BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00006536
         (817 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P30956.1|RK28_TOBAC RecName: Full=50S ribosomal protein L28, ...   198   1e-48
gb|ABK95755.1| unknown [Populus trichocarpa]                          197   3e-48
gb|ABK96762.1| unknown [Populus trichocarpa x Populus deltoides]      193   3e-47
ref|XP_002315574.1| predicted protein [Populus trichocarpa] gi|2...   189   5e-46
ref|XP_004170905.1| PREDICTED: 50S ribosomal protein L28, chloro...   184   2e-44

>sp|P30956.1|RK28_TOBAC RecName: Full=50S ribosomal protein L28, chloroplastic; AltName:
           Full=CL28; Flags: Precursor gi|279656|pir||R5NT28
           ribosomal protein L28 precursor, chloroplast - tobacco
           gi|189096147|pdb|3BBO|Y Chain Y, Homology Model For The
           Spinach Chloroplast 50s Subunit Fitted To 9.4a Cryo-Em
           Map Of The 70s Chlororibosome gi|20016|emb|CAA48211.1|
           ribosomal protein CL28 [Nicotiana tabacum]
          Length = 151

 Score =  198 bits (503), Expect = 1e-48
 Identities = 107/156 (68%), Positives = 120/156 (76%)
 Frame = -2

Query: 735 LAAKMAGSVTAAVGGLVMGPYAAIAANRPLLKVSVEGSSELGFVTSQLNGMKISFNPVQL 556
           +A  +AG    ++ G VM  +   +  +       + SSEL FVTSQL+G+KIS      
Sbjct: 1   MATMVAG---ISLRGPVMSSHRTFSVTKRASLPQSKLSSELSFVTSQLSGLKISSTHFIS 57

Query: 555 KVAPSITSAPFRPSLQPVARRVCPFTGKKSNRANKVSHSNHKTKKLQFVNLQYKRIWWEA 376
             AP   S PF+PSLQPVARR+CPFTGKKSNRANKVSHSNHKTKKLQFVNLQYKRIWWEA
Sbjct: 58  SSAP--LSVPFKPSLQPVARRICPFTGKKSNRANKVSHSNHKTKKLQFVNLQYKRIWWEA 115

Query: 375 GKRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSKE 268
           GKRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSK+
Sbjct: 116 GKRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSKK 151


>gb|ABK95755.1| unknown [Populus trichocarpa]
          Length = 150

 Score =  197 bits (500), Expect = 3e-48
 Identities = 103/152 (67%), Positives = 120/152 (78%), Gaps = 3/152 (1%)
 Frame = -2

Query: 714 SVTAAVGGLVMGPYAAIAANRPLL--KVSVEGSSELGFVTSQLNGMKISFNPVQLKVAPS 541
           ++   VGG+++G        R L   K S+   SE+GFVTSQL+G++IS+NP      P 
Sbjct: 5   AIGVGVGGVLLGNSICFRKTRQLSISKTSLVSVSEIGFVTSQLSGIRISYNP------PK 58

Query: 540 ITSAPFRPSLQPV-ARRVCPFTGKKSNRANKVSHSNHKTKKLQFVNLQYKRIWWEAGKRY 364
             SAPF P+LQPV ARR+CPFTGKK+NRANKVS SNHKTKKLQFVNLQYKR+WWEAGKRY
Sbjct: 59  PLSAPFSPALQPVIARRICPFTGKKANRANKVSFSNHKTKKLQFVNLQYKRVWWEAGKRY 118

Query: 363 VKLRLSTKAIKTIEKNGLDAVAKKAGIDLSKE 268
           VKLRLSTKA+KTIEKNGLDAVAKKAGIDL K+
Sbjct: 119 VKLRLSTKALKTIEKNGLDAVAKKAGIDLRKK 150


>gb|ABK96762.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 153

 Score =  193 bits (491), Expect = 3e-47
 Identities = 103/159 (64%), Positives = 120/159 (75%), Gaps = 3/159 (1%)
 Frame = -2

Query: 735 LAAKMAGSVTAAVGGLVMGPYAAIAANRPLL--KVSVEGSSELGFVTSQLNGMKISFNPV 562
           +A    G      GG+++G        + L   K S+   SE+GFVTSQL+G++IS+NP 
Sbjct: 1   MATTAIGVGVGVGGGVLLGNSICFRKTQQLSISKTSLVSVSEIGFVTSQLSGIRISYNP- 59

Query: 561 QLKVAPSITSAPFRPSLQPV-ARRVCPFTGKKSNRANKVSHSNHKTKKLQFVNLQYKRIW 385
                P   SAPF P+LQPV ARR+CPFTGKK+NRANKVS SNHKTKKLQFVNLQYKR+W
Sbjct: 60  -----PEPLSAPFSPALQPVIARRICPFTGKKANRANKVSFSNHKTKKLQFVNLQYKRVW 114

Query: 384 WEAGKRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSKE 268
           WEAGKRYVKLRLSTKA+KTIEKNGLDAVAKKAGIDL K+
Sbjct: 115 WEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKK 153


>ref|XP_002315574.1| predicted protein [Populus trichocarpa] gi|222864614|gb|EEF01745.1|
           predicted protein [Populus trichocarpa]
          Length = 118

 Score =  189 bits (481), Expect = 5e-46
 Identities = 96/124 (77%), Positives = 108/124 (87%), Gaps = 1/124 (0%)
 Frame = -2

Query: 636 SVEGSSELGFVTSQLNGMKISFNPVQLKVAPSITSAPFRPSLQPV-ARRVCPFTGKKSNR 460
           S+   SE+GFVTSQL+G++IS+NP      P   SAPF P+LQPV ARR+CPFTGKK+NR
Sbjct: 1   SLVSVSEIGFVTSQLSGIRISYNP------PKPLSAPFSPALQPVIARRICPFTGKKANR 54

Query: 459 ANKVSHSNHKTKKLQFVNLQYKRIWWEAGKRYVKLRLSTKAIKTIEKNGLDAVAKKAGID 280
           ANKVS SNHKTKKLQFVNLQYKR+WWEAGKRYVKLRLSTKA+KTIEKNGLDAVAKKAGID
Sbjct: 55  ANKVSFSNHKTKKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGID 114

Query: 279 LSKE 268
           L K+
Sbjct: 115 LRKK 118


>ref|XP_004170905.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Cucumis
           sativus]
          Length = 150

 Score =  184 bits (468), Expect = 2e-44
 Identities = 91/119 (76%), Positives = 107/119 (89%)
 Frame = -2

Query: 624 SSELGFVTSQLNGMKISFNPVQLKVAPSITSAPFRPSLQPVARRVCPFTGKKSNRANKVS 445
           SS+LGF+TSQL+G++IS N   +  + SI++AP RPSLQPVARR+CPFTGKK+N+ N VS
Sbjct: 33  SSDLGFLTSQLSGIRISSNHSLISPS-SISTAPLRPSLQPVARRICPFTGKKANKKNLVS 91

Query: 444 HSNHKTKKLQFVNLQYKRIWWEAGKRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSKE 268
            SNHKTKKLQFVNLQYK++WWEAGKR+VKLRLSTKA+KTIEKNGLDAVAKKAGIDL KE
Sbjct: 92  FSNHKTKKLQFVNLQYKKVWWEAGKRFVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE 150