BLASTX nr result

ID: Cephaelis21_contig00006549 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00006549
         (1042 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACZ54945.1| type 2 histone deacetylase a [Nicotiana tabacum]       151   3e-34
gb|ACZ54946.1| type 2 histone deacetylase b [Nicotiana tabacum]       150   5e-34
gb|ACZ54947.1| type 2 histone deacetylase c [Nicotiana tabacum]       140   5e-31
sp|Q6V9I6.1|HDT1_SOLCH RecName: Full=Histone deacetylase HDT1; A...   131   2e-28
emb|CBI30241.3| unnamed protein product [Vitis vinifera]              131   2e-28

>gb|ACZ54945.1| type 2 histone deacetylase a [Nicotiana tabacum]
          Length = 295

 Score =  151 bits (381), Expect = 3e-34
 Identities = 84/159 (52%), Positives = 96/159 (60%)
 Frame = +3

Query: 78  GKQKVKIVEPNRDSVVKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 257
           GKQKVKIVEP++D+                                              
Sbjct: 144 GKQKVKIVEPSKDAKADDEDESTDEDEMSEDEDSDMGEGEDESDGDDESDEGEEE----- 198

Query: 258 XTPKKVETGKKRTANSAVKTPGQDKKAKLTTPQKTDGKKGGGHVATPYPSKQAGKTLANK 437
            TPKK E GKKR A+SA KTP  DKKAK  TPQKTDGKKG GHVATP+PSKQAGK+ ANK
Sbjct: 199 -TPKKAEPGKKRKADSATKTPVPDKKAKFVTPQKTDGKKGSGHVATPHPSKQAGKSPANK 257

Query: 438 NQQTQKSGGGSHVCKSCNKTFNSENAVESHTKAKHSAGK 554
           NQQT KS GG+H+CK+CN+ F SENA+E H+KAKHSA K
Sbjct: 258 NQQTPKS-GGAHLCKTCNRGFGSENALEFHSKAKHSAAK 295


>gb|ACZ54946.1| type 2 histone deacetylase b [Nicotiana tabacum]
          Length = 294

 Score =  150 bits (379), Expect = 5e-34
 Identities = 85/159 (53%), Positives = 97/159 (61%)
 Frame = +3

Query: 78  GKQKVKIVEPNRDSVVKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 257
           GKQKVKIVEP++D+                                              
Sbjct: 144 GKQKVKIVEPSKDAKADDEDESTDEDEMSEDEDSDVGEGEDESDEDDESDESEEE----- 198

Query: 258 XTPKKVETGKKRTANSAVKTPGQDKKAKLTTPQKTDGKKGGGHVATPYPSKQAGKTLANK 437
            TPKK E GKKR A+SA KTP  DKKAK  TPQKTDGKKG GHVATP+PSKQAGK+ ANK
Sbjct: 199 -TPKKAEPGKKRKADSATKTPA-DKKAKFVTPQKTDGKKGSGHVATPHPSKQAGKSPANK 256

Query: 438 NQQTQKSGGGSHVCKSCNKTFNSENAVESHTKAKHSAGK 554
           NQQT KS GG+H+CK+CN+ F SENA+ESH+KAKHSA K
Sbjct: 257 NQQTPKS-GGAHLCKTCNRGFGSENALESHSKAKHSAAK 294


>gb|ACZ54947.1| type 2 histone deacetylase c [Nicotiana tabacum]
          Length = 282

 Score =  140 bits (353), Expect = 5e-31
 Identities = 68/98 (69%), Positives = 78/98 (79%)
 Frame = +3

Query: 261 TPKKVETGKKRTANSAVKTPGQDKKAKLTTPQKTDGKKGGGHVATPYPSKQAGKTLANKN 440
           TPKK E  KKR ++SA+KTP  DKKAK  TPQKTDGKKG  HVATP+PSKQAGKT  NK+
Sbjct: 186 TPKKAEPSKKRPSDSAIKTPAPDKKAKFATPQKTDGKKGAVHVATPHPSKQAGKTSGNKS 245

Query: 441 QQTQKSGGGSHVCKSCNKTFNSENAVESHTKAKHSAGK 554
            QT KS GGS  CK+C++TF SE A+ESH+KAKHS GK
Sbjct: 246 NQTPKS-GGSLACKTCSRTFGSETALESHSKAKHSVGK 282


>sp|Q6V9I6.1|HDT1_SOLCH RecName: Full=Histone deacetylase HDT1; AltName: Full=Histone
           deacetylase 2a; Short=HD2a; AltName: Full=ScHD2a
           gi|33667906|gb|AAQ24532.1| histone deacetylase [Solanum
           chacoense]
          Length = 269

 Score =  131 bits (330), Expect = 2e-28
 Identities = 65/98 (66%), Positives = 73/98 (74%)
 Frame = +3

Query: 261 TPKKVETGKKRTANSAVKTPGQDKKAKLTTPQKTDGKKGGGHVATPYPSKQAGKTLANKN 440
           TPKK E  K+R A+SA KTP  DKKAKLTTPQKTDGKKGGGHVATP+PSKQA KT     
Sbjct: 181 TPKKAEPAKRRKADSATKTPVTDKKAKLTTPQKTDGKKGGGHVATPHPSKQASKT----- 235

Query: 441 QQTQKSGGGSHVCKSCNKTFNSENAVESHTKAKHSAGK 554
                   GSH CK CN++F SE A++SH+KAKHSAGK
Sbjct: 236 ----PKSAGSHHCKPCNRSFGSEGALDSHSKAKHSAGK 269


>emb|CBI30241.3| unnamed protein product [Vitis vinifera]
          Length = 149

 Score =  131 bits (330), Expect = 2e-28
 Identities = 71/106 (66%), Positives = 76/106 (71%), Gaps = 8/106 (7%)
 Frame = +3

Query: 261 TPKKVETGKKRTANSAVKTPGQDKKAKLTTPQKTDGKKG-----GGHVATPYPSKQAGKT 425
           TPKK    KKR   S  KTP  DKKAK  TPQKTDGKK      GGHVATPYPSKQAGKT
Sbjct: 45  TPKKAGPSKKRPTESVSKTPVPDKKAKFVTPQKTDGKKSDDKKSGGHVATPYPSKQAGKT 104

Query: 426 LANKN---QQTQKSGGGSHVCKSCNKTFNSENAVESHTKAKHSAGK 554
            AN     QQ QKSGG S  CKSCN++FNSENA++SHTKAKH+A K
Sbjct: 105 PANTEKPKQQVQKSGG-SFSCKSCNRSFNSENALQSHTKAKHTAAK 149


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