYGY  GYE
Sbjct: 304 FVQFADRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGYYGYGQGYE 363

Query: 415 TYGYAPSAQDPNM 453
            Y YAP+ QDPNM
Sbjct: 364 NYSYAPAPQDPNM 376



 Score =  109 bits (273), Expect(2) = 4e-54
 Identities = 48/62 (77%), Positives = 56/62 (90%)
 Frame = +2

Query: 5   SYQGTQGTPNEDDPSNTTLFVGNLDSTVTDDHLRQLFGHYGQLLHVKIPVGKRCGFVQFA 184
           SYQ  QG  NE+DP+NTT+FVGNLD+ VTD+HLRQ+FG YG+L+HVKIPVGKRCGFVQFA
Sbjct: 249 SYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGKRCGFVQFA 308

Query: 185 DR 190
           DR
Sbjct: 309 DR 310


>ref|XP_004153241.1| PREDICTED: polyadenylate-binding protein RBP45-like, partial
           [Cucumis sativus]
          Length = 156

 Score =  128 bits (322), Expect(2) = 4e-54
 Identities = 59/73 (80%), Positives = 64/73 (87%), Gaps = 1/73 (1%)
 Frame = +1

Query: 238 FVQFADRSCAEEALRMLNGTQLVGQNIRLSWGRSPSNKQPQAEANQW-AGGYYGYPSGYE 414
           FVQFADR+CAEEALR+LNGTQ+ GQNIRLSWGRSPSNKQPQA+ NQW  GGYYGY  GYE
Sbjct: 56  FVQFADRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGYYGYGQGYE 115

Query: 415 TYGYAPSAQDPNM 453
            Y YAP+ QDPNM
Sbjct: 116 NYSYAPAPQDPNM 128



 Score =  109 bits (273), Expect(2) = 4e-54
 Identities = 48/62 (77%), Positives = 56/62 (90%)
 Frame = +2

Query: 5   SYQGTQGTPNEDDPSNTTLFVGNLDSTVTDDHLRQLFGHYGQLLHVKIPVGKRCGFVQFA 184
           SYQ  QG  NE+DP+NTT+FVGNLD+ VTD+HLRQ+FG YG+L+HVKIPVGKRCGFVQFA
Sbjct: 1   SYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGKRCGFVQFA 60

Query: 185 DR 190
           DR
Sbjct: 61  DR 62


>ref|XP_002518499.1| nuclear acid binding protein, putative [Ricinus communis]
           gi|223542344|gb|EEF43886.1| nuclear acid binding
           protein, putative [Ricinus communis]
          Length = 430

 Score =  131 bits (330), Expect(2) = 2e-53
 Identities = 59/72 (81%), Positives = 63/72 (87%)
 Frame = +1

Query: 238 FVQFADRSCAEEALRMLNGTQLVGQNIRLSWGRSPSNKQPQAEANQWAGGYYGYPSGYET 417
           FVQFADRSCAEEALR+LNGT L GQ+IRLSWGRSPSNKQPQ +ANQW  GYYGY  GYE 
Sbjct: 329 FVQFADRSCAEEALRLLNGTSLSGQSIRLSWGRSPSNKQPQPDANQWNAGYYGYAQGYEN 388

Query: 418 YGYAPSAQDPNM 453
           YGYAP+ QDPNM
Sbjct: 389 YGYAPAPQDPNM 400



 Score =  104 bits (260), Expect(2) = 2e-53
 Identities = 50/64 (78%), Positives = 56/64 (87%), Gaps = 1/64 (1%)
 Frame = +2

Query: 2   ASYQGTQGT-PNEDDPSNTTLFVGNLDSTVTDDHLRQLFGHYGQLLHVKIPVGKRCGFVQ 178
           ASYQ +Q    NE+DP+NTT+FVGNLDS VTDD+LR+LFG YGQLLHVKIP GKRCGFVQ
Sbjct: 272 ASYQNSQTQGENENDPNNTTIFVGNLDSNVTDDNLRELFGRYGQLLHVKIPAGKRCGFVQ 331

Query: 179 FADR 190
           FADR
Sbjct: 332 FADR 335


>ref|XP_003529629.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
           [Glycine max]
          Length = 397

 Score =  122 bits (305), Expect(2) = 4e-53
 Identities = 59/76 (77%), Positives = 63/76 (82%), Gaps = 4/76 (5%)
 Frame = +1

Query: 238 FVQFADRSCAEEALRMLNGTQLVGQNIRLSWGRSPSNKQPQAEANQW---AGGYYGY-PS 405
           FVQFADRSCAEEALR+LNGT L GQN+RLSWGRSPSNKQ Q +ANQW    GGYYGY   
Sbjct: 300 FVQFADRSCAEEALRVLNGTLLGGQNVRLSWGRSPSNKQAQPDANQWNGSGGGYYGYAQG 359

Query: 406 GYETYGYAPSAQDPNM 453
           GYE YGYAP+ QDPNM
Sbjct: 360 GYENYGYAPAGQDPNM 375



 Score =  112 bits (281), Expect(2) = 4e-53
 Identities = 50/63 (79%), Positives = 55/63 (87%)
 Frame = +2

Query: 2   ASYQGTQGTPNEDDPSNTTLFVGNLDSTVTDDHLRQLFGHYGQLLHVKIPVGKRCGFVQF 181
           ASYQ  QG  NE DP+NTT+FVGNLD  VTDDHLRQ+FGHYG+L+HVKIP GKRCGFVQF
Sbjct: 244 ASYQNPQGAQNEHDPNNTTIFVGNLDPNVTDDHLRQVFGHYGELVHVKIPAGKRCGFVQF 303

Query: 182 ADR 190
           ADR
Sbjct: 304 ADR 306


>ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
           sativus] gi|449472157|ref|XP_004153511.1| PREDICTED:
           polyadenylate-binding protein RBP45-like [Cucumis
           sativus]
          Length = 408

 Score =  126 bits (316), Expect(2) = 4e-52
 Identities = 59/78 (75%), Positives = 64/78 (82%), Gaps = 6/78 (7%)
 Frame = +1

Query: 238 FVQFADRSCAEEALRMLNGTQLVGQNIRLSWGRSPSNKQPQAEANQW------AGGYYGY 399
           FVQF+DRSCAEEALR+LNGT + GQNIRLSWGRSPSNKQPQA+ NQW       GGYYGY
Sbjct: 304 FVQFSDRSCAEEALRILNGTPIGGQNIRLSWGRSPSNKQPQADPNQWNGGGGGGGGYYGY 363

Query: 400 PSGYETYGYAPSAQDPNM 453
             GYE Y YAP+AQDPNM
Sbjct: 364 GQGYENYSYAPAAQDPNM 381



 Score =  105 bits (262), Expect(2) = 4e-52
 Identities = 46/62 (74%), Positives = 54/62 (87%)
 Frame = +2

Query: 5   SYQGTQGTPNEDDPSNTTLFVGNLDSTVTDDHLRQLFGHYGQLLHVKIPVGKRCGFVQFA 184
           SYQ   GT NE+DP+NTT+FVGNLDS VTD+HLRQ+F  YG+L+HVKIP GKRCGFVQF+
Sbjct: 249 SYQNPPGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCGFVQFS 308

Query: 185 DR 190
           DR
Sbjct: 309 DR 310


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