BLASTX nr result

ID: Cephaelis21_contig00006537 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00006537
         (1549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273255.1| PREDICTED: pentatricopeptide repeat-containi...   365   e-118
ref|XP_004167767.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   351   e-116
ref|XP_004142106.1| PREDICTED: pentatricopeptide repeat-containi...   348   e-116
ref|XP_002326162.1| predicted protein [Populus trichocarpa] gi|2...   344   e-113
dbj|BAC42187.2| unknown protein [Arabidopsis thaliana]                336   e-103

>ref|XP_002273255.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
            chloroplastic [Vitis vinifera]
            gi|297741486|emb|CBI32618.3| unnamed protein product
            [Vitis vinifera]
          Length = 842

 Score =  365 bits (938), Expect(2) = e-118
 Identities = 179/274 (65%), Positives = 216/274 (78%)
 Frame = +3

Query: 726  LFSDLRFSTKQLVAPSEIIRLCVKKRSPSAAIRYAQSFPQVDTLLCTIMIEFGNQGDLVS 905
            +     F  K+L+ P + I++CV KR+P+ A+RYA   P    L CTI+ EFG + DL S
Sbjct: 169  ILDGFHFPVKKLLEPLDFIKICVNKRNPNLAVRYACILPHAQILFCTIIHEFGKKRDLGS 228

Query: 906  ALTVFEASKKNQGYPNTYAYRTIIDVCGLCGDILKSRSIYEELLACKFTPNIYVFNSLLN 1085
            ALT FEASK+    PN Y YRT+IDVCGLC    KSR IYEELLA K TPNIYVFNSL+N
Sbjct: 229  ALTAFEASKQKLIGPNMYCYRTMIDVCGLCSHYQKSRYIYEELLAQKITPNIYVFNSLMN 288

Query: 1086 VNASDLSFTLHIYKQMQKVGVIADLASYNILLKSCCLAARVDLALDVYRIARHLESVGDL 1265
            VN  DLS+T ++YK MQ +GV AD+ASYNILLK+CC+A RVDLA ++YR  ++LES G L
Sbjct: 289  VNVHDLSYTFNVYKNMQNLGVTADMASYNILLKACCVAGRVDLAQEIYREVQNLESNGML 348

Query: 1266 KLDVFTYSTMIKVLADARMWKMALEIKEDMLLAGVIPNSITWLSLISACANAGLAEQAIR 1445
            KLDVFTYST+IKV ADA++W+MAL+IKEDML AGVIPN++TW +LIS+CANAG+ EQAI+
Sbjct: 349  KLDVFTYSTIIKVFADAKLWQMALKIKEDMLSAGVIPNTVTWSALISSCANAGITEQAIQ 408

Query: 1446 LFDEMLQAGCEPNSQCCNIVLHAFVEACQYDRAF 1547
            LF EML AGCEPNSQC NI+LHA VEACQYDRAF
Sbjct: 409  LFKEMLLAGCEPNSQCYNILLHACVEACQYDRAF 442



 Score = 88.2 bits (217), Expect(2) = e-118
 Identities = 59/138 (42%), Positives = 82/138 (59%)
 Frame = +1

Query: 307 SLNSAASLLHSTVRWDTVTSSRSLQRLKDYAHLASNLAEDGRFHDLLMIAESVVVSGAKP 486
           SL S   LL S VRWD          L +Y+ LA+ L +DGRF D   +AE++++SG + 
Sbjct: 50  SLRSRHPLL-SDVRWD----------LNNYSDLATKLVQDGRFDDFSTMAETLILSGVEL 98

Query: 487 SQFLALLNVNIVSAGISRVLKEGKLESLIEVLGGLKKLDFDVIKLFDRLAFEALRQESRR 666
           SQ      V +VSAGIS +L+EG++  ++EVL  + KL    ++LFD    E L +E RR
Sbjct: 99  SQL-----VELVSAGISGLLREGRVYCVVEVLRKVDKLGICPLELFDGSTLELLSKECRR 153

Query: 667 RLQICGRAEEVVSLMESL 720
            L  CG+ EEVV L+E L
Sbjct: 154 ILN-CGQVEEVVELIEIL 170


>ref|XP_004167767.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At5g02830, chloroplastic-like [Cucumis sativus]
          Length = 855

 Score =  351 bits (900), Expect(2) = e-116
 Identities = 168/274 (61%), Positives = 208/274 (75%)
 Frame = +3

Query: 726  LFSDLRFSTKQLVAPSEIIRLCVKKRSPSAAIRYAQSFPQVDTLLCTIMIEFGNQGDLVS 905
            + S   FS ++++ PSE+I+LCV  R+P  AIRYA   P  D L CT + EFG + DL S
Sbjct: 185  VLSGFGFSVREMMKPSEVIKLCVDYRNPKMAIRYASILPHADILFCTTINEFGKKRDLKS 244

Query: 906  ALTVFEASKKNQGYPNTYAYRTIIDVCGLCGDILKSRSIYEELLACKFTPNIYVFNSLLN 1085
            A   +  SK N    N Y YRTIIDVCGLCGD  KSR+IY++L+    TPNI+VFNSL+N
Sbjct: 245  AYIAYTESKANMNGSNMYIYRTIIDVCGLCGDYKKSRNIYQDLVNQNVTPNIFVFNSLMN 304

Query: 1086 VNASDLSFTLHIYKQMQKVGVIADLASYNILLKSCCLAARVDLALDVYRIARHLESVGDL 1265
            VNA DL++T  +YK MQ +GV AD+ASYNILLK+CCLA RVDLA D+YR  +HLE+ G L
Sbjct: 305  VNAHDLNYTFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYREVKHLETTGVL 364

Query: 1266 KLDVFTYSTMIKVLADARMWKMALEIKEDMLLAGVIPNSITWLSLISACANAGLAEQAIR 1445
            KLDVFTYST++KV ADA++WKMAL +KEDM  AGV PN +TW SLIS+CAN+GL E AI+
Sbjct: 365  KLDVFTYSTIVKVFADAKLWKMALRVKEDMQSAGVSPNMVTWSSLISSCANSGLVELAIQ 424

Query: 1446 LFDEMLQAGCEPNSQCCNIVLHAFVEACQYDRAF 1547
            LF+EM+ AGCEPN+QCCN +LHA VE  Q+DRAF
Sbjct: 425  LFEEMVSAGCEPNTQCCNTLLHACVEGRQFDRAF 458



 Score = 97.1 bits (240), Expect(2) = e-116
 Identities = 53/112 (47%), Positives = 78/112 (69%)
 Frame = +1

Query: 385 LKDYAHLASNLAEDGRFHDLLMIAESVVVSGAKPSQFLALLNVNIVSAGISRVLKEGKLE 564
           ++ YA +AS LAE G+  D  M+ ESVVV+G +PSQF A+L V +V+ GISR L+EGK+ 
Sbjct: 76  IQHYAGVASKLAEGGKLEDFAMVVESVVVAGVEPSQFGAMLAVELVAKGISRCLREGKVW 135

Query: 565 SLIEVLGGLKKLDFDVIKLFDRLAFEALRQESRRRLQICGRAEEVVSLMESL 720
           S+++VL  +++L   V++L D  A E+LR++ RR  +  G  EE+V LME L
Sbjct: 136 SVVQVLRKVEELGISVLELCDEPAVESLRRDCRRMAK-SGELEELVELMEVL 186


>ref|XP_004142106.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
            chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  348 bits (894), Expect(2) = e-116
 Identities = 167/274 (60%), Positives = 207/274 (75%)
 Frame = +3

Query: 726  LFSDLRFSTKQLVAPSEIIRLCVKKRSPSAAIRYAQSFPQVDTLLCTIMIEFGNQGDLVS 905
            + S   FS ++++ PSE+I+LCV  R+P  AIRYA   P  D L CT + EFG + DL S
Sbjct: 185  VLSGFGFSVREMMKPSEVIKLCVDYRNPKMAIRYASILPHADILFCTTINEFGKKRDLKS 244

Query: 906  ALTVFEASKKNQGYPNTYAYRTIIDVCGLCGDILKSRSIYEELLACKFTPNIYVFNSLLN 1085
            A   +  SK N    N Y YRTIIDVCGLCGD  KSR+IY++L+     PNI+VFNSL+N
Sbjct: 245  AYIAYTESKANMNGSNMYIYRTIIDVCGLCGDYKKSRNIYQDLVNQNVIPNIFVFNSLMN 304

Query: 1086 VNASDLSFTLHIYKQMQKVGVIADLASYNILLKSCCLAARVDLALDVYRIARHLESVGDL 1265
            VNA DL++T  +YK MQ +GV AD+ASYNILLK+CCLA RVDLA D+YR  +HLE+ G L
Sbjct: 305  VNAHDLNYTFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYREVKHLETTGVL 364

Query: 1266 KLDVFTYSTMIKVLADARMWKMALEIKEDMLLAGVIPNSITWLSLISACANAGLAEQAIR 1445
            KLDVFTYST++KV ADA++WKMAL +KEDM  AGV PN +TW SLIS+CAN+GL E AI+
Sbjct: 365  KLDVFTYSTIVKVFADAKLWKMALRVKEDMQSAGVSPNMVTWSSLISSCANSGLVELAIQ 424

Query: 1446 LFDEMLQAGCEPNSQCCNIVLHAFVEACQYDRAF 1547
            LF+EM+ AGCEPN+QCCN +LHA VE  Q+DRAF
Sbjct: 425  LFEEMVSAGCEPNTQCCNTLLHACVEGRQFDRAF 458



 Score = 97.1 bits (240), Expect(2) = e-116
 Identities = 53/112 (47%), Positives = 78/112 (69%)
 Frame = +1

Query: 385 LKDYAHLASNLAEDGRFHDLLMIAESVVVSGAKPSQFLALLNVNIVSAGISRVLKEGKLE 564
           ++ YA +AS LAE G+  D  M+ ESVVV+G +PSQF A+L V +V+ GISR L+EGK+ 
Sbjct: 76  IQHYAGVASKLAEGGKLEDFAMVVESVVVAGVEPSQFGAMLAVELVAKGISRCLREGKVW 135

Query: 565 SLIEVLGGLKKLDFDVIKLFDRLAFEALRQESRRRLQICGRAEEVVSLMESL 720
           S+++VL  +++L   V++L D  A E+LR++ RR  +  G  EE+V LME L
Sbjct: 136 SVVQVLRKVEELGISVLELCDEPAVESLRRDCRRMAK-SGELEELVELMEVL 186



 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 38/149 (25%), Positives = 76/149 (51%), Gaps = 3/149 (2%)
 Frame = +3

Query: 1047 FTPNIYVFNSLLNVNASDLSFTLHIYKQMQKVGVIADLASYNILLKSCCLAARVDLALDV 1226
            F P I  +N L+    +D      + ++M+ VG+  +  S++IL+  C  +  V+ A+ +
Sbjct: 514  FKPTITTYNILMKACGTDYYHAKALMEEMKSVGLTPNHISWSILVDICGRSHDVESAVQI 573

Query: 1227 YRIARHLESVGDLKLDVFTYSTMIKVLADARMWKMALEIKEDMLLAGVIPNSITWLSLIS 1406
                R    +  +  DV  Y+T IKV  + + WK+A  + E+M    + PN +T+ +L+ 
Sbjct: 574  LTTMR----MAGVDPDVVAYTTAIKVCVEGKNWKLAFSLFEEMKRFEIQPNLVTYSTLLR 629

Query: 1407 ACANAGL---AEQAIRLFDEMLQAGCEPN 1484
            A +  G     +Q + ++ +M ++G + N
Sbjct: 630  ARSTYGSLHEVQQCLAIYQDMRKSGFKSN 658


>ref|XP_002326162.1| predicted protein [Populus trichocarpa] gi|222833355|gb|EEE71832.1|
            predicted protein [Populus trichocarpa]
          Length = 828

 Score =  344 bits (883), Expect(2) = e-113
 Identities = 168/269 (62%), Positives = 207/269 (76%), Gaps = 1/269 (0%)
 Frame = +3

Query: 744  FSTKQLVAPSEIIRLCVKKRSPSAAIRYAQSFPQVDTLL-CTIMIEFGNQGDLVSALTVF 920
            FS K+LV PS II++CV K +P  A+RYA  FP    +L C I+ EFG +G L SAL  +
Sbjct: 186  FSFKELVDPSYIIKICVDKLNPKMAVRYAAIFPGEGRILFCNIISEFGRKGHLDSALVAY 245

Query: 921  EASKKNQGYPNTYAYRTIIDVCGLCGDILKSRSIYEELLACKFTPNIYVFNSLLNVNASD 1100
            + +K     PN Y +RTIIDVCGLCGD +KSR IYE+L+  K  PN+YVFNSL+NVNA D
Sbjct: 246  DEAKHKLSVPNMYLHRTIIDVCGLCGDYMKSRYIYEDLINRKVIPNVYVFNSLMNVNAHD 305

Query: 1101 LSFTLHIYKQMQKVGVIADLASYNILLKSCCLAARVDLALDVYRIARHLESVGDLKLDVF 1280
            L +T  ++K MQ +GV AD+ASYNILLK+CC+A RVDLA D+YR  + LES   LKLDVF
Sbjct: 306  LGYTFSVFKNMQNLGVTADVASYNILLKACCIAGRVDLAKDIYREVKQLESAEVLKLDVF 365

Query: 1281 TYSTMIKVLADARMWKMALEIKEDMLLAGVIPNSITWLSLISACANAGLAEQAIRLFDEM 1460
            TY  ++K+ ADA+MW+MAL+IKEDML +GV PN   W SLISACANAGL EQAI+LF+EM
Sbjct: 366  TYCMIVKIFADAKMWQMALKIKEDMLSSGVTPNMHIWSSLISACANAGLVEQAIQLFEEM 425

Query: 1461 LQAGCEPNSQCCNIVLHAFVEACQYDRAF 1547
            L +GC+PNSQCCNI+LHA V+ACQYDRAF
Sbjct: 426  LLSGCKPNSQCCNILLHACVQACQYDRAF 454



 Score = 94.0 bits (232), Expect(2) = e-113
 Identities = 59/160 (36%), Positives = 98/160 (61%), Gaps = 3/160 (1%)
 Frame = +1

Query: 271 KPKSKKVYGRKR---SLNSAASLLHSTVRWDTVTSSRSLQRLKDYAHLASNLAEDGRFHD 441
           KPK+  ++   +   +++S +  L ST+ +    +S SL  L  +A+LAS LAEDGR  D
Sbjct: 32  KPKTPSLHAPSKPIPAVHSRSPPLLSTIPFRQNHNSSSL--LDYHANLASKLAEDGRLQD 89

Query: 442 LLMIAESVVVSGAKPSQFLALLNVNIVSAGISRVLKEGKLESLIEVLGGLKKLDFDVIKL 621
            +MIAESV+ SG +PS F+A L+V  V+ GIS+ L++G ++ ++  L   ++L    +K 
Sbjct: 90  FVMIAESVIASGVEPSSFVAALSVGPVAKGISKNLQQGNVDCVVRFLKKTEELGVSTLKF 149

Query: 622 FDRLAFEALRQESRRRLQICGRAEEVVSLMESLQVYFQTF 741
            D +A + L++E  R +  CG  E+VV +ME+L  +  +F
Sbjct: 150 LDGVAIDLLKKEFIRIVN-CGDVEQVVYIMETLAGFCFSF 188



 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 39/167 (23%), Positives = 79/167 (47%), Gaps = 3/167 (1%)
 Frame = +3

Query: 1047 FTPNIYVFNSLLNVNASDLSFTLHIYKQMQKVGVIADLASYNILLKSCCLAARVDLALDV 1226
            FTP    ++ L+    SD      +  +M+ VG+  +  S++IL+  C ++  V  A+ +
Sbjct: 508  FTPTPATYHMLMKACGSDYHRAKALMDEMKTVGISPNHISWSILIDICGVSGNVSGAVQI 567

Query: 1227 YRIARHLESVGDLKLDVFTYSTMIKVLADARMWKMALEIKEDMLLAGVIPNSITWLSLIS 1406
             +  R    +  ++ DV  Y+T IKV  + +  K+A  +  +M    + PN +T+ +L+ 
Sbjct: 568  LKNMR----MAGVEPDVVAYTTAIKVCVETKNLKLAFSLFAEMKRCQINPNLVTYNTLLR 623

Query: 1407 ACANAGL---AEQAIRLFDEMLQAGCEPNSQCCNIVLHAFVEACQYD 1538
            A    G     +Q + ++ +M +AG + N      ++  + E    D
Sbjct: 624  ARTRYGSLREVQQCLAIYQDMRKAGYKSNDYYLKQLIEEWCEGVIQD 670


>dbj|BAC42187.2| unknown protein [Arabidopsis thaliana]
          Length = 852

 Score =  336 bits (861), Expect(2) = e-103
 Identities = 165/274 (60%), Positives = 204/274 (74%)
 Frame = +3

Query: 726  LFSDLRFSTKQLVAPSEIIRLCVKKRSPSAAIRYAQSFPQVDTLLCTIMIEFGNQGDLVS 905
            + + L F  K+LV P ++++ CV+  +P  AIRYA   P  + LLC I+  FG +GD+VS
Sbjct: 191  ILAGLGFKIKELVDPFDVVKSCVEISNPQLAIRYACLLPHTELLLCRIIHGFGKKGDMVS 250

Query: 906  ALTVFEASKKNQGYPNTYAYRTIIDVCGLCGDILKSRSIYEELLACKFTPNIYVFNSLLN 1085
             +T +EA K+    PN Y  RT+IDVCGLCGD +KSR IYE+LL     PNIYV NSL+N
Sbjct: 251  VMTAYEACKQILDTPNMYICRTMIDVCGLCGDYVKSRYIYEDLLKENIKPNIYVINSLMN 310

Query: 1086 VNASDLSFTLHIYKQMQKVGVIADLASYNILLKSCCLAARVDLALDVYRIARHLESVGDL 1265
            VN+ DL +TL +YK MQ + V AD+ SYNILLK+CCLA RVDLA D+Y+ A+ +ES G L
Sbjct: 311  VNSHDLGYTLKVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLL 370

Query: 1266 KLDVFTYSTMIKVLADARMWKMALEIKEDMLLAGVIPNSITWLSLISACANAGLAEQAIR 1445
            KLD FTY T+IKV ADA+MWK AL++K+DM   GV PN+ TW SLISACANAGL EQA  
Sbjct: 371  KLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANH 430

Query: 1446 LFDEMLQAGCEPNSQCCNIVLHAFVEACQYDRAF 1547
            LF+EML +GCEPNSQC NI+LHA VEACQYDRAF
Sbjct: 431  LFEEMLASGCEPNSQCFNILLHACVEACQYDRAF 464



 Score = 69.3 bits (168), Expect(2) = e-103
 Identities = 45/137 (32%), Positives = 79/137 (57%), Gaps = 1/137 (0%)
 Frame = +1

Query: 313 NSAASLLHSTVRWDTVTSSRSLQRLKDYAHLASNLAEDGRFHDLLMIAESVVV-SGAKPS 489
           +S +S   + VRW    S      L+ YA  AS LAEDGR  D+ +IAE++   SGA  +
Sbjct: 63  HSLSSHFSNVVRWIPDGS------LEYYADFASKLAEDGRIEDVALIAETLAAESGANVA 116

Query: 490 QFLALLNVNIVSAGISRVLKEGKLESLIEVLGGLKKLDFDVIKLFDRLAFEALRQESRRR 669
           +F ++++ +++S GIS  L++GK+ES++  L  ++K+    + L D  + + +R++ R  
Sbjct: 117 RFASMVDYDLLSKGISSNLRQGKIESVVYTLKRIEKVGIAPLDLVDDSSVKLMRKQFRAM 176

Query: 670 LQICGRAEEVVSLMESL 720
                + E+ + LME L
Sbjct: 177 ANSV-QVEKAIDLMEIL 192



 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 41/162 (25%), Positives = 79/162 (48%), Gaps = 3/162 (1%)
 Frame = +3

Query: 1047 FTPNIYVFNSLLNVNASDLSFTLHIYKQMQKVGVIADLASYNILLKSCCLAARVDLALDV 1226
            F P    +N LL    +D      +  +M+ +G+  +  +++ L+  C  +  V+ A+  
Sbjct: 522  FKPTTATYNILLKACGTDYYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAV-- 579

Query: 1227 YRIARHLESVGDLKLDVFTYSTMIKVLADARMWKMALEIKEDMLLAGVIPNSITWLSLIS 1406
             RI R + S G  + DV  Y+T IK+ A+ +  K+A  + E+M    + PN +T+ +L+ 
Sbjct: 580  -RILRTMHSAGT-RPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLK 637

Query: 1407 ACANAGL---AEQAIRLFDEMLQAGCEPNSQCCNIVLHAFVE 1523
            A +  G      Q + ++ +M  AG +PN      ++  + E
Sbjct: 638  ARSKYGSLLEVRQCLAIYQDMRNAGYKPNDHFLKELIEEWCE 679


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