BLASTX nr result

ID: Cephaelis21_contig00006410 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00006410
         (950 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ14059.1| hypothetical protein OsJ_03983 [Oryza sativa Japo...   288   1e-75
ref|NP_001131287.1| 40S ribosomal protein S23 [Zea mays] gi|2420...   288   2e-75
ref|NP_001044720.1| Os01g0834500 [Oryza sativa Japonica Group] g...   286   5e-75
gb|ABB16993.1| unknown [Solanum tuberosum]                            285   8e-75
ref|XP_004137806.1| PREDICTED: 40S ribosomal protein S23-like [C...   284   2e-74

>gb|EAZ14059.1| hypothetical protein OsJ_03983 [Oryza sativa Japonica Group]
          Length = 312

 Score =  288 bits (738), Expect = 1e-75
 Identities = 143/157 (91%), Positives = 147/157 (93%), Gaps = 8/157 (5%)
 Frame = +3

Query: 150 PPPT--------TVTMGKTRGMGAGRKLKTHRRNQRWADKSYKKSHLGNEWKKPFAGSSH 305
           PPP         +V MGKTRGMGAGRKLKTHRRNQRWADK+YKKSHLGNEWKKPFAGSSH
Sbjct: 156 PPPRLLGDLRCPSVNMGKTRGMGAGRKLKTHRRNQRWADKAYKKSHLGNEWKKPFAGSSH 215

Query: 306 AKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFG 485
           AKGIVLEKIGIEAKQPNSAIRKCARVQL+KNGKKIAAFVPNDGCLN+IEENDEVLIAGFG
Sbjct: 216 AKGIVLEKIGIEAKQPNSAIRKCARVQLVKNGKKIAAFVPNDGCLNFIEENDEVLIAGFG 275

Query: 486 RKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 596
           RKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS
Sbjct: 276 RKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 312



 Score =  283 bits (723), Expect = 6e-74
 Identities = 137/140 (97%), Positives = 140/140 (100%)
 Frame = +3

Query: 171 MGKTRGMGAGRKLKTHRRNQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 350
           MGKTRGMGAGRKLKTHRRNQRWADK+YKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 1   MGKTRGMGAGRKLKTHRRNQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60

Query: 351 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 530
           PNSAIRKCARVQL+KNGKKIAAFVPNDGCLN+IEENDEVLIAGFGRKGHAVGDIPGVRFK
Sbjct: 61  PNSAIRKCARVQLVKNGKKIAAFVPNDGCLNFIEENDEVLIAGFGRKGHAVGDIPGVRFK 120

Query: 531 VVKVSGVSLLALFKEKKEKP 590
           VVKVSGVSLLALFKEKKEKP
Sbjct: 121 VVKVSGVSLLALFKEKKEKP 140


>ref|NP_001131287.1| 40S ribosomal protein S23 [Zea mays]
           gi|242032479|ref|XP_002463634.1| hypothetical protein
           SORBIDRAFT_01g003410 [Sorghum bicolor]
           gi|242059153|ref|XP_002458722.1| hypothetical protein
           SORBIDRAFT_03g039010 [Sorghum bicolor]
           gi|242090801|ref|XP_002441233.1| hypothetical protein
           SORBIDRAFT_09g022840 [Sorghum bicolor]
           gi|194691088|gb|ACF79628.1| unknown [Zea mays]
           gi|194697612|gb|ACF82890.1| unknown [Zea mays]
           gi|194702740|gb|ACF85454.1| unknown [Zea mays]
           gi|195606082|gb|ACG24871.1| 40S ribosomal protein S23
           [Zea mays] gi|195618728|gb|ACG31194.1| 40S ribosomal
           protein S23 [Zea mays] gi|195619636|gb|ACG31648.1| 40S
           ribosomal protein S23 [Zea mays]
           gi|195625318|gb|ACG34489.1| 40S ribosomal protein S23
           [Zea mays] gi|195628702|gb|ACG36181.1| 40S ribosomal
           protein S23 [Zea mays] gi|195657679|gb|ACG48307.1| 40S
           ribosomal protein S23 [Zea mays]
           gi|238012290|gb|ACR37180.1| unknown [Zea mays]
           gi|241917488|gb|EER90632.1| hypothetical protein
           SORBIDRAFT_01g003410 [Sorghum bicolor]
           gi|241930697|gb|EES03842.1| hypothetical protein
           SORBIDRAFT_03g039010 [Sorghum bicolor]
           gi|241946518|gb|EES19663.1| hypothetical protein
           SORBIDRAFT_09g022840 [Sorghum bicolor]
           gi|413932622|gb|AFW67173.1| 40S ribosomal protein S23
           [Zea mays] gi|413945649|gb|AFW78298.1| 40S ribosomal
           protein S23 [Zea mays] gi|413949614|gb|AFW82263.1| 40S
           ribosomal protein S23 [Zea mays]
           gi|414873623|tpg|DAA52180.1| TPA: hypothetical protein
           ZEAMMB73_525462 [Zea mays] gi|414879834|tpg|DAA56965.1|
           TPA: 40S ribosomal protein S23 [Zea mays]
          Length = 142

 Score =  288 bits (736), Expect = 2e-75
 Identities = 140/142 (98%), Positives = 142/142 (100%)
 Frame = +3

Query: 171 MGKTRGMGAGRKLKTHRRNQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 350
           MGKTRGMGAGRKLKTHRRNQRWADK+YKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 1   MGKTRGMGAGRKLKTHRRNQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60

Query: 351 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 530
           PNSAIRKCARVQL+KNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK
Sbjct: 61  PNSAIRKCARVQLVKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 120

Query: 531 VVKVSGVSLLALFKEKKEKPRS 596
           VVKVSGVSLLALFKEKKEKPRS
Sbjct: 121 VVKVSGVSLLALFKEKKEKPRS 142


>ref|NP_001044720.1| Os01g0834500 [Oryza sativa Japonica Group]
           gi|115456215|ref|NP_001051708.1| Os03g0818400 [Oryza
           sativa Japonica Group] gi|297720551|ref|NP_001172637.1|
           Os01g0834601 [Oryza sativa Japonica Group]
           gi|357125752|ref|XP_003564554.1| PREDICTED: 40S
           ribosomal protein S23-like [Brachypodium distachyon]
           gi|357133327|ref|XP_003568277.1| PREDICTED: 40S
           ribosomal protein S23-like [Brachypodium distachyon]
           gi|313103637|pdb|3IZ6|L Chain L, Localization Of The
           Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em
           Map Of Triticum Aestivum Translating 80s Ribosome
           gi|20805266|dbj|BAB92932.1| putative 40s ribosomal
           protein S23 [Oryza sativa Japonica Group]
           gi|20805267|dbj|BAB92933.1| putative 40s ribosomal
           protein S23 [Oryza sativa Japonica Group]
           gi|21671347|dbj|BAC02683.1| putative 40s ribosomal
           protein S23 [Oryza sativa Japonica Group]
           gi|21671348|dbj|BAC02684.1| putative 40s ribosomal
           protein S23 [Oryza sativa Japonica Group]
           gi|28876025|gb|AAO60034.1| 40S ribosomal protein S23
           [Oryza sativa Japonica Group] gi|29124115|gb|AAO65856.1|
           40S ribosomal protein S23 [Oryza sativa Japonica Group]
           gi|108711771|gb|ABF99566.1| 40S ribosomal protein S23,
           putative, expressed [Oryza sativa Japonica Group]
           gi|113534251|dbj|BAF06634.1| Os01g0834500 [Oryza sativa
           Japonica Group] gi|113550179|dbj|BAF13622.1|
           Os03g0818400 [Oryza sativa Japonica Group]
           gi|125528286|gb|EAY76400.1| hypothetical protein
           OsI_04329 [Oryza sativa Indica Group]
           gi|125546216|gb|EAY92355.1| hypothetical protein
           OsI_14082 [Oryza sativa Indica Group]
           gi|215697420|dbj|BAG91414.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215734943|dbj|BAG95665.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|255673847|dbj|BAH91367.1| Os01g0834601 [Oryza sativa
           Japonica Group] gi|326501134|dbj|BAJ98798.1| predicted
           protein [Hordeum vulgare subsp. vulgare]
           gi|326506086|dbj|BAJ91282.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 142

 Score =  286 bits (732), Expect = 5e-75
 Identities = 139/142 (97%), Positives = 142/142 (100%)
 Frame = +3

Query: 171 MGKTRGMGAGRKLKTHRRNQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 350
           MGKTRGMGAGRKLKTHRRNQRWADK+YKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 1   MGKTRGMGAGRKLKTHRRNQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60

Query: 351 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 530
           PNSAIRKCARVQL+KNGKKIAAFVPNDGCLN+IEENDEVLIAGFGRKGHAVGDIPGVRFK
Sbjct: 61  PNSAIRKCARVQLVKNGKKIAAFVPNDGCLNFIEENDEVLIAGFGRKGHAVGDIPGVRFK 120

Query: 531 VVKVSGVSLLALFKEKKEKPRS 596
           VVKVSGVSLLALFKEKKEKPRS
Sbjct: 121 VVKVSGVSLLALFKEKKEKPRS 142


>gb|ABB16993.1| unknown [Solanum tuberosum]
          Length = 142

 Score =  285 bits (730), Expect = 8e-75
 Identities = 140/142 (98%), Positives = 141/142 (99%)
 Frame = +3

Query: 171 MGKTRGMGAGRKLKTHRRNQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 350
           MGKTRGMGAGRKLK+HRR QRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 1   MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60

Query: 351 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 530
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK
Sbjct: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 120

Query: 531 VVKVSGVSLLALFKEKKEKPRS 596
           VVKVSGVSLLALFKEKKEKPRS
Sbjct: 121 VVKVSGVSLLALFKEKKEKPRS 142


>ref|XP_004137806.1| PREDICTED: 40S ribosomal protein S23-like [Cucumis sativus]
           gi|449452122|ref|XP_004143809.1| PREDICTED: 40S
           ribosomal protein S23-like [Cucumis sativus]
           gi|449463681|ref|XP_004149560.1| PREDICTED: 40S
           ribosomal protein S23-like [Cucumis sativus]
           gi|449483351|ref|XP_004156564.1| PREDICTED: 40S
           ribosomal protein S23-like [Cucumis sativus]
           gi|449508653|ref|XP_004163373.1| PREDICTED: 40S
           ribosomal protein S23-like [Cucumis sativus]
           gi|449521770|ref|XP_004167902.1| PREDICTED: 40S
           ribosomal protein S23-like [Cucumis sativus]
          Length = 142

 Score =  284 bits (727), Expect = 2e-74
 Identities = 139/142 (97%), Positives = 141/142 (99%)
 Frame = +3

Query: 171 MGKTRGMGAGRKLKTHRRNQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 350
           MGKTRGMGAGRKLK+HRR QRWADK+YKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 1   MGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60

Query: 351 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 530
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK
Sbjct: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 120

Query: 531 VVKVSGVSLLALFKEKKEKPRS 596
           VVKVSGVSLLALFKEKKEKPRS
Sbjct: 121 VVKVSGVSLLALFKEKKEKPRS 142


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