BLASTX nr result

ID: Cephaelis21_contig00006460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00006460
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_201036.1| 40S ribosomal protein S20-1 [Arabidopsis thalia...    96   2e-18
ref|XP_002877555.1| 40S ribosomal protein S20 [Arabidopsis lyrat...    96   2e-18
ref|XP_002866483.1| 40S ribosomal protein S20 [Arabidopsis lyrat...    96   2e-18
ref|XP_002866482.1| 40S ribosomal protein S20 [Arabidopsis lyrat...    96   2e-18
emb|CBI24538.3| unnamed protein product [Vitis vinifera]               96   2e-18

>ref|NP_201036.1| 40S ribosomal protein S20-1 [Arabidopsis thaliana]
           gi|22331606|ref|NP_190089.2| 40S ribosomal protein S20-1
           [Arabidopsis thaliana] gi|145334871|ref|NP_001078781.1|
           40S ribosomal protein S20-1 [Arabidopsis thaliana]
           gi|21542443|sp|P49200.2|RS201_ARATH RecName: Full=40S
           ribosomal protein S20-1
           gi|11762182|gb|AAG40369.1|AF325017_1 AT5g62300
           [Arabidopsis thaliana]
           gi|13877519|gb|AAK43837.1|AF370460_1 40S ribosomal
           protein S20 [Arabidopsis thaliana]
           gi|20465624|gb|AAM20143.1| putative 40S ribsomomal
           protein [Arabidopsis thaliana]
           gi|21281054|gb|AAM45072.1| putative 40S ribsomomal
           protein [Arabidopsis thaliana]
           gi|21553799|gb|AAM62892.1| ribosomal protein S20-like
           protein [Arabidopsis thaliana]
           gi|332010210|gb|AED97593.1| 40S ribosomal protein S20-1
           [Arabidopsis thaliana] gi|332010211|gb|AED97594.1| 40S
           ribosomal protein S20-1 [Arabidopsis thaliana]
           gi|332644460|gb|AEE77981.1| 40S ribosomal protein S20-1
           [Arabidopsis thaliana]
          Length = 124

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 47/47 (100%), Positives = 47/47 (100%)
 Frame = +2

Query: 2   GTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS 142
           GTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS
Sbjct: 78  GTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS 124


>ref|XP_002877555.1| 40S ribosomal protein S20 [Arabidopsis lyrata subsp. lyrata]
           gi|297323393|gb|EFH53814.1| 40S ribosomal protein S20
           [Arabidopsis lyrata subsp. lyrata]
          Length = 122

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 47/47 (100%), Positives = 47/47 (100%)
 Frame = +2

Query: 2   GTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS 142
           GTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS
Sbjct: 76  GTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS 122


>ref|XP_002866483.1| 40S ribosomal protein S20 [Arabidopsis lyrata subsp. lyrata]
           gi|297312318|gb|EFH42742.1| 40S ribosomal protein S20
           [Arabidopsis lyrata subsp. lyrata]
          Length = 124

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 47/47 (100%), Positives = 47/47 (100%)
 Frame = +2

Query: 2   GTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS 142
           GTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS
Sbjct: 78  GTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS 124


>ref|XP_002866482.1| 40S ribosomal protein S20 [Arabidopsis lyrata subsp. lyrata]
           gi|297312317|gb|EFH42741.1| 40S ribosomal protein S20
           [Arabidopsis lyrata subsp. lyrata]
          Length = 123

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 47/47 (100%), Positives = 47/47 (100%)
 Frame = +2

Query: 2   GTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS 142
           GTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS
Sbjct: 77  GTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS 123


>emb|CBI24538.3| unnamed protein product [Vitis vinifera]
          Length = 117

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 47/47 (100%), Positives = 47/47 (100%)
 Frame = +2

Query: 2   GTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS 142
           GTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS
Sbjct: 71  GTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS 117


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